bedtools-test 2.25.0-1 / usr / share / bedtools / test

This file is indexed.

/usr/share/bedtools/test/ is in bedtools-test 2.25.0-1.

This file is owned by root:root, with mode 0o755.

File Mime Type Owner Mode Size
..
/usr/share/bedtools/test/bamtobed/ root:root 0o755
/usr/share/bedtools/test/bamtobed/one_block.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/bamtobed/test-bamtobed.sh text/x-shellscript root:root 0o755 5.4 KB
/usr/share/bedtools/test/bamtobed/three_blocks.sam text/plain root:root 0o644 176 bytes
/usr/share/bedtools/test/bamtobed/two_blocks.sam text/plain root:root 0o644 167 bytes
/usr/share/bedtools/test/bamtobed/two_blocks_w_D.sam text/plain root:root 0o644 540 bytes
/usr/share/bedtools/test/bamtofastq/ root:root 0o755
/usr/share/bedtools/test/bamtofastq/golden.fq text/plain root:root 0o644 152 bytes
/usr/share/bedtools/test/bamtofastq/golden.fq2 text/plain root:root 0o644 152 bytes
/usr/share/bedtools/test/bamtofastq/test-bamtofastq.sh text/x-shellscript root:root 0o755 313 bytes
/usr/share/bedtools/test/bamtofastq/test.sam text/plain root:root 0o644 566 bytes
/usr/share/bedtools/test/bed12tobed6/ root:root 0o755
/usr/share/bedtools/test/bed12tobed6/bed6.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/bed12tobed6/one_blocks.bed text/plain root:root 0o644 46 bytes
/usr/share/bedtools/test/bed12tobed6/test-bed12tobed6.sh text/x-shellscript root:root 0o755 1.9 KB
/usr/share/bedtools/test/bed12tobed6/three_blocks.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/bed12tobed6/two_blocks.bed text/plain root:root 0o644 52 bytes
/usr/share/bedtools/test/closest/ root:root 0o755
/usr/share/bedtools/test/closest/a.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/a.names.bed text/plain root:root 0o644 35 bytes
/usr/share/bedtools/test/closest/a2.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/closest/b-one-bp-closer.bed text/plain root:root 0o644 11 bytes
/usr/share/bedtools/test/closest/b.bed text/plain root:root 0o644 11 bytes
/usr/share/bedtools/test/closest/b.names.bed text/plain root:root 0o644 36 bytes
/usr/share/bedtools/test/closest/b2.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/bug157_a.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/closest/bug157_b.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/close-a.bed text/plain root:root 0o644 144 bytes
/usr/share/bedtools/test/closest/close-b.bed text/plain root:root 0o644 87 bytes
/usr/share/bedtools/test/closest/d.bed text/plain root:root 0o644 13 bytes
/usr/share/bedtools/test/closest/d4.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d_d1F.bed text/plain root:root 0o644 22 bytes
/usr/share/bedtools/test/closest/d_d1R.bed text/plain root:root 0o644 22 bytes
/usr/share/bedtools/test/closest/d_d2F.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d_d2R.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d_id.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/d_iu.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/closest/d_q1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/d_q2.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/kclosest/ root:root 0o755
/usr/share/bedtools/test/closest/kclosest/d1.bed text/plain root:root 0o644 77 bytes
/usr/share/bedtools/test/closest/kclosest/d2.bed text/plain root:root 0o644 196 bytes
/usr/share/bedtools/test/closest/kclosest/d3.bed text/plain root:root 0o644 390 bytes
/usr/share/bedtools/test/closest/kclosest/q1.bed text/plain root:root 0o644 13 bytes
/usr/share/bedtools/test/closest/kclosest/q2.bed text/plain root:root 0o644 46 bytes
/usr/share/bedtools/test/closest/kclosest/test-kclosest.sh text/x-shellscript root:root 0o755 21.8 KB
/usr/share/bedtools/test/closest/mdb1.bed text/plain root:root 0o644 62 bytes
/usr/share/bedtools/test/closest/mdb2.bed text/plain root:root 0o644 65 bytes
/usr/share/bedtools/test/closest/mdb3.bed text/plain root:root 0o644 21 bytes
