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/**
* @file PythonWrappingFunctions.hxx
* @brief This file provides functions to ease Python wrapping
*
* Copyright 2005-2015 Airbus-EDF-IMACS-Phimeca
*
* This library is free software: you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This library is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* along with this library. If not, see <http://www.gnu.org/licenses/>.
*
* @author schueller
* @date 2009-09-14 14:39:35 +0200 (Mon, 14 Sep 2009)
*/
#ifndef OPENTURNS_PYTHONWRAPPINGFUNCTIONS_HXX
#define OPENTURNS_PYTHONWRAPPINGFUNCTIONS_HXX
#include "Python.h"
#include "OT.hxx"
BEGIN_NAMESPACE_OPENTURNS
/** Scoped PyObject pointer: automatically triggers garbage collection */
class ScopedPyObjectPointer
{
public:
explicit ScopedPyObjectPointer( PyObject * pyObj = 0 )
: pyObj_(pyObj)
{
}
~ScopedPyObjectPointer()
{
Py_XDECREF( pyObj_ );
}
ScopedPyObjectPointer & operator=(PyObject * pyObj)
{
Py_XDECREF( pyObj_ );
pyObj_ = pyObj;
return *this;
}
PyObject & operator*() const
{
return *pyObj_;
}
PyObject * get() const
{
return pyObj_;
}
bool isNull()
{
return !pyObj_;
}
private:
PyObject* pyObj_;
};
/** These templates are just declared, not defined. Only specializations are. */
template <