This package is 55.7 KB.
It is available at http://archive.ubuntu.com/ubuntu/pool/universe/t/transdecoder/transdecoder_2.0.1+dfsg-2_all.deb
.
View its full control file here:
debian/control
.
find coding regions within RNA transcript sequences
This package depends on:
perl, cd-hit, liburi-perl
.
This package does not recommend any other package.
This package does not suggest any other package.
This package does not conflict with any other package.
transdecoder 2.0.1+dfsg-2 is in ubuntu - xenial / universe. This package's architecture is: architectureless.
File | Mime Type | Owner | Mode | Size |
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/usr/
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root:root | 0o755 | ||
/usr/bin/
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root:root | 0o755 | ||
/usr/bin/TransDecoder.LongOrfs
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root:root | 0o777 | ||
/usr/bin/TransDecoder.Predict
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root:root | 0o777 | ||
/usr/lib/
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root:root | 0o755 | ||
/usr/lib/transdecoder/
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root:root | 0o755 | ||
/usr/lib/transdecoder/PerlLib/
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root:root | 0o755 | ||
/usr/lib/transdecoder/PerlLib/Fasta_reader.pm
|
text/x-perl | root:root | 0o755 | 3.4 KB |
/usr/lib/transdecoder/PerlLib/Gene_obj_indexer.pm
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text/x-perl | root:root | 0o755 | 1.3 KB |
/usr/lib/transdecoder/PerlLib/Gene_obj.pm
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text/x-perl | root:root | 0o755 | 139.0 KB |
/usr/lib/transdecoder/PerlLib/GFF3_utils.pm
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text/x-perl | root:root | 0o644 | 8.2 KB |
/usr/lib/transdecoder/PerlLib/Longest_orf.pm
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text/x-perl | root:root | 0o755 | 9.5 KB |
/usr/lib/transdecoder/PerlLib/Nuc_translator.pm
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text/x-perl | root:root | 0o755 | 10.1 KB |
/usr/lib/transdecoder/PerlLib/TiedHash.pm
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text/x-perl | root:root | 0o755 | 3.6 KB |
/usr/lib/transdecoder/TransDecoder.LongOrfs
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text/x-perl | root:root | 0o755 | 8.0 KB |
/usr/lib/transdecoder/TransDecoder.Predict
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text/x-perl | root:root | 0o755 | 9.8 KB |
/usr/lib/transdecoder/util/
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root:root | 0o755 | ||
/usr/lib/transdecoder/util/bin/
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root:root | 0o755 | ||
/usr/lib/transdecoder/util/bin/.hidden
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application/x-empty | root:root | 0o644 | 0 bytes |
/usr/lib/transdecoder/util/cdna_alignment_orf_to_genome_orf.pl
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text/x-perl | root:root | 0o755 | 8.8 KB |
/usr/lib/transdecoder/util/compute_base_probs.pl
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text/x-perl | root:root | 0o755 | 1.3 KB |
/usr/lib/transdecoder/util/cufflinks_gtf_genome_to_cdna_fasta.pl
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text/x-perl | root:root | 0o755 | 2.4 KB |
/usr/lib/transdecoder/util/cufflinks_gtf_to_alignment_gff3.pl
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text/x-perl | root:root | 0o755 | 1.9 KB |
/usr/lib/transdecoder/util/cufflinks_gtf_to_bed.pl
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text/x-perl | root:root | 0o755 | 1.9 KB |
/usr/lib/transdecoder/util/ffindex_resume.pl
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text/x-perl | root:root | 0o755 | 1012 bytes |
/usr/lib/transdecoder/util/gene_list_to_gff.pl
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text/x-perl | root:root | 0o755 | 864 bytes |
/usr/lib/transdecoder/util/get_top_longest_fasta_entries.pl
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text/x-perl | root:root | 0o755 | 746 bytes |
/usr/lib/transdecoder/util/gff3_file_to_bed.pl
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text/x-perl | root:root | 0o755 | 901 bytes |
/usr/lib/transdecoder/util/gff3_file_to_proteins.pl
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text/x-perl | root:root | 0o755 | 4.7 KB |
/usr/lib/transdecoder/util/index_gff3_files_by_isoform.pl
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text/x-perl | root:root | 0o755 | 2.0 KB |
/usr/lib/transdecoder/util/nr_ORFs_gff3.pl
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text/x-perl | root:root | 0o755 | 1.6 KB |
/usr/lib/transdecoder/util/pfam_mpi.pbs
|
text/x-shellscript | root:root | 0o755 | 950 bytes |
/usr/lib/transdecoder/util/pfam_runner.pl
|
text/x-perl | root:root | 0o755 | 9.0 KB |
/usr/lib/transdecoder/util/remove_eclipsed_ORFs.pl
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text/x-perl | root:root | 0o755 | 2.3 KB |
/usr/lib/transdecoder/util/score_CDS_liklihood_all_6_frames.pl
|
text/x-perl | root:root | 0o755 | 1.9 KB |
/usr/lib/transdecoder/util/seq_n_baseprobs_to_logliklihood_vals.pl
|
text/x-perl | root:root | 0o755 | 3.8 KB |
/usr/share/
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root:root | 0o755 | ||
/usr/share/doc/
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root:root | 0o755 | ||
/usr/share/doc/transdecoder/
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root:root | 0o755 | ||
/usr/share/doc/transdecoder/changelog.Debian.gz
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application/gzip | root:root | 0o644 | 355 bytes |
/usr/share/doc/transdecoder/copyright
|
text/plain | root:root | 0o644 | 1.8 KB |
/usr/share/man/
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root:root | 0o755 | ||
/usr/share/man/man1/
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root:root | 0o755 | ||
/usr/share/man/man1/TransDecoder.LongOrfs.1.gz
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application/gzip | root:root | 0o644 | 2.2 KB |
/usr/share/man/man1/TransDecoder.Predict.1.gz
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application/gzip | root:root | 0o644 | 2.1 KB |