This file is indexed.

/usr/include/trilinos/LOCA_Solver_Wrapper.H is in libtrilinos-nox-dev 12.4.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
// $Id$
// $Source$

//@HEADER
// ************************************************************************
//
//            LOCA: Library of Continuation Algorithms Package
//                 Copyright (2005) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Roger Pawlowski (rppawlo@sandia.gov) or
// Eric Phipps (etphipp@sandia.gov), Sandia National Laboratories.
// ************************************************************************
//  CVS Information
//  $Source$
//  $Author$
//  $Date$
//  $Revision$
// ************************************************************************
//@HEADER

#ifndef LOCA_SOLVER_WRAPPER_H
#define LOCA_SOLVER_WRAPPER_H

#include "NOX_Solver_Generic.H"    // base class

namespace LOCA {

  //! %LOCA %Solver classes
  namespace Solver{

    /*!
     * \brief A %wrapper class for wrapping a %NOX solver.
     */
    /*!
     * The %LOCA::Solver::Wrapper class provides a wrapper for %NOX solvers
     * to change the group data returned by getSolutionGroup() and
     * getPreviousSolutionGroup() so that status tests can operate correctly.
     * %LOCA continuation and bifurcation algorithms are implemented by
     * extended groups which augment the nonlinear equations defining
     * equilibrium solutions with appropriate continuation/bifurcation
     * equations.  Therefore the groups returned by getSolutionGroup() and
     * getPreviousSolutionGroup() will be groups corresponding to the
     * continuation/bifurcation equations, not the underlying group.
     * Status tests that are designed to use concrete data from the original
     * underlying group (e.g., NOX::StatusTest::NormWRMS) will then fail
     * (usually via a segmentation fault or raised exception) when applied
     * to the extended continuation or bifurcation groups.
     *
     * This solver wrapper class fixes this problem by reimplementing the
     * solution group accessor methods to return the underlying groups of
     * the solution groups
     * (via LOCA::Extended::MultiAbstractGroup::getUnderlyingGroup()) if they
     * are extended groups (derived from LOCA::Extended::MultiAbstractGroup).
     * If the groups are not extended groups, the original solution groups are
     * returned.  All other NOX::Solver::Generic methods are passed to the
     * wrapped solver.
     *
     * The LOCA::StatusTest::Wrapper class uses this wrapper class to wrap
     * the solver supplied via the checkStatus method which is then forwarded
     * to the original status test.  When used properly, the group "seen" by
     * the status test is of the appropriate type for the status test.
     */
    class Wrapper : public NOX::Solver::Generic {

    public:

      //! Constructor with a non-const ref-count pointer to a %NOX solver
      /*!
       * The constructor calls resetWrapper() to grab the proper solution
       * groups.
       */
      Wrapper(const Teuchos::RCP<NOX::Solver::Generic>& solver);

      //! Constructor with a const ref-count pointer to a %NOX solver
      /*!
       * The constructor calls resetWrapper() to grab the proper solution
       * groups.
       */
      Wrapper(const Teuchos::RCP<const NOX::Solver::Generic>& solver);

      //! Destructor
      ~Wrapper();

      //! Implementation of reset method (forwarded to wrapped solver)
      void reset(const NOX::Abstract::Vector& initialGuess);

      //! Implementation of reset method (forwarded to wrapped solver)
      void reset(const NOX::Abstract::Vector& initialGuess,
         const Teuchos::RCP<NOX::StatusTest::Generic>& tests);

      //! Implementation of getStatus method (forwarded to wrapped solver)
      NOX::StatusTest::StatusType getStatus();

      //! Implementation of step method (forwarded to wrapped solver)
      NOX::StatusTest::StatusType step();

      //! Implementation of solve method (forwarded to wrapped solver)
      NOX::StatusTest::StatusType solve();

      /*!
       * \brief Returns underlying group if solution group is extended,
       * solution group otherwise.
       */
      const NOX::Abstract::Group& getSolutionGroup() const;

      /*!
       * \brief Returns underlying group if previous solution group is
       * extended, previous solution group otherwise.
       */
      const NOX::Abstract::Group& getPreviousSolutionGroup() const;

      /*!
       * \brief Implementation of getNumIterations method (forwarded to
       * wrapped solver)
       */
      int getNumIterations() const;

      /*!
       * \brief Implementation of getList method (forwarded to
       * wrapped solver)
       */
      const Teuchos::ParameterList& getList() const;

      /*!
       * \brief Returns underlying group if solution group is extended,
       * solution group otherwise.
       */
      Teuchos::RCP< const NOX::Abstract::Group > getSolutionGroupPtr() const;

      /*!
       * \brief Returns underlying group if previous solution group is
       * extended, previous solution group otherwise.
       */
      Teuchos::RCP< const NOX::Abstract::Group > getPreviousSolutionGroupPtr() const;

      /*!
       * \brief Implementation of getListPtr method (forwarded to
       * wrapped solver)
       */
      Teuchos::RCP< const Teuchos::ParameterList > getListPtr() const;

    protected:

      //! Grabs appropriate solution groups from solver
      void resetWrapper();

    protected:

      //! Pointer to the solver object
      Teuchos::RCP<NOX::Solver::Generic> solverPtr;

      //! Pointer to the const solver object
      Teuchos::RCP<const NOX::Solver::Generic> constSolverPtr;

      //! Pointer to solution group
      Teuchos::RCP<const NOX::Abstract::Group> solnGrpPtr;

      //! Pointer to previous solution group
      Teuchos::RCP<const NOX::Abstract::Group> oldSolnGrpPtr;

    };
  }
}
#endif