/usr/include/psurface/Hdf5IO.h is in libpsurface-dev 2.0.0-1.1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 | #ifndef HDF5IO_H
#define HDF5IO_H
#include <stdio.h>
#include <stdlib.h>
namespace psurface{
template<class ctype,int dim>
class Hdf5IO{
private:
/// Psurface object hdf5IO deals.
PSurface<2,ctype>* par;
/// Global coordinate of nodes
std::vector<StaticVector<ctype,3> > nodePositions;
/// Parameter Edge endpoints in global index
std::vector<StaticVector<int,2> > parameterEdgeArray;
/// Number of triangle vertices
int numVertices;
/// Number of base grid triangles
int numTriangles;
/// Number of nodes
int numNodes;
/// Number of ParamEdge
int numParamEdges;
/// Number of total Edge Points
int numEdgePoints;
/// Total number of cells
int ncells;
/// Total number of points
int nvertices;
/// Writes the parametrization in hdf5 format with all data we need to read it in paraview.
void writeHdf5Data(const std::string& filename);
/// Writes the parametrization in hdf5 format
void writeBaseHdf5Data(const std::string& filename);
public:
/// Read a psurface object from an hdf5 file
static PSurface<2, ctype>* read(const std::string& filename);
/** \brief Hdf5 I/O for a 2d psurface in a 3d world
*
* This is the case we actually support
*/
Hdf5IO(PSurface<2,ctype>* psurface);
/** \brief Hdf5 I/O for a 1d psurface in a 2d world
*
* We don't support this case yet.
*/
Hdf5IO(PSurface<1,ctype>* psurface) {}
/** \brief Writes the parametrization in hdf5 format and create related xdmf file
*
* \param base if true, we create hdf5 file that only contain necessary data
* of the psurface. If false, we create hdf5 file that contains all data
* needed to display the psurface object in paraview.
*/
void createHdfAndXdmf(const std::string& xdf_filename, const std::string& hdf_filename, bool base);
/// Writes xdmf file so we can read hdf5 throught paraview
void writeXdmf(const std::string& xdf_filename, const std::string& hdf_filename);
/// Reads the parametrization from Hdf5 object
void initCompletePSurface(Surface* surf, const std::string& filename);
};
}// namespace psurface
#endif
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