bedtools-test 2.25.0-1 in ubuntu - xenial / universe

About

This package is 10.2 MB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/b/bedtools/bedtools-test_2.25.0-1_all.deb .

View its full control file here: debian/control.

Description

test data for the bedtools package

Relations

This package does not depend on any other package.

This package does not recommend any other package.

This package suggests: bedtools.

This package does not conflict with any other package.

Package Contents

This package is indexed.

bedtools-test 2.25.0-1 is in ubuntu - xenial / universe. This package's architecture is: architectureless.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/share/ root:root 0o755
/usr/share/bedtools/ root:root 0o755
/usr/share/bedtools/data/ root:root 0o755
/usr/share/bedtools/data/aluY.chr1.bed.gz application/gzip root:root 0o644 126.7 KB
/usr/share/bedtools/data/gerp.chr1.bed.gz application/gzip root:root 0o644 1.1 MB
/usr/share/bedtools/data/knownGene.hg18.chr21.bed text/plain root:root 0o644 119.3 KB
/usr/share/bedtools/data/knownGene.hg18.chr21.short.bed text/plain root:root 0o644 19.4 KB
/usr/share/bedtools/data/refseq.chr1.exons.bed.gz application/gzip root:root 0o644 445.6 KB
/usr/share/bedtools/data/simpleRepeats.chr1.bed.gz application/gzip root:root 0o644 600.4 KB
/usr/share/bedtools/test/ root:root 0o755
/usr/share/bedtools/test/bamtobed/ root:root 0o755
/usr/share/bedtools/test/bamtobed/one_block.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/bamtobed/test-bamtobed.sh text/x-shellscript root:root 0o755 5.4 KB
/usr/share/bedtools/test/bamtobed/three_blocks.sam text/plain root:root 0o644 176 bytes
/usr/share/bedtools/test/bamtobed/two_blocks.sam text/plain root:root 0o644 167 bytes
/usr/share/bedtools/test/bamtobed/two_blocks_w_D.sam text/plain root:root 0o644 540 bytes
/usr/share/bedtools/test/bamtofastq/ root:root 0o755
/usr/share/bedtools/test/bamtofastq/golden.fq text/plain root:root 0o644 152 bytes
/usr/share/bedtools/test/bamtofastq/golden.fq2 text/plain root:root 0o644 152 bytes
/usr/share/bedtools/test/bamtofastq/test-bamtofastq.sh text/x-shellscript root:root 0o755 313 bytes
/usr/share/bedtools/test/bamtofastq/test.sam text/plain root:root 0o644 566 bytes
/usr/share/bedtools/test/bed12tobed6/ root:root 0o755
/usr/share/bedtools/test/bed12tobed6/bed6.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/bed12tobed6/one_blocks.bed text/plain root:root 0o644 46 bytes
/usr/share/bedtools/test/bed12tobed6/test-bed12tobed6.sh text/x-shellscript root:root 0o755 1.9 KB
/usr/share/bedtools/test/bed12tobed6/three_blocks.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/bed12tobed6/two_blocks.bed text/plain root:root 0o644 52 bytes
/usr/share/bedtools/test/closest/ root:root 0o755
/usr/share/bedtools/test/closest/a2.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/closest/a.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/a.names.bed text/plain root:root 0o644 35 bytes
/usr/share/bedtools/test/closest/b2.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/b.bed text/plain root:root 0o644 11 bytes
/usr/share/bedtools/test/closest/b.names.bed text/plain root:root 0o644 36 bytes
/usr/share/bedtools/test/closest/b-one-bp-closer.bed text/plain root:root 0o644 11 bytes
/usr/share/bedtools/test/closest/bug157_a.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/closest/bug157_b.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/close-a.bed text/plain root:root 0o644 144 bytes
/usr/share/bedtools/test/closest/close-b.bed text/plain root:root 0o644 87 bytes
/usr/share/bedtools/test/closest/d4.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d.bed text/plain root:root 0o644 13 bytes
/usr/share/bedtools/test/closest/d_d1F.bed text/plain root:root 0o644 22 bytes
/usr/share/bedtools/test/closest/d_d1R.bed text/plain root:root 0o644 22 bytes
/usr/share/bedtools/test/closest/d_d2F.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d_d2R.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d_id.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/d_iu.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d_q1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/d_q2.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/kclosest/ root:root 0o755
/usr/share/bedtools/test/closest/kclosest/d1.bed text/plain root:root 0o644 77 bytes
/usr/share/bedtools/test/closest/kclosest/d2.bed text/plain root:root 0o644 196 bytes
/usr/share/bedtools/test/closest/kclosest/d3.bed text/plain root:root 0o644 390 bytes