/usr/share/bedtools/test/closest/mq1.bed text/plain root:root 0o644 19 bytes
/usr/share/bedtools/test/closest/sortAndNaming/ root:root 0o755
/usr/share/bedtools/test/closest/sortAndNaming/alpha_all.bed text/plain root:root 0o644 58 bytes
/usr/share/bedtools/test/closest/sortAndNaming/alpha_missing.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_gls.bed text/plain root:root 0o644 139 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_leadingZero.txt text/plain root:root 0o644 130 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_noChr.bed text/plain root:root 0o644 114 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db1_num.bed text/plain root:root 0o644 72 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db2_num.bed text/plain root:root 0o644 71 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db2_numBackwards.bed text/plain root:root 0o644 71 bytes
/usr/share/bedtools/test/closest/sortAndNaming/db3_numBackwards.bed text/plain root:root 0o644 47 bytes
/usr/share/bedtools/test/closest/sortAndNaming/num_all.bed text/plain root:root 0o644 58 bytes
/usr/share/bedtools/test/closest/sortAndNaming/num_missing.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/closest/sortAndNaming/q1_gls.bed text/plain root:root 0o644 139 bytes
/usr/share/bedtools/test/closest/sortAndNaming/q1_num.bed text/plain root:root 0o644 120 bytes
/usr/share/bedtools/test/closest/sortAndNaming/q1a_num.bed text/plain root:root 0o644 130 bytes
/usr/share/bedtools/test/closest/sortAndNaming/sdb1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/sortAndNaming/sq1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/closest/sortAndNaming/test-sort-and-naming.sh text/x-shellscript root:root 0o755 10.5 KB
/usr/share/bedtools/test/closest/strand-test-a.bed text/plain root:root 0o644 21 bytes
/usr/share/bedtools/test/closest/strand-test-b.bed text/plain root:root 0o644 20 bytes
/usr/share/bedtools/test/closest/strand-test-c.bed text/plain root:root 0o644 41 bytes
/usr/share/bedtools/test/closest/strand-test-d.bed text/plain root:root 0o644 38 bytes
/usr/share/bedtools/test/closest/test-closest.sh text/x-shellscript root:root 0o755 20.0 KB
/usr/share/bedtools/test/cluster/ root:root 0o755
/usr/share/bedtools/test/cluster/in.bed text/plain root:root 0o644 264 bytes
/usr/share/bedtools/test/cluster/test-cluster.sh text/x-shellscript root:root 0o755 1.4 KB
/usr/share/bedtools/test/coverage/ root:root 0o755
/usr/share/bedtools/test/coverage/a.bed text/plain root:root 0o644 116 bytes
/usr/share/bedtools/test/coverage/b.bed text/plain root:root 0o644 396 bytes
/usr/share/bedtools/test/coverage/one_block.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/one_block.sam text/plain root:root 0o644 156 bytes
/usr/share/bedtools/test/coverage/sam-w-del.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/sam-w-del.sam text/plain root:root 0o644 142 bytes
/usr/share/bedtools/test/coverage/test-coverage.sh text/x-shellscript root:root 0o755 13.4 KB
/usr/share/bedtools/test/coverage/three_blocks.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/three_blocks.sam text/plain root:root 0o644 171 bytes
/usr/share/bedtools/test/coverage/three_blocks_match.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/coverage/three_blocks_match_1bp.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/coverage/three_blocks_nomatch.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/coverage/two_blocks.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/coverage/two_blocks.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/expand/ root:root 0o755
/usr/share/bedtools/test/expand/expand.txt text/plain root:root 0o644 52 bytes
/usr/share/bedtools/test/expand/test-expand.sh text/x-shellscript root:root 0o755 1.3 KB
/usr/share/bedtools/test/fisher/ root:root 0o755
/usr/share/bedtools/test/fisher/README.md text/plain root:root 0o644 789 bytes
