/usr/share/bedtools/test/test.sh is in bedtools 2.17.0-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 | echo " Performing general tests:"
cd general; sh test-general.sh; cd ..
echo " Testing bedtools bed12tobed6:"
cd bed12tobed6; sh test-bed12tobed6.sh; cd ..
echo " Testing bedtools bamtobed:"
cd bamtobed; sh test-bamtobed.sh; cd ..
echo " Testing bedtools closest:"
cd closest; sh test-closest.sh; cd ..
echo " Testing bedtools cluster:"
cd cluster; sh test-cluster.sh; cd ..
echo " Testing bedtools coverage:"
cd coverage; sh test-coverage.sh; cd ..
echo " Testing bedtools expand:"
cd expand; sh test-expand.sh; cd ..
echo " Testing bedtools flank:"
cd flank; sh test-flank.sh; cd ..
echo " Testing bedtools genomecov:"
cd genomecov; sh test-genomecov.sh; cd ..
echo " Testing bedtools getfasta:"
cd getfasta; sh test-getfasta.sh; cd ..
echo " Testing bedtools intersect:"
cd intersect; sh test-intersect.sh; cd ..
echo " Testing bedtools jaccard:"
cd jaccard; sh test-jaccard.sh; cd ..
echo " Testing bedtools map:"
cd map; sh test-map.sh; cd ..
echo " Testing bedtools merge:"
cd merge; sh test-merge.sh; cd ..
echo " Testing bedtools multicov:"
cd multicov; sh test-multicov.sh; cd ..
echo " Testing bedtools slop:"
cd slop; sh test-slop.sh; cd ..
echo " Testing bedtools subtract:"
cd subtract; sh test-subtract.sh; cd ..
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