/usr/lib/R/site-library/MALDIquant/INDEX is in r-cran-maldiquant 1.12-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 | AbstractMassObject-class
Class "AbstractMassObject"
MALDIquant-package Quantitative Analysis of Mass Spectrometry Data
MALDIquant-parallel Parallel Support in Package 'MALDIquant'
MassPeaks-class Class "MassPeaks"
MassSpectrum-class Class "MassSpectrum"
alignSpectra Align MassSpectrum objects.
averageMassSpectra Averages 'MassSpectrum' objects.
binPeaks Align Peaks into discrete bins.
calibrateIntensity Calibrates intensities of a MassSpectrum
object.
createMassPeaks Creates a MassPeaks object.
createMassSpectrum Creates a MassSpectrum object.
detectPeaks Detects peaks in a MassSpectrum object.
determineWarpingFunctions
Determine warping functions of MassPeaks
objects.
estimateBaseline Estimates the baseline of a MassSpectrum
object.
estimateNoise Estimates the noise of a MassSpectrum object.
fiedler2009subset Example Mass Spectra (raw)
filterPeaks Removes less frequent peaks.
findEmptyMassObjects Finds or removes empty AbstractMassObject
objects in a list.
intensityMatrix Converts a list of MassPeaks objects into a
matrix.
isMassSpectrum Tests for MassSpectrum or MassPeaks object.
isMassSpectrumList Tests a list of MassSpectrum or MassPeaks
objects.
labelPeaks Draws peak labels to plot.
mergeMassPeaks Merges 'MassPeaks' objects.
msiSlices Turn a list of AbstractMassObjects into a mass
spectrometry imaging slice.
plot,AbstractMassObject,missing-method
Plots an AbstractMassObject object.
plotMsiSlice Plots a Mass Spectrometry Imaging dataset.
referencePeaks Creates a reference 'MassPeaks' object.
removeBaseline Removes the baseline of a MassSpectrum object.
smoothIntensity Smoothes intensities of a MassSpectrum object.
transformIntensity Transforms intensities of an AbstractMassObject
object.
trim Trim an AbstractMassObject object.
warpMassSpectra Run warping functions on AbstractMassObject
objects.
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