/usr/include/rdkit/GraphMol/FMCS/MatchTable.h is in librdkit-dev 201503-3.
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// Copyright (C) 2014 Novartis Institutes for BioMedical Research
//
// @@ All Rights Reserved @@
// This file is part of the RDKit.
// The contents are covered by the terms of the BSD license
// which is included in the file license.txt, found at the root
// of the RDKit source tree.
//
#pragma once
#include <vector>
#include <stdexcept>
namespace RDKit {
namespace FMCS {
template<typename T>
class TArray2D { // for scalar value types ! including bool with special STL implementation (no reference to item - bitset used)
size_t XSize;
size_t YSize;
std::vector<T> Data;
public:
inline TArray2D(size_t cy=0, size_t cx=0) : XSize(cx), YSize(cy), Data(cx*cy) {}
inline size_t getXSize()const {
return XSize;
}
inline size_t getYSize()const {
return YSize;
}
inline bool empty ()const {
return Data.empty();
}
inline void clear () {
Data.clear();
XSize = 0;
YSize = 0;
}
inline void resize(size_t cy, size_t cx) {
Data.resize(cx*cy);
XSize = cx;
YSize = cy;
}
inline void set(size_t row, size_t col, T val) {
Data[row*XSize + col] = val;
}
inline T at(size_t row, size_t col) {
return Data[row*XSize + col];
}
inline T at(size_t row, size_t col)const {
return Data[row*XSize + col];
}
};
typedef TArray2D<bool> MatchTable; // row is index in QueryMolecule
}
}
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