About

This package is 1.6 MB. It is available at http://ftp.debian.org/debian/pool/main/r/r-bioc-deseq2/r-bioc-deseq2_1.14.1-1_amd64.deb .

View its full control file here: debian/control.

Description

R package for RNA-Seq Differential Expression Analysis

Relations

This package does not recommend any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

r-bioc-deseq2 1.14.1-1 is in debian - stretch / main. This package's architecture is: amd64.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/lib/ root:root 0o755
/usr/lib/R/ root:root 0o755
/usr/lib/R/site-library/ root:root 0o755
/usr/lib/R/site-library/DESeq2/ root:root 0o755
/usr/lib/R/site-library/DESeq2/CITATION text/plain root:root 0o644 705 bytes
/usr/lib/R/site-library/DESeq2/DESCRIPTION text/plain root:root 0o644 1.1 KB
/usr/lib/R/site-library/DESeq2/doc/ root:root 0o755
/usr/lib/R/site-library/DESeq2/doc/DESeq2.pdf application/pdf root:root 0o644 656.5 KB
/usr/lib/R/site-library/DESeq2/doc/DESeq2.R text/plain root:root 0o644 22.4 KB
/usr/lib/R/site-library/DESeq2/doc/DESeq2.Rnw text/x-tex root:root 0o644 110.9 KB
/usr/lib/R/site-library/DESeq2/doc/index.html text/html root:root 0o644 1.3 KB
/usr/lib/R/site-library/DESeq2/help/ root:root 0o755
/usr/lib/R/site-library/DESeq2/help/aliases.rds application/gzip root:root 0o644 776 bytes
/usr/lib/R/site-library/DESeq2/help/AnIndex text/plain root:root 0o644 2.6 KB
/usr/lib/R/site-library/DESeq2/help/DESeq2.rdb application/octet-stream root:root 0o644 116.3 KB
/usr/lib/R/site-library/DESeq2/help/DESeq2.rdx application/gzip root:root 0o644 1.0 KB
/usr/lib/R/site-library/DESeq2/help/paths.rds application/gzip root:root 0o644 480 bytes
/usr/lib/R/site-library/DESeq2/html/ root:root 0o755
/usr/lib/R/site-library/DESeq2/html/00Index.html text/html root:root 0o644 12.1 KB
/usr/lib/R/site-library/DESeq2/html/R.css text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/DESeq2/INDEX text/plain root:root 0o644 3.2 KB
/usr/lib/R/site-library/DESeq2/libs/ root:root 0o755
/usr/lib/R/site-library/DESeq2/libs/DESeq2.so application/x-sharedlib root:root 0o644 175.8 KB
/usr/lib/R/site-library/DESeq2/Meta/ root:root 0o755
/usr/lib/R/site-library/DESeq2/Meta/hsearch.rds application/gzip root:root 0o644 1.8 KB
/usr/lib/R/site-library/DESeq2/Meta/links.rds application/gzip root:root 0o644 964 bytes
/usr/lib/R/site-library/DESeq2/Meta/nsInfo.rds application/gzip root:root 0o644 1.1 KB
/usr/lib/R/site-library/DESeq2/Meta/package.rds application/gzip root:root 0o644 1.3 KB
/usr/lib/R/site-library/DESeq2/Meta/Rd.rds application/gzip root:root 0o644 1.9 KB
/usr/lib/R/site-library/DESeq2/Meta/vignette.rds application/gzip root:root 0o644 231 bytes
/usr/lib/R/site-library/DESeq2/NAMESPACE text/plain root:root 0o644 3.1 KB
/usr/lib/R/site-library/DESeq2/NEWS text/plain root:root 0o644 18.4 KB
/usr/lib/R/site-library/DESeq2/R/ root:root 0o755
/usr/lib/R/site-library/DESeq2/R/DESeq2 text/plain root:root 0o644 1.0 KB
/usr/lib/R/site-library/DESeq2/R/DESeq2.rdb application/octet-stream root:root 0o644 206.5 KB
/usr/lib/R/site-library/DESeq2/R/DESeq2.rdx application/gzip root:root 0o644 3.0 KB
/usr/lib/R/site-library/DESeq2/script/ root:root 0o755
/usr/lib/R/site-library/DESeq2/script/makeSim.R text/plain root:root 0o644 415 bytes
/usr/lib/R/site-library/DESeq2/script/runScripts.R text/plain root:root 0o644 6.9 KB
/usr/lib/R/site-library/DESeq2/script/simulateCluster.R text/plain root:root 0o644 2.6 KB
/usr/lib/R/site-library/DESeq2/script/simulateDE.R text/plain root:root 0o644 2.4 KB
/usr/lib/R/site-library/DESeq2/script/simulateLFCAccuracy.R text/plain root:root 0o644 2.2 KB
/usr/lib/R/site-library/DESeq2/script/simulateOutliers.R text/plain root:root 0o644 3.5 KB
/usr/lib/R/site-library/DESeq2/script/simulation.pdf application/pdf root:root 0o644 384.8 KB
/usr/lib/R/site-library/DESeq2/script/simulation.Rmd text/plain root:root 0o644 18.2 KB
/usr/lib/R/site-library/DESeq2/script/testsuite.Rmd text/plain root:root 0o644 4.9 KB
/usr/lib/R/site-library/DESeq2/script/vst.nb text/plain root:root 0o644 34.5 KB
