/usr/include/trilinos/Stokhos_StieltjesBasisImp.hpp is in libtrilinos-stokhos-dev 12.4.2-2.
This file is owned by root:root, with mode 0o644.
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// ***********************************************************************
//
// Stokhos Package
// Copyright (2009) Sandia Corporation
//
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// 2. Redistributions in binary form must reproduce the above copyright
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// contributors may be used to endorse or promote products derived from
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// @HEADER
#include "Teuchos_Assert.hpp"
#include "Teuchos_TimeMonitor.hpp"
template <typename ordinal_type, typename value_type, typename func_type>
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
StieltjesBasis(
ordinal_type p,
const Teuchos::RCP<const func_type>& func_,
const Teuchos::RCP<const Stokhos::Quadrature<ordinal_type, value_type> >& quad_,
bool use_pce_quad_points_,
bool normalize) :
RecurrenceBasis<ordinal_type, value_type>("Stieltjes PCE", p, normalize),
func(func_),
quad(quad_),
pce_weights(quad->getQuadWeights()),
basis_values(quad->getBasisAtQuadPoints()),
func_vals(),
phi_vals(),
use_pce_quad_points(use_pce_quad_points_)
{
// Setup rest of recurrence basis
this->setup();
}
template <typename ordinal_type, typename value_type, typename func_type>
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
~StieltjesBasis()
{
}
template <typename ordinal_type, typename value_type, typename func_type>
void
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
getQuadPoints(ordinal_type quad_order,
Teuchos::Array<value_type>& quad_points,
Teuchos::Array<value_type>& quad_weights,
Teuchos::Array< Teuchos::Array<value_type> >& quad_values) const
{
#ifdef STOKHOS_TEUCHOS_TIME_MONITOR
TEUCHOS_FUNC_TIME_MONITOR("Stokhos::StieltjesBasis -- compute Gauss points");
#endif
// Use underlying pce's quad points, weights, values
if (use_pce_quad_points) {
quad_points = func_vals;
quad_weights = pce_weights;
quad_values = phi_vals;
return;
}
// Call base class
ordinal_type num_points =
static_cast<ordinal_type>(std::ceil((quad_order+1)/2.0));
// We can't reliably generate quadrature points of order > 2*p
if (quad_order > 2*this->p)
quad_order = 2*this->p;
Stokhos::RecurrenceBasis<ordinal_type,value_type>::getQuadPoints(quad_order,
quad_points,
quad_weights,
quad_values);
// Fill in the rest of the points with zero weight
if (quad_weights.size() < num_points) {
ordinal_type old_size = quad_weights.size();
quad_weights.resize(num_points);
quad_points.resize(num_points);
quad_values.resize(num_points);
for (ordinal_type i=old_size; i<num_points; i++) {
quad_weights[i] = value_type(0);
quad_points[i] = quad_points[0];
quad_values[i].resize(this->p+1);
this->evaluateBases(quad_points[i], quad_values[i]);
}
}
}
template <typename ordinal_type, typename value_type, typename func_type>
bool
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
computeRecurrenceCoefficients(ordinal_type n,
Teuchos::Array<value_type>& alpha,
Teuchos::Array<value_type>& beta,
Teuchos::Array<value_type>& delta,
Teuchos::Array<value_type>& gamma) const
{
ordinal_type nqp = phi_vals.size();
Teuchos::Array<value_type> nrm(n);
Teuchos::Array< Teuchos::Array<value_type> > vals(nqp);
for (ordinal_type i=0; i<nqp; i++)
vals[i].resize(n);
stieltjes(0, n, pce_weights, func_vals, alpha, beta, nrm, vals);
for (ordinal_type i=0; i<n; i++) {
delta[i] = value_type(1.0);
gamma[i] = value_type(1.0);
}
// Save basis functions at quad point values
if (n == this->p+1)
phi_vals = vals;
return false;
}
template <typename ordinal_type, typename value_type, typename func_type>
void
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
setup()
{
// Evaluate func at quad points
