/usr/share/bedtools/test/intersect/human.hg19.genome is in bedtools-test 2.25.0-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 | chr1 249250621
chr10 135534747
chr11 135006516
chr11_gl000202_random 40103
chr12 133851895
chr13 115169878
chr14 107349540
chr15 102531392
chr16 90354753
chr17 81195210
chr17_ctg5_hap1 1680828
chr17_gl000203_random 37498
chr17_gl000204_random 81310
chr17_gl000205_random 174588
chr17_gl000206_random 41001
chr18 78077248
chr18_gl000207_random 4262
chr19 59128983
chr19_gl000208_random 92689
chr19_gl000209_random 159169
chr1_gl000191_random 106433
chr1_gl000192_random 547496
chr2 243199373
chr20 63025520
chr21 48129895
chr21_gl000210_random 27682
chr22 51304566
chr3 198022430
chr4 191154276
chr4_ctg9_hap1 590426
chr4_gl000193_random 189789
chr4_gl000194_random 191469
chr5 180915260
chr6 171115067
chr6_apd_hap1 4622290
chr6_cox_hap2 4795371
chr6_dbb_hap3 4610396
chr6_mann_hap4 4683263
chr6_mcf_hap5 4833398
chr6_qbl_hap6 4611984
chr6_ssto_hap7 4928567
chr7 159138663
chr7_gl000195_random 182896
chr8 146364022
chr8_gl000196_random 38914
chr8_gl000197_random 37175
chr9 141213431
chr9_gl000198_random 90085
chr9_gl000199_random 169874
chr9_gl000200_random 187035
chr9_gl000201_random 36148
chrM 16571
chrUn_gl000211 166566
chrUn_gl000212 186858
chrUn_gl000213 164239
chrUn_gl000214 137718
chrUn_gl000215 172545
chrUn_gl000216 172294
chrUn_gl000217 172149
chrUn_gl000218 161147
chrUn_gl000219 179198
chrUn_gl000220 161802
chrUn_gl000221 155397
chrUn_gl000222 186861
chrUn_gl000223 180455
chrUn_gl000224 179693
chrUn_gl000225 211173
chrUn_gl000226 15008
chrUn_gl000227 128374
chrUn_gl000228 129120
chrUn_gl000229 19913
chrUn_gl000230 43691
chrUn_gl000231 27386
chrUn_gl000232 40652
chrUn_gl000233 45941
chrUn_gl000234 40531
chrUn_gl000235 34474
chrUn_gl000236 41934
chrUn_gl000237 45867
chrUn_gl000238 39939
chrUn_gl000239 33824
chrUn_gl000240 41933
chrUn_gl000241 42152
chrUn_gl000242 43523
chrUn_gl000243 43341
chrUn_gl000244 39929
chrUn_gl000245 36651
chrUn_gl000246 38154
chrUn_gl000247 36422
chrUn_gl000248 39786
chrUn_gl000249 38502
chrX 155270560
chrY 59373566
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