/usr/include/io_lib/traceType.h is in libstaden-read-dev 1.14.6-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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* Copyright (c) 2005, 2007 Genome Research Ltd.
* Author(s): James Bonfield
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
*
* 2. Redistributions in binary form must reproduce the above
* copyright notice, this list of conditions and the following
* disclaimer in the documentation and/or other materials provided
* with the distribution.
*
* 3. Neither the names Genome Research Ltd and Wellcome Trust Sanger
* Institute nor the names of its contributors may be used to endorse
* or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS
* IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
* TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
* PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH
* LTD OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
* THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
/*
* Author(s): James Bonfield
*
* Copyright (c) 1994-1996 MEDICAL RESEARCH COUNCIL
* All rights reserved
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1 Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
*
* 2 Redistributions in binary form must reproduce the above copyright
* notice, this list of conditions and the following disclaimer in
* the documentation and/or other materials provided with the
* distribution.
*
* 3 Neither the name of the MEDICAL RESEARCH COUNCIL, THE LABORATORY OF
* MOLECULAR BIOLOGY nor the names of its contributors may be used
* to endorse or promote products derived from this software without
* specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
*/
/*
* Copyright (c) Medical Research Council 1994. All rights reserved.
*
* Permission to use, copy, modify and distribute this software and its
* documentation for any purpose is hereby granted without fee, provided that
* this copyright and notice appears in all copies.
*
* This file was written by James Bonfield, Simon Dear, Rodger Staden,
* as part of the Staden Package at the MRC Laboratory of Molecular
* Biology, Hills Road, Cambridge, CB2 2QH, United Kingdom.
*
* MRC disclaims all warranties with regard to this software.
*/
#ifndef _traceType_h
#define _traceType_h
/*
* Title: traceType.h
*
* File: traceType.h
* Purpose: determining traceType of traces
* Last update: Tue Jan 15 1991
*
* Change log :-
*/
/* ---- Imports ---- */
#include <stdio.h> /* IMPORT: fopen, fclose, fseek, ftell, fgetc */
#include <ctype.h>
#include <string.h> /* IMPORT: isprint*/
#include "io_lib/Read.h" /* IMPORT: TT_xxx defines */
#include "io_lib/mFILE.h"
#ifdef __cplusplus
extern "C" {
#endif
/*
* Determine the trace type for file 'fn'.
*
* Returns:
* TT_SCF, TT_ABI, TT_ALF, or TT_PLN for success.
* TT_UNK for unknown type.
* TT_ERR for error.
*/
extern int determine_trace_type(char *fn);
/*
* Determine the trace type for FILE * 'fp'.
*
* Returns:
* TT_SCF, TT_ABI, TT_ALF, or TT_PLN for success.
* TT_UNK for unknown type.
* TT_ERR for error.
*/
extern int fdetermine_trace_type(mFILE *fp);
/*
* Returns a statically declared string containing a 3 character
* identifier for this trace type.
* "ERR" represents error, and "UNK" for unknown.
* Successful values are "SCF", "ABI", "ALF" and "PLN".
*/
extern char *trace_type_str(char *traceName);
/*
* Converts a trace type string to an integer.
*/
extern int trace_type_str2int(char *str);
/*
* Converts a trace type integer to a string.
*/
char *trace_type_int2str(int type);
#ifdef __cplusplus
}
#endif
#endif /*_traceType_h*/
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