/usr/share/xdrawchem2/lysine.cml is in xdrawchem 2.0-4.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 | <?xml version="1.0" encoding="ISO-8859-1"?>
<!DOCTYPE molecule SYSTEM "cml.dtd" []>
<molecule id="lysine.cml" convention="CML-1999-05-15">
<string title="GenerationDate">Fri May 25 18:06:00 2001</string>
<string title="GenerationSoftware">XDrawChem 0.9</string>
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<string builtin="elementType">H2N</string>
<coordinate2 builtin="xy2">143 293</coordinate2>
<integer builtin="formalCharge">0</integer>
</atom>
<atom id="a1">
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</atom>
<atom id="a2">
<string builtin="elementType">C</string>
<coordinate2 builtin="xy2">229.603 293</coordinate2>
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</atom>
<atom id="a3">
<string builtin="elementType">C</string>
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</atom>
<atom id="a4">
<string builtin="elementType">O</string>
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</atom>
<atom id="a5">
<string builtin="elementType">OH</string>
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</atom>
<atom id="a6">
<string builtin="elementType">C</string>
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</atom>
<atom id="a7">
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</atom>
<atom id="a8">
<string builtin="elementType">C</string>
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<integer builtin="formalCharge">0</integer>
</atom>
<atom id="a9">
<string builtin="elementType">NH3+</string>
<coordinate2 builtin="xy2">186.301 76.5786</coordinate2>
<integer builtin="formalCharge">0</integer>
</atom>
<bond id="b0" atomRefs="a0 a1">
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</bond>
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</molecule>
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