This file is indexed.

/usr/include/trilinos/Thyra_DefaultColumnwiseMultiVector_decl.hpp is in libtrilinos-thyra-dev 12.4.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
// @HEADER
// ***********************************************************************
// 
//    Thyra: Interfaces and Support for Abstract Numerical Algorithms
//                 Copyright (2004) Sandia Corporation
// 
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
// 
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Roscoe A. Bartlett (bartlettra@ornl.gov) 
// 
// ***********************************************************************
// @HEADER

#ifndef THYRA_DEFAULT_COLUMNWISE_MULTI_VECTOR_DECL_HPP
#define THYRA_DEFAULT_COLUMNWISE_MULTI_VECTOR_DECL_HPP

#include "Thyra_MultiVectorDefaultBase_decl.hpp"
#include "Thyra_VectorSpaceBase_decl.hpp"
#include "Thyra_VectorBase.hpp"


namespace Thyra {


/** \brief Default subclass for <tt>MultiVectorBase</tt> implemented using columns
 * of separate abstract vectors.
 *
 * This is a very bad implementation of a multi-vector but this will
 * work in situations where you need a multi-vector but some
 * underlying linear algebra library does not directly support them.
 *
 * This subclass can be used to represent a <tt>%MultiVectorBase</tt>
 * wrapper around a single <tt>VectorBase</tt> object so that a single
 * vector can be passed to a method that expects a <tt>%MultiVectorBase</tt>
 * object.
 */
template<class Scalar>
class DefaultColumnwiseMultiVector : virtual public MultiVectorDefaultBase<Scalar>
{
public:

  /** @name Constructors/Initializers */
  //@{

  /** \brief Construct to initialized.
   *
   * Postconditions:<ul>
   * <tt> <tt>this->range().get() == NULL</tt>
   * <tt> <tt>this->domain().get() == NULL</tt>
   * </ul>
   */
  DefaultColumnwiseMultiVector();

  /** \brief Calls <tt>initialize()</tt>. */
  DefaultColumnwiseMultiVector(
    const RCP<VectorBase<Scalar> > &col_vec
    );

  /** \brief Calls <tt>initialize()</tt>. */
  DefaultColumnwiseMultiVector(
    const RCP<const VectorSpaceBase<Scalar> > &range,
    const RCP<const VectorSpaceBase<Scalar> > &domain,
    const ArrayView<const RCP<VectorBase<Scalar> > > &col_vecs = Teuchos::null
    );
  
  /** \brief Initialize given a single vector object.
   *
   * \param col_vec [in] A single column vector.  It is not allowed for
   * <tt>col_vecs==NULL</tt>.
   *
   * Preconditions:<ul>
   * <li> <tt>col_vec.get() != NULL</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> <tt>col_vec->dim() > 0</tt> (throw <tt>std::invalid_argument</tt>)
   * </ul>
   *
   * Postconditions:<ul>
   * <tt> <tt>this->range().get() == col_vec.space().get()</tt>
   * <tt> <tt>this->domain()->dim() == 1</tt>
   * <li> <tt>this->col(0).get() == col_vec.get()</tt>
   * </ul>
   */
  void initialize(
    const RCP<VectorBase<Scalar> > &col_vec
    );