/usr/share/bedtools/test/closest/kclosest/q1.bed text/plain root:root 0o644 13 bytes
/usr/share/bedtools/test/closest/kclosest/q2.bed text/plain root:root 0o644 46 bytes
/usr/share/bedtools/test/closest/kclosest/test-kclosest.sh text/x-shellscript root:root 0o755 21.8 KB
/usr/share/bedtools/test/closest/mdb1.bed text/plain root:root 0o644 62 bytes
/usr/share/bedtools/test/closest/mdb2.bed text/plain root:root 0o644 65 bytes
/usr/share/bedtools/test/closest/mdb3.bed text/plain root:root 0o644 21 bytes
/usr/share/bedtools/test/closest/mq1.bed text/plain root:root 0o644 19 bytes
/usr/share/bedtools/test/closest/sortAndNaming/ root:root 0o755
/usr/share/bedtools/test/closest/sortAndNaming/alpha_all.bed text/plain root:root 0o644 58 bytes
/usr/share/bedtools/test/closest/sortAndNaming/alpha_missing.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_gls.bed text/plain root:root 0o644 139 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_leadingZero.txt text/plain root:root 0o644 130 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_noChr.bed text/plain root:root 0o644 114 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_num.bed text/plain root:root 0o644 72 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db2_numBackwards.bed text/plain root:root 0o644 71 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db2_num.bed text/plain root:root 0o644 71 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db3_numBackwards.bed text/plain root:root 0o644 47 bytes
/usr/share/bedtools/test/closest/sortAndNaming/num_all.bed text/plain root:root 0o644 58 bytes
/usr/share/bedtools/test/closest/sortAndNaming/num_missing.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/sortAndNaming/q1a_num.bed text/plain root:root 0o644 130 bytes
/usr/share/bedtools/test/closest/sortAndNaming/q1_gls.bed text/plain root:root 0o644 139 bytes
/usr/share/bedtools/test/closest/sortAndNaming/q1_num.bed text/plain root:root 0o644 120 bytes
/usr/share/bedtools/test/closest/sortAndNaming/sdb1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/sortAndNaming/sq1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/sortAndNaming/test-sort-and-naming.sh text/x-shellscript root:root 0o755 10.5 KB
/usr/share/bedtools/test/closest/strand-test-a.bed text/plain root:root 0o644 21 bytes
/usr/share/bedtools/test/closest/strand-test-b.bed text/plain root:root 0o644 20 bytes
/usr/share/bedtools/test/closest/strand-test-c.bed text/plain root:root 0o644 41 bytes
/usr/share/bedtools/test/closest/strand-test-d.bed text/plain root:root 0o644 38 bytes
/usr/share/bedtools/test/closest/test-closest.sh text/x-shellscript root:root 0o755 20.0 KB
/usr/share/bedtools/test/cluster/ root:root 0o755
/usr/share/bedtools/test/cluster/in.bed text/plain root:root 0o644 264 bytes
/usr/share/bedtools/test/cluster/test-cluster.sh text/x-shellscript root:root 0o755 1.4 KB
/usr/share/bedtools/test/coverage/ root:root 0o755
/usr/share/bedtools/test/coverage/a.bed text/plain root:root 0o644 116 bytes
/usr/share/bedtools/test/coverage/b.bed text/plain root:root 0o644 396 bytes
/usr/share/bedtools/test/coverage/one_block.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/one_block.sam text/plain root:root 0o644 156 bytes
/usr/share/bedtools/test/coverage/sam-w-del.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/sam-w-del.sam text/plain root:root 0o644 142 bytes
/usr/share/bedtools/test/coverage/test-coverage.sh text/x-shellscript root:root 0o755 13.4 KB
/usr/share/bedtools/test/coverage/three_blocks.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/three_blocks_match_1bp.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/coverage/three_blocks_match.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/coverage/three_blocks_nomatch.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/coverage/three_blocks.sam text/plain root:root 0o644 171 bytes
/usr/share/bedtools/test/coverage/two_blocks.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/two_blocks.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/expand/ root:root 0o755
/usr/share/bedtools/test/expand/expand.txt text/plain root:root 0o644 52 bytes
/usr/share/bedtools/test/expand/test-expand.sh text/x-shellscript root:root 0o755 1.3 KB
/usr/share/bedtools/test/fisher/ root:root 0o755
/usr/share/bedtools/test/fisher/a.bed text/plain root:root 0o644 33 bytes
/usr/share/bedtools/test/fisher/a_merge.bed text/plain root:root 0o644 44 bytes
/usr/share/bedtools/test/fisher/b.bed text/plain root:root 0o644 22 bytes
