/usr/share/gmod/chado/bin/ is in chado-utils 1.31-3.
This file is owned by root:root, with mode 0o755.
..
/usr/share/gmod/chado/bin/GMODCallHome.pl
/usr/share/gmod/chado/bin/Skip_tables.pm
/usr/share/gmod/chado/bin/addcascades
/usr/share/gmod/chado/bin/chado-build-schema.pl
/usr/share/gmod/chado/bin/chado-fix-flybase-instance.pl
/usr/share/gmod/chado/bin/create-bridge-sql.pl
/usr/share/gmod/chado/bin/create-so-bridge.pl
/usr/share/gmod/chado/bin/create_so_bridge_command
/usr/share/gmod/chado/bin/dbi.tt2
/usr/share/gmod/chado/bin/ddltrans
/usr/share/gmod/chado/bin/gencode2sql.pl
/usr/share/gmod/chado/bin/gmod_add_organism.pl
/usr/share/gmod/chado/bin/gmod_apollo_triggers.pl
/usr/share/gmod/chado/bin/gmod_bulk_load_gff3.pl
/usr/share/gmod/chado/bin/gmod_bulk_load_pubmed.pl
/usr/share/gmod/chado/bin/gmod_bulkfiles.pl
/usr/share/gmod/chado/bin/gmod_dump_gff3.pl
/usr/share/gmod/chado/bin/gmod_extract_dbxref_from_gff.pl
/usr/share/gmod/chado/bin/gmod_fasta2gff3.pl
/usr/share/gmod/chado/bin/gmod_gff2biomart5.pl
/usr/share/gmod/chado/bin/gmod_gff3_preprocessor.pl
/usr/share/gmod/chado/bin/gmod_load_cvterms.pl
/usr/share/gmod/chado/bin/gmod_make_cvtermpath.pl
/usr/share/gmod/chado/bin/gmod_make_gff_from_dbxref.pl
/usr/share/gmod/chado/bin/gmod_materialized_view_tool.pl
/usr/share/gmod/chado/bin/gmod_sort_gff3.pl
/usr/share/gmod/chado/bin/gmod_update_chado.pl
/usr/share/gmod/chado/bin/interactions2SIF.pl
/usr/share/gmod/chado/bin/load_ncbi_taxonomy.pl
/usr/share/gmod/chado/bin/load_taxonomy_cvterms.pl
/usr/share/gmod/chado/bin/make_cvtermpath.pl
/usr/share/gmod/chado/bin/make_cvtermpath.sh
/usr/share/gmod/chado/bin/make_partial_indexes.pl
/usr/share/gmod/chado/bin/pg2cdbi.pl
/usr/share/gmod/chado/bin/pg2cdbi_viaTT.pl
/usr/share/gmod/chado/bin/pg2diagram.pl
/usr/share/gmod/chado/bin/pg2graphviz.pl
/usr/share/gmod/chado/bin/pg2graphviz_svg.pl
/usr/share/gmod/chado/bin/pg2html.pl
/usr/share/gmod/chado/bin/privileges.tmpl
/usr/share/gmod/chado/bin/ucsc_genes2gff.pl
/usr/share/gmod/chado/bin/ucsc_snp2gff.pl