  /** \brief Initialize given the spaces for the columns and rows and possibly
   * the column vectors.
   *
   * \param range [in] The space that the columns must lie in.  The underlying
   * vector space must not be changed while <tt>this</tt> is in use.
   *
   * \param domain [in] The space that the rows must lie in.  The underlying
   * vector space must not be changed while <tt>this</tt> is in use.  What
   * this argument really specifies is what vector type will be compatible
   * with the vectors that the client may try to use to interact with the rows
   * of this multivector.
   *
   * \param col_vecs [in] Array (size <tt>domain->dim()</tt>) of column
   * vectors to use for the columns of <tt>this</tt>.  It is allowed for
   * <tt>col_vecs==NULL</tt> in which case <tt>range->createMember()</tt> will
   * be used to create the columns of <tt>this</tt>.
   *
   * Preconditions:<ul>
   * <li> <tt>range.get() != NULL</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> <tt>domain.get() != NULL</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> <tt>range->dim() > 0</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> <tt>domain->dim() > 0</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> [<tt>col_vecs != NULL</tt>]
   *      <tt>col_vecs[j].get() != NULL &&
   *        col_vecs[j]->space()->is_compatible(*range) == true</tt>,
   *      for <tt>j=0..domain->dim()-1</tt>
   * </ul>
   *
   * Postconditions:<ul>
   * <tt> <tt>this->range().get() == range.get()</tt>
   * <tt> <tt>this->domain().get() == domain.get()</tt>
   * <li> [<tt>col_vecs != NULL</tt>] 
   *        <tt>this->col(j).get() == col_vecs[j].get()</tt>,
   *        for <tt>j=0..domain->dim()-1</tt>
   * </ul>
   */
  void initialize(
    const RCP<const VectorSpaceBase<Scalar> > &range,
    const RCP<const VectorSpaceBase<Scalar> > &domain,
    const ArrayView<const RCP<VectorBase<Scalar> > > &col_vecs = Teuchos::null
    );

  /** \brief Set uninitialized. */
  void uninitialize();

  //@}

  /** @name Overridden from LinearOpBAse */
  //@{
  /** \brief . */
  RCP<const VectorSpaceBase<Scalar> > range() const;
  /** \brief . */
  RCP<const VectorSpaceBase<Scalar> > domain() const;
  //@}

  /** @name Overridden from MultiVectorBase */
  //@{
  /** \brief . */
  RCP<VectorBase<Scalar> > nonconstColImpl(Ordinal j);
  /** \brief . */
  RCP<MultiVectorBase<Scalar> >
  nonconstContigSubViewImpl( const Range1D& col_rng );
  //@}

protected:

  /** @name Overridden protected functions from MultiVectorBase */
  //@{

  /** \brief . */
  void assignImpl(Scalar alpha);

  //@}

  /** @name Overridden protected functions from LinearOpBase */
  //@{

  /** \brief For complex <tt>Scalar</tt> types returns <tt>true</tt> for
   * <tt>NOTRANS</tt> and <tt>CONJTRANS</tt> and for real types returns true
   * for all values of <tt>M_trans</tt>.
   */
  bool opSupportedImpl(EOpTransp M_trans) const;

  /** \brief This function is implemented in terms of the multi-vector
   * <tt>applyOp()</tt> function.
   *
   * The implementation takes care of two types of operations.  One
   * (<tt>M_trans==TRANS</tt>) is the block dot product of two vectors to form
   * scalar (stored as the vector <tt>y</tt> which as one component).  The
   * other (<tt>M_trans==NOTRANS</tt>) is essentially an axpy operation where
   * <tt>x</tt> is a vector with one element.  Both of these operations are
   * performed using reduction/transformation operators.
   *
   * This implementation is near optimal but the default implementation of the
   * multi-vector version of <tt>apply()</tt> as implemented in the base class
   * <tt>LinearOpBase</tt> will not be a near optimal implementation in its
   * current form do to multiple, sequential reductions but it could be made
   * to be with a little work.
   */
  void applyImpl(
    const EOpTransp M_trans,
    const MultiVectorBase<Scalar> &X,
    const Ptr<MultiVectorBase<Scalar> > &Y,
    const Scalar alpha,
    const Scalar beta
    ) const;

  //@}

private:
  
  RCP<const VectorSpaceBase<Scalar> > range_;
  RCP<const VectorSpaceBase<Scalar> > domain_;
  Array<RCP<VectorBase<Scalar> > > col_vecs_;
  
};


} // end namespace Thyra


#endif // THYRA_DEFAULT_COLUMNWISE_MULTI_VECTOR_DECL_HPP