/usr/share/bedtools/test/fisher/cmp.sh text/x-shellscript root:root 0o755 191 bytes
/usr/share/bedtools/test/fisher/plot.py text/plain root:root 0o644 1.1 KB
/usr/share/bedtools/test/fisher/README.md text/plain root:root 0o644 789 bytes
/usr/share/bedtools/test/fisher/shuf.sh text/x-shellscript root:root 0o755 958 bytes
/usr/share/bedtools/test/fisher/sim.py text/x-python root:root 0o644 978 bytes
/usr/share/bedtools/test/fisher/t.500.genome text/plain root:root 0o644 9 bytes
/usr/share/bedtools/test/fisher/t.60.genome text/plain root:root 0o644 8 bytes
/usr/share/bedtools/test/fisher/test-fisher.sh text/x-shellscript root:root 0o755 2.5 KB
/usr/share/bedtools/test/flank/ root:root 0o755
/usr/share/bedtools/test/flank/a.bed text/plain root:root 0o644 41 bytes
/usr/share/bedtools/test/flank/test-flank.sh text/x-shellscript root:root 0o755 3.8 KB
/usr/share/bedtools/test/flank/tiny.genome text/plain root:root 0o644 10 bytes
/usr/share/bedtools/test/general/ root:root 0o755
/usr/share/bedtools/test/general/empty.bed application/x-empty root:root 0o644 0 bytes
/usr/share/bedtools/test/general/non-empty.bed.gz application/gzip root:root 0o644 53 bytes
/usr/share/bedtools/test/general/test-general.sh text/x-shellscript root:root 0o755 6.5 KB
/usr/share/bedtools/test/genomecov/ root:root 0o755
/usr/share/bedtools/test/genomecov/one_block.sam text/plain root:root 0o644 156 bytes
/usr/share/bedtools/test/genomecov/sam-w-del.sam text/plain root:root 0o644 142 bytes
/usr/share/bedtools/test/genomecov/test-genomecov.sh text/x-shellscript root:root 0o755 5.5 KB
/usr/share/bedtools/test/genomecov/three_blocks_match_1bp.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/genomecov/three_blocks_match.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/genomecov/three_blocks_nomatch.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/genomecov/three_blocks.sam text/plain root:root 0o644 171 bytes
/usr/share/bedtools/test/genomecov/two_blocks.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/genomecov/y.bed text/plain root:root 0o644 30 bytes
/usr/share/bedtools/test/getfasta/ root:root 0o755
/usr/share/bedtools/test/getfasta/blocks.bed text/plain root:root 0o644 117 bytes
/usr/share/bedtools/test/getfasta/t.bed application/x-empty root:root 0o644 0 bytes
/usr/share/bedtools/test/getfasta/test-getfasta.sh text/x-shellscript root:root 0o755 2.6 KB
/usr/share/bedtools/test/getfasta/test.iupac.bed text/plain root:root 0o644 32 bytes
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/usr/share/bedtools/test/getfasta/t_fH.fa.fai text/plain root:root 0o644 43 bytes
/usr/share/bedtools/test/groupBy/ root:root 0o755
/usr/share/bedtools/test/groupBy/a_vcfSVtest.vcf text/plain root:root 0o644 884 bytes
/usr/share/bedtools/test/groupBy/gdc.bam application/gzip root:root 0o644 204 bytes
/usr/share/bedtools/test/groupBy/noPosvalues.header.bed text/plain root:root 0o644 302 bytes
/usr/share/bedtools/test/groupBy/test-groupby.sh text/x-shellscript root:root 0o755 7.5 KB
/usr/share/bedtools/test/groupBy/values3.7fields.header.bed text/plain root:root 0o644 276 bytes
/usr/share/bedtools/test/groupBy/values3_case.header.bed text/plain root:root 0o644 250 bytes
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/usr/share/bedtools/test/groupBy/values3.no_header.bed text/plain root:root 0o644 227 bytes
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/usr/share/bedtools/test/intersect/a.bam application/gzip root:root 0o644 1.7 KB
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/usr/share/bedtools/test/intersect/a_bgzipped.bed.gz application/gzip root:root 0o644 85 bytes
/usr/share/bedtools/test/intersect/a_gzipped.bed.gz application/gzip root:root 0o644 63 bytes
/usr/share/bedtools/test/intersect/a_testZeroLen.bed text/plain root:root 0o644 40 bytes
/usr/share/bedtools/test/intersect/a_vcfSVtest.vcf text/plain root:root 0o644 884 bytes
/usr/share/bedtools/test/intersect/aVSb.bam application/gzip root:root 0o644 1.7 KB
/usr/share/bedtools/test/intersect/a_with_bothUnmapped.bam application/gzip root:root 0o644 2.8 KB
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/usr/share/bedtools/test/intersect/multi_intersect/test-multi_intersect.sh text/x-shellscript root:root 0o755 11.7 KB
/usr/share/bedtools/test/intersect/new_test-intersect.sh text/x-shellscript root:root 0o755 31.1 KB
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/usr/share/bedtools/test/intersect/performanceTest.sh text/x-shellscript root:root 0o755 8.7 KB
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