const Teuchos::Array< Teuchos::Array<value_type> >& quad_points =
quad->getQuadPoints();
ordinal_type nqp = pce_weights.size();
func_vals.resize(nqp);
phi_vals.resize(nqp);
for (ordinal_type i=0; i<nqp; i++) {
func_vals[i] = (*func)(quad_points[i]);
phi_vals[i].resize(this->p+1);
}
RecurrenceBasis<ordinal_type,value_type>::setup();
}
template <typename ordinal_type, typename value_type, typename func_type>
void
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
stieltjes(ordinal_type nstart,
ordinal_type nfinish,
const Teuchos::Array<value_type>& weights,
const Teuchos::Array<value_type>& points,
Teuchos::Array<value_type>& a,
Teuchos::Array<value_type>& b,
Teuchos::Array<value_type>& nrm,
Teuchos::Array< Teuchos::Array<value_type> >& phi_vals) const
{
#ifdef STOKHOS_TEUCHOS_TIME_MONITOR
TEUCHOS_FUNC_TIME_MONITOR("Stokhos::StieltjesBasis -- Discretized Stieltjes Procedure");
#endif
value_type val1, val2;
ordinal_type start = nstart;
if (nstart == 0) {
integrateBasisSquared(0, a, b, weights, points, phi_vals, val1, val2);
nrm[0] = val1;
a[0] = val2/val1;
b[0] = value_type(1);
start = 1;
}
for (ordinal_type i=start; i<nfinish; i++) {
integrateBasisSquared(i, a, b, weights, points, phi_vals, val1, val2);
// std::cout << "i = " << i << " val1 = " << val1 << " val2 = " << val2
// << std::endl;
TEUCHOS_TEST_FOR_EXCEPTION(val1 < 0.0, std::logic_error,
"Stokhos::StieltjesBasis::stieltjes(): "
<< " Polynomial " << i << " out of " << nfinish
<< " has norm " << val1
<< "! Try increasing number of quadrature points");
nrm[i] = val1;
a[i] = val2/val1;
b[i] = nrm[i]/nrm[i-1];
}
}
template <typename ordinal_type, typename value_type, typename func_type>
void
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
integrateBasisSquared(ordinal_type k,
const Teuchos::Array<value_type>& a,
const Teuchos::Array<value_type>& b,
const Teuchos::Array<value_type>& weights,
const Teuchos::Array<value_type>& points,
Teuchos::Array< Teuchos::Array<value_type> >& phi_vals,
value_type& val1, value_type& val2) const
{
evaluateRecurrence(k, a, b, points, phi_vals);
ordinal_type nqp = weights.size();
val1 = value_type(0);
val2 = value_type(0);
for (ordinal_type i=0; i<nqp; i++) {
val1 += weights[i]*phi_vals[i][k]*phi_vals[i][k];
val2 += weights[i]*phi_vals[i][k]*phi_vals[i][k]*points[i];
}
}
template <typename ordinal_type, typename value_type, typename func_type>
void
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
evaluateRecurrence(ordinal_type k,
const Teuchos::Array<value_type>& a,
const Teuchos::Array<value_type>& b,
const Teuchos::Array<value_type>& points,
Teuchos::Array< Teuchos::Array<value_type> >& values) const
{
ordinal_type np = points.size();
if (k == 0)
for (ordinal_type i=0; i<np; i++)
values[i][k] = 1.0;
else if (k == 1)
for (ordinal_type i=0; i<np; i++)
values[i][k] = points[i] - a[k-1];
else
for (ordinal_type i=0; i<np; i++)
values[i][k] =
(points[i] - a[k-1])*values[i][k-1] - b[k-1]*values[i][k-2];
}
template <typename ordinal_type, typename value_type, typename func_type>
Teuchos::RCP<Stokhos::OneDOrthogPolyBasis<ordinal_type,value_type> >
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
cloneWithOrder(ordinal_type p) const
{
return Teuchos::rcp(new Stokhos::StieltjesBasis<ordinal_type,value_type,func_type>(p,*this));
}
template <typename ordinal_type, typename value_type, typename func_type>
Stokhos::StieltjesBasis<ordinal_type, value_type, func_type>::
StieltjesBasis(ordinal_type p, const StieltjesBasis& basis) :
RecurrenceBasis<ordinal_type, value_type>(p, basis),
func(basis.func),
quad(basis.quad),
pce_weights(quad->getQuadWeights()),
basis_values(quad->getBasisAtQuadPoints()),
func_vals(),
phi_vals(),
use_pce_quad_points(basis.use_pce_quad_points)
{
this->setup();
}
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