/usr/share/bedtools/test/fisher/a.bed text/plain root:root 0o644 33 bytes
/usr/share/bedtools/test/fisher/a_merge.bed text/plain root:root 0o644 44 bytes
/usr/share/bedtools/test/fisher/b.bed text/plain root:root 0o644 22 bytes
/usr/share/bedtools/test/fisher/cmp.sh text/x-shellscript root:root 0o755 191 bytes
/usr/share/bedtools/test/fisher/plot.py text/plain root:root 0o644 1.1 KB
/usr/share/bedtools/test/fisher/shuf.sh text/x-shellscript root:root 0o755 958 bytes
/usr/share/bedtools/test/fisher/sim.py text/x-python root:root 0o644 978 bytes
/usr/share/bedtools/test/fisher/t.500.genome text/plain root:root 0o644 9 bytes
/usr/share/bedtools/test/fisher/t.60.genome text/plain root:root 0o644 8 bytes
/usr/share/bedtools/test/fisher/test-fisher.sh text/x-shellscript root:root 0o755 2.5 KB
/usr/share/bedtools/test/flank/ root:root 0o755
/usr/share/bedtools/test/flank/a.bed text/plain root:root 0o644 41 bytes
/usr/share/bedtools/test/flank/test-flank.sh text/x-shellscript root:root 0o755 3.8 KB
/usr/share/bedtools/test/flank/tiny.genome text/plain root:root 0o644 10 bytes
/usr/share/bedtools/test/general/ root:root 0o755
/usr/share/bedtools/test/general/empty.bed application/x-empty root:root 0o644 0 bytes
/usr/share/bedtools/test/general/non-empty.bed.gz application/gzip root:root 0o644 53 bytes
/usr/share/bedtools/test/general/test-general.sh text/x-shellscript root:root 0o755 6.5 KB
/usr/share/bedtools/test/genomecov/ root:root 0o755
/usr/share/bedtools/test/genomecov/one_block.sam text/plain root:root 0o644 156 bytes
/usr/share/bedtools/test/genomecov/sam-w-del.sam text/plain root:root 0o644 142 bytes
/usr/share/bedtools/test/genomecov/test-genomecov.sh text/x-shellscript root:root 0o755 5.5 KB
/usr/share/bedtools/test/genomecov/three_blocks.sam text/plain root:root 0o644 171 bytes
/usr/share/bedtools/test/genomecov/three_blocks_match.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/genomecov/three_blocks_match_1bp.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/genomecov/three_blocks_nomatch.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/genomecov/two_blocks.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/genomecov/y.bed text/plain root:root 0o644 30 bytes
/usr/share/bedtools/test/getfasta/ root:root 0o755
/usr/share/bedtools/test/getfasta/blocks.bed text/plain root:root 0o644 117 bytes
/usr/share/bedtools/test/getfasta/t.bed application/x-empty root:root 0o644 0 bytes
/usr/share/bedtools/test/getfasta/t.fa text/plain root:root 0o644 61 bytes
/usr/share/bedtools/test/getfasta/t.fa.fai text/plain root:root 0o644 16 bytes
/usr/share/bedtools/test/getfasta/t_fH.fa text/plain root:root 0o644 87 bytes
/usr/share/bedtools/test/getfasta/t_fH.fa.fai text/plain root:root 0o644 43 bytes
/usr/share/bedtools/test/getfasta/test-getfasta.sh text/x-shellscript root:root 0o755 2.6 KB
/usr/share/bedtools/test/getfasta/test.iupac.bed text/plain root:root 0o644 32 bytes
/usr/share/bedtools/test/getfasta/test.iupac.fa text/plain root:root 0o644 48 bytes
/usr/share/bedtools/test/groupBy/ root:root 0o755
/usr/share/bedtools/test/groupBy/a_vcfSVtest.vcf text/plain root:root 0o644 884 bytes
/usr/share/bedtools/test/groupBy/gdc.bam application/gzip root:root 0o644 204 bytes
/usr/share/bedtools/test/groupBy/noPosvalues.header.bed text/plain root:root 0o644 302 bytes
/usr/share/bedtools/test/groupBy/test-groupby.sh text/x-shellscript root:root 0o755 7.5 KB
/usr/share/bedtools/test/groupBy/values3.7fields.header.bed text/plain root:root 0o644 276 bytes
/usr/share/bedtools/test/groupBy/values3.header.bed text/plain root:root 0o644 250 bytes
/usr/share/bedtools/test/groupBy/values3.no_header.bed text/plain root:root 0o644 227 bytes
/usr/share/bedtools/test/groupBy/values3.unmarked_header.bed text/plain root:root 0o644 249 bytes
/usr/share/bedtools/test/groupBy/values3_case.header.bed text/plain root:root 0o644 250 bytes