/usr/lib/R/site-library/DESeq2/script/vst.pdf application/pdf root:root 0o644 182.0 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/r-bioc-deseq2/ root:root 0o755
/usr/share/doc/r-bioc-deseq2/changelog.Debian.gz application/gzip root:root 0o644 421 bytes
/usr/share/doc/r-bioc-deseq2/copyright text/plain root:root 0o644 1.2 KB
/usr/share/doc/r-bioc-deseq2/examples/ root:root 0o755
/usr/share/doc/r-bioc-deseq2/examples/vignettes/ root:root 0o755
/usr/share/doc/r-bioc-deseq2/examples/vignettes/DESeq2.Rnw.gz application/gzip root:root 0o644 35.4 KB
/usr/share/doc/r-bioc-deseq2/examples/vignettes/library.bib.gz application/gzip root:root 0o644 3.9 KB
/usr/share/doc/r-bioc-deseq2/README.test text/plain root:root 0o644 262 bytes
/usr/share/doc/r-bioc-deseq2/run-unit-test text/x-shellscript root:root 0o644 314 bytes
/usr/share/doc/r-bioc-deseq2/tests/ root:root 0o755
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/usr/share/doc/r-bioc-deseq2/tests/testthat/test_1vs1.R text/plain root:root 0o644 100 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_addMLE.R text/plain root:root 0o644 692 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_betaFitting.R text/plain root:root 0o644 1.5 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_collapse.R text/plain root:root 0o644 262 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_construction_errors.R text/plain root:root 0o644 1.9 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_counts_input.R text/plain root:root 0o644 520 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_custom_filt.R text/plain root:root 0o644 761 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_DESeq.R text/plain root:root 0o644 595 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_dispersions.R text/plain root:root 0o644 975 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_disp_fit.R.gz application/gzip root:root 0o644 1.6 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_edge_case.R text/plain root:root 0o644 1.1 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_factors.R text/plain root:root 0o644 342 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_fpkm.R text/plain root:root 0o644 304 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_frozen_transform.R text/plain root:root 0o644 923 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_htseq.R text/plain root:root 0o644 354 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_interactions.R text/plain root:root 0o644 296 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_linear_mu.R text/plain root:root 0o644 711 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_LRT_prior.R text/plain root:root 0o644 479 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_LRT.R text/plain root:root 0o644 325 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_methods.R text/plain root:root 0o644 380 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_model_matrix.R text/plain root:root 0o644 1.1 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_nbinomWald.R text/plain root:root 0o644 942 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_optim.R text/plain root:root 0o644 1.8 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_outlier.R text/plain root:root 0o644 2.5 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_parallel.R text/plain root:root 0o644 2.3 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_plots.R text/plain root:root 0o644 699 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_QR.R text/plain root:root 0o644 242 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_results.R.gz application/gzip root:root 0o644 1.3 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_rlog.R text/plain root:root 0o644 713 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_size_factor.R text/plain root:root 0o644 802 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_tximport.R text/plain root:root 0o644 632 bytes
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_vst.R text/plain root:root 0o644 1.1 KB
/usr/share/doc/r-bioc-deseq2/tests/testthat/test_zero_zero.R text/plain root:root 0o644 755 bytes