/usr/share/bedtools/test/intersect/ root:root 0o755
/usr/share/bedtools/test/intersect/a.bam application/gzip root:root 0o644 1.7 KB
/usr/share/bedtools/test/intersect/a.bed text/plain root:root 0o644 38 bytes
/usr/share/bedtools/test/intersect/aVSb.bam application/gzip root:root 0o644 1.7 KB
/usr/share/bedtools/test/intersect/aWithHeaderVsB.txt text/plain root:root 0o644 198.2 KB
/usr/share/bedtools/test/intersect/a_bgzipped.bed.gz application/gzip root:root 0o644 85 bytes
/usr/share/bedtools/test/intersect/a_gzipped.bed.gz application/gzip root:root 0o644 63 bytes
/usr/share/bedtools/test/intersect/a_testZeroLen.bed text/plain root:root 0o644 40 bytes
/usr/share/bedtools/test/intersect/a_vcfSVtest.vcf text/plain root:root 0o644 884 bytes
/usr/share/bedtools/test/intersect/a_withLargeHeader.bed text/plain root:root 0o644 198.2 KB
/usr/share/bedtools/test/intersect/a_withLargeHeader_bgzipped.bed.gz application/gzip root:root 0o644 10.4 KB
/usr/share/bedtools/test/intersect/a_withLargeHeader_gzipped.bed.gz application/gzip root:root 0o644 10.1 KB
/usr/share/bedtools/test/intersect/a_with_bothUnmapped.bam application/gzip root:root 0o644 2.8 KB
/usr/share/bedtools/test/intersect/b.bed text/plain root:root 0o644 77 bytes
/usr/share/bedtools/test/intersect/b_testZeroLen.bed text/plain root:root 0o644 27 bytes
/usr/share/bedtools/test/intersect/b_vcfSVtest.vcf text/plain root:root 0o644 875 bytes
/usr/share/bedtools/test/intersect/bed3.bed text/plain root:root 0o644 11 bytes
/usr/share/bedtools/test/intersect/bed4.bed text/plain root:root 0o644 17 bytes
/usr/share/bedtools/test/intersect/bed5.bed text/plain root:root 0o644 22 bytes
/usr/share/bedtools/test/intersect/bed6.bed text/plain root:root 0o644 25 bytes
/usr/share/bedtools/test/intersect/bed6.strand.bed text/plain root:root 0o644 24 bytes
/usr/share/bedtools/test/intersect/bed6.strand2.bed text/plain root:root 0o644 48 bytes
/usr/share/bedtools/test/intersect/bedplus.bed text/plain root:root 0o644 52 bytes
/usr/share/bedtools/test/intersect/bug150_a.bed text/plain root:root 0o644 44 bytes
/usr/share/bedtools/test/intersect/bug150_b.bed text/plain root:root 0o644 79 bytes
/usr/share/bedtools/test/intersect/bug167_strandSweep.bed text/plain root:root 0o644 306 bytes
/usr/share/bedtools/test/intersect/bug187_a.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/intersect/bug187_b.bed text/plain root:root 0o644 71 bytes
/usr/share/bedtools/test/intersect/bug223_d.vcf text/plain root:root 0o644 411 bytes
/usr/share/bedtools/test/intersect/bug223_e.vcf text/plain root:root 0o644 412 bytes
/usr/share/bedtools/test/intersect/bug223_f.vcf text/plain root:root 0o644 405 bytes
/usr/share/bedtools/test/intersect/bug223_sv1_a.vcf text/plain root:root 0o644 408 bytes
/usr/share/bedtools/test/intersect/bug223_sv1_b.vcf text/plain root:root 0o644 401 bytes
/usr/share/bedtools/test/intersect/bug44_a.vcf.gz application/gzip root:root 0o644 31.7 KB
/usr/share/bedtools/test/intersect/bug44_b.bed text/plain root:root 0o644 478 bytes
/usr/share/bedtools/test/intersect/c.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/intersect/chromOrderA.bed text/plain root:root 0o644 122 bytes
/usr/share/bedtools/test/intersect/chromOrderB.bed text/plain root:root 0o644 244 bytes
/usr/share/bedtools/test/intersect/chromsOutOfOrder.bed text/plain root:root 0o644 52 bytes
/usr/share/bedtools/test/intersect/d.bed text/plain root:root 0o644 10 bytes
/usr/share/bedtools/test/intersect/dosLineCharWithExtraTab_b.bed text/plain root:root 0o644 62 bytes
/usr/share/bedtools/test/intersect/dosLineChar_a.bed text/plain root:root 0o644 72 bytes
/usr/share/bedtools/test/intersect/dummy.txt text/plain root:root 0o644 15 bytes
/usr/share/bedtools/test/intersect/e.bed text/plain root:root 0o644 12 bytes
/usr/share/bedtools/test/intersect/foo text/plain root:root 0o644 82 bytes
/usr/share/bedtools/test/intersect/gdc.bam application/gzip root:root 0o644 204 bytes
/usr/share/bedtools/test/intersect/gdc.gff text/plain root:root 0o644 746 bytes
/usr/share/bedtools/test/intersect/gdc_exp text/plain root:root 0o644 544 bytes
/usr/share/bedtools/test/intersect/gdc_one.bed text/plain root:root 0o644 13 bytes
/usr/share/bedtools/test/intersect/headerOnly.vcf text/plain root:root 0o644 9.8 KB
/usr/share/bedtools/test/intersect/human.hg19.genome text/plain root:root 0o644 1.9 KB
/usr/share/bedtools/test/intersect/human.hg19.vSort.genome text/plain root:root 0o644 1.9 KB
/usr/share/bedtools/test/intersect/j1.bed text/plain root:root 0o644 26 bytes
/usr/share/bedtools/test/intersect/mapped_and_unmapped.sam text/plain root:root 0o644 255 bytes
/usr/share/bedtools/test/intersect/multi_intersect/ root:root 0o755
/usr/share/bedtools/test/intersect/multi_intersect/d1.bed text/plain root:root 0o644 99 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d2.bed text/plain root:root 0o644 72 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d3.bed text/plain root:root 0o644 36 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d4.bed text/plain root:root 0o644 102 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d5.bed text/plain root:root 0o644 74 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d6.bed text/plain root:root 0o644 37 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d7.bed text/plain root:root 0o644 218 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d8.bed text/plain root:root 0o644 158 bytes
/usr/share/bedtools/test/intersect/multi_intersect/d9.bed text/plain root:root 0o644 90 bytes
/usr/share/bedtools/test/intersect/multi_intersect/g.bed text/plain root:root 0o644 28 bytes
/usr/share/bedtools/test/intersect/multi_intersect/query.bed text/plain root:root 0o644 135 bytes
/usr/share/bedtools/test/intersect/multi_intersect/query2.bed text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/intersect/multi_intersect/query3.bed text/plain root:root 0o644 269 bytes
/usr/share/bedtools/test/intersect/multi_intersect/test-multi_intersect.sh text/x-shellscript root:root 0o755 11.7 KB
/usr/share/bedtools/test/intersect/new_test-intersect.sh text/x-shellscript root:root 0o755 31.1 KB
/usr/share/bedtools/test/intersect/nonamecheck_a.bed text/plain root:root 0o644 11 bytes
/usr/share/bedtools/test/intersect/nonamecheck_b.bed text/plain root:root 0o644 12 bytes
/usr/share/bedtools/test/intersect/oneRecordNoNewline.bed text/plain root:root 0o644 21 bytes
/usr/share/bedtools/test/intersect/oneUnmapped.bam application/gzip root:root 0o644 2.5 KB
/usr/share/bedtools/test/intersect/one_block.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/intersect/performanceTest.sh text/x-shellscript root:root 0o755 8.7 KB
/usr/share/bedtools/test/intersect/queryUnmappedMateMappedCoordsInvalid.bam application/gzip root:root 0o644 1.0 KB
/usr/share/bedtools/test/intersect/recordsOutOfOrder.bed text/plain root:root 0o644 44 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/ root:root 0o755
/usr/share/bedtools/test/intersect/sortAndNaming/alpha_all.bed text/plain root:root 0o644 58 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/alpha_missing.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/ root:root 0o755
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/2.21_500Kvs500K.txt text/plain root:root 0o644 567.3 KB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/2.21_5v5.txt text/plain root:root 0o644 1.1 MB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/2.21_chr1.txt text/plain root:root 0o644 84.7 KB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/curr500Kvs500K.txt text/plain root:root 0o644 558.5 KB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/curr5v5.txt text/plain root:root 0o644 1.1 MB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/currChr1.txt text/plain root:root 0o644 84.7 KB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/db500K.bed text/plain root:root 0o644 17.5 MB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/dbchr1.bed text/plain root:root 0o644 1.4 MB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/diffs.txt text/plain root:root 0o644 1.4 KB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/q500K.bed text/plain root:root 0o644 17.5 MB
/usr/share/bedtools/test/intersect/sortAndNaming/bigTests/qchr1.bed text/plain root:root 0o644 1.4 MB
/usr/share/bedtools/test/intersect/sortAndNaming/db1_gls.bed text/plain root:root 0o644 139 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/db1_leadingZero.txt text/plain root:root 0o644 130 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/db1_noChr.bed text/plain root:root 0o644 114 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/db1_num.bed text/plain root:root 0o644 72 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/db2_num.bed text/plain root:root 0o644 71 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/db2_numBackwards.bed text/plain root:root 0o644 71 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/db3_numBackwards.bed text/plain root:root 0o644 47 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/diffs.txt text/plain root:root 0o644 11.9 KB
/usr/share/bedtools/test/intersect/sortAndNaming/exp1 text/plain root:root 0o644 108 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/num_all.bed text/plain root:root 0o644 58 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/num_missing.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/q1_gls.bed text/plain root:root 0o644 139 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/q1_num.bed text/plain root:root 0o644 120 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/q1a_num.bed text/plain root:root 0o644 130 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/sdb1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/sq1.bed text/plain root:root 0o644 23 bytes
/usr/share/bedtools/test/intersect/sortAndNaming/test-sort-and-naming.sh text/x-shellscript root:root 0o755 10.3 KB
/usr/share/bedtools/test/intersect/splitBug155_a.bed text/plain root:root 0o644 38 bytes
/usr/share/bedtools/test/intersect/splitBug155_b.bed text/plain root:root 0o644 38 bytes
/usr/share/bedtools/test/intersect/svlen.vcf text/plain root:root 0o644 592 bytes
/usr/share/bedtools/test/intersect/test-intersect.sh text/x-shellscript root:root 0o755 29.3 KB
/usr/share/bedtools/test/intersect/three_blocks.sam text/plain root:root 0o644 176 bytes
/usr/share/bedtools/test/intersect/three_blocks_match.bam application/gzip root:root 0o644 1.8 KB
/usr/share/bedtools/test/intersect/three_blocks_match.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/intersect/three_blocks_match_1bp.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/intersect/three_blocks_nomatch.bed text/plain root:root 0o644 63 bytes
/usr/share/bedtools/test/intersect/two_blocks.sam text/plain root:root 0o644 167 bytes
/usr/share/bedtools/test/intersect/two_blocks_partial.bam application/gzip root:root 0o644 1.8 KB
/usr/share/bedtools/test/intersect/two_blocks_partial.bam.bai application/octet-stream root:root 0o644 832 bytes
/usr/share/bedtools/test/intersect/two_blocks_partial.bed text/plain root:root 0o644 54 bytes
/usr/share/bedtools/test/intersect/x.bam application/gzip root:root 0o644 1.7 KB
/usr/share/bedtools/test/intersect/x.bed text/plain root:root 0o644 37 bytes
/usr/share/bedtools/test/intersect/y.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/jaccard/ root:root 0o755
/usr/share/bedtools/test/jaccard/a.bam application/gzip root:root 0o644 1.8 KB
/usr/share/bedtools/test/jaccard/a.bed text/plain root:root 0o644 61 bytes
/usr/share/bedtools/test/jaccard/aMixedStrands.bed text/plain root:root 0o644 233 bytes
/usr/share/bedtools/test/jaccard/b.bed text/plain root:root 0o644 77 bytes
/usr/share/bedtools/test/jaccard/bMixedStrands.bed text/plain root:root 0o644 105 bytes
/usr/share/bedtools/test/jaccard/c.bed text/plain root:root 0o644 18 bytes
/usr/share/bedtools/test/jaccard/e.bed text/plain root:root 0o644 10 bytes
/usr/share/bedtools/test/jaccard/test-jaccard.sh text/x-shellscript root:root 0o755 4.0 KB
/usr/share/bedtools/test/jaccard/three_blocks_match.bam application/gzip root:root 0o644 1.8 KB
/usr/share/bedtools/test/jaccard/three_blocks_match.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/makewindows/ root:root 0o755
/usr/share/bedtools/test/makewindows/input.bed text/plain root:root 0o644 66 bytes
/usr/share/bedtools/test/makewindows/test-makewindows.sh text/x-shellscript root:root 0o755 3.0 KB
/usr/share/bedtools/test/map/ root:root 0o755
/usr/share/bedtools/test/map/a.vsorted.bed text/plain root:root 0o644 58 bytes
/usr/share/bedtools/test/map/b.vsorted.bed text/plain root:root 0o644 33 bytes
/usr/share/bedtools/test/map/bug262_a.bed text/plain root:root 0o644 48 bytes
/usr/share/bedtools/test/map/bug262_b.bed text/plain root:root 0o644 60 bytes
/usr/share/bedtools/test/map/d.bed text/plain root:root 0o644 34 bytes
/usr/share/bedtools/test/map/fullFields.bam application/gzip root:root 0o644 25.2 KB
/usr/share/bedtools/test/map/genome text/plain root:root 0o644 30 bytes
/usr/share/bedtools/test/map/ivls.bed text/plain root:root 0o644 80 bytes
/usr/share/bedtools/test/map/ivls2.bed text/plain root:root 0o644 55 bytes
/usr/share/bedtools/test/map/t.bed text/plain root:root 0o644 11 bytes
/usr/share/bedtools/test/map/test-map.sh text/x-shellscript root:root 0o755 21.4 KB
/usr/share/bedtools/test/map/test.gff text/plain root:root 0o644 483 bytes
/usr/share/bedtools/test/map/test.vcf text/plain root:root 0o644 1.8 KB
/usr/share/bedtools/test/map/three_blocks_match.bed text/plain root:root 0o644 61 bytes
/usr/share/bedtools/test/map/three_blocks_nomatch.bed text/plain root:root 0o644 64 bytes
/usr/share/bedtools/test/map/values.bam application/gzip root:root 0o644 1.8 KB
/usr/share/bedtools/test/map/values.bed text/plain root:root 0o644 148 bytes
/usr/share/bedtools/test/map/values2.bed text/plain root:root 0o644 186 bytes
/usr/share/bedtools/test/map/values3.bed text/plain root:root 0o644 227 bytes
/usr/share/bedtools/test/map/values4.bed text/plain root:root 0o644 256 bytes
/usr/share/bedtools/test/map/values5.bed text/plain root:root 0o644 147 bytes
/usr/share/bedtools/test/merge/ root:root 0o755
/usr/share/bedtools/test/merge/a.bed text/plain root:root 0o644 46 bytes
/usr/share/bedtools/test/merge/a.full.bam application/gzip root:root 0o644 1.8 KB
/usr/share/bedtools/test/merge/a.full.bed text/plain root:root 0o644 147 bytes
/usr/share/bedtools/test/merge/a.gff text/plain root:root 0o644 297 bytes
/usr/share/bedtools/test/merge/a.names.bed text/plain root:root 0o644 57 bytes
/usr/share/bedtools/test/merge/b.bed text/plain root:root 0o644 80 bytes
/usr/share/bedtools/test/merge/bamCol10Collapse.txt text/plain root:root 0o644 21.9 KB
/usr/share/bedtools/test/merge/bamCol11Collapse.txt text/plain root:root 0o644 21.9 KB
/usr/share/bedtools/test/merge/bamCol1Collapse.txt text/plain root:root 0o644 8.5 KB
/usr/share/bedtools/test/merge/bamCol3Collapse.txt text/plain root:root 0o644 2.9 KB
/usr/share/bedtools/test/merge/bamCol4Mean.txt text/plain root:root 0o644 2.6 KB
/usr/share/bedtools/test/merge/bamCol5Mean.txt text/plain root:root 0o644 2.2 KB
/usr/share/bedtools/test/merge/bamCol6Collapse.txt text/plain root:root 0o644 2.9 KB
/usr/share/bedtools/test/merge/bamCol7Collapse.txt text/plain root:root 0o644 2.9 KB
/usr/share/bedtools/test/merge/bamCol8Mean.txt text/plain root:root 0o644 2.6 KB
/usr/share/bedtools/test/merge/bamCol9Mean.txt text/plain root:root 0o644 2.4 KB
/usr/share/bedtools/test/merge/bug254_c.bed text/plain root:root 0o644 91 bytes
/usr/share/bedtools/test/merge/bug254_d.bed text/plain root:root 0o644 99 bytes
/usr/share/bedtools/test/merge/bug254_e.bed text/plain root:root 0o644 99 bytes
/usr/share/bedtools/test/merge/expFormat.bed text/plain root:root 0o644 14 bytes
/usr/share/bedtools/test/merge/fullFields.bam application/gzip root:root 0o644 25.2 KB
/usr/share/bedtools/test/merge/mergeBugTest.bed text/plain root:root 0o644 384 bytes
/usr/share/bedtools/test/merge/mixedStrands.bed text/plain root:root 0o644 233 bytes
/usr/share/bedtools/test/merge/precisionTest.bed text/plain root:root 0o644 210 bytes
/usr/share/bedtools/test/merge/precisionTest2.bed text/plain root:root 0o644 235 bytes
/usr/share/bedtools/test/merge/test-merge.sh text/x-shellscript root:root 0o755 17.4 KB
/usr/share/bedtools/test/merge/testA.vcf text/plain root:root 0o644 17.0 KB
/usr/share/bedtools/test/merge/unsorted.bed text/plain root:root 0o644 80 bytes
/usr/share/bedtools/test/merge/vcfSVtest.vcf text/plain root:root 0o644 884 bytes
/usr/share/bedtools/test/multicov/ root:root 0o755
/usr/share/bedtools/test/multicov/multicov.bed text/plain root:root 0o644 72 bytes
/usr/share/bedtools/test/multicov/one_block.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/multicov/one_block.sam text/plain root:root 0o644 162 bytes
/usr/share/bedtools/test/multicov/test-multicov.sh text/x-shellscript root:root 0o755 3.8 KB
/usr/share/bedtools/test/multicov/two_blocks.bam.bai application/octet-stream root:root 0o644 96 bytes
/usr/share/bedtools/test/multicov/two_blocks.sam text/plain root:root 0o644 167 bytes
/usr/share/bedtools/test/reldist/ root:root 0o755
/usr/share/bedtools/test/reldist/test-reldist.sh text/x-shellscript root:root 0o755 3.5 KB
/usr/share/bedtools/test/sample/ root:root 0o755
/usr/share/bedtools/test/sample/human.hg19.genome text/plain root:root 0o644 1.9 KB
/usr/share/bedtools/test/sample/test-sample.sh text/x-shellscript root:root 0o755 3.9 KB
/usr/share/bedtools/test/shuffle/ root:root 0o755
/usr/share/bedtools/test/shuffle/excl.bed text/plain root:root 0o644 178 bytes
/usr/share/bedtools/test/shuffle/incl.bed text/plain root:root 0o644 159 bytes
/usr/share/bedtools/test/shuffle/simrep.bed text/plain root:root 0o644 27.0 KB
/usr/share/bedtools/test/shuffle/test-shuffle.sh text/x-shellscript root:root 0o755 3.6 KB
/usr/share/bedtools/test/slop/ root:root 0o755
/usr/share/bedtools/test/slop/a.bed text/plain root:root 0o644 41 bytes
/usr/share/bedtools/test/slop/test-slop.sh text/x-shellscript root:root 0o755 4.8 KB
/usr/share/bedtools/test/slop/tiny.genome text/plain root:root 0o644 10 bytes
/usr/share/bedtools/test/sort/ root:root 0o755
/usr/share/bedtools/test/sort/a.bed text/plain root:root 0o644 206 bytes
/usr/share/bedtools/test/sort/names.txt text/plain root:root 0o644 15 bytes
/usr/share/bedtools/test/sort/test-sort.sh text/x-shellscript root:root 0o755 3.9 KB
/usr/share/bedtools/test/spacing/ root:root 0o755
/usr/share/bedtools/test/spacing/a.bed text/plain root:root 0o644 97 bytes
/usr/share/bedtools/test/spacing/test-spacing.sh text/x-shellscript root:root 0o755 466 bytes
/usr/share/bedtools/test/split/ root:root 0o755
/usr/share/bedtools/test/split/exp text/plain root:root 0o644 250 bytes
/usr/share/bedtools/test/split/test-split.sh text/x-shellscript root:root 0o755 1.6 KB
/usr/share/bedtools/test/subtract/ root:root 0o755
/usr/share/bedtools/test/subtract/a.bed text/plain root:root 0o644 36 bytes
/usr/share/bedtools/test/subtract/b.bed text/plain root:root 0o644 36 bytes
/usr/share/bedtools/test/subtract/b2.bed text/plain root:root 0o644 21 bytes
/usr/share/bedtools/test/subtract/c.bed text/plain root:root 0o644 10 bytes
/usr/share/bedtools/test/subtract/d.bed text/plain root:root 0o644 27 bytes
/usr/share/bedtools/test/subtract/test-subtract.sh text/x-shellscript root:root 0o755 6.6 KB
/usr/share/bedtools/test/test.sh text/x-shellscript root:root 0o755 1.8 KB

APT Browse - Built by Thomas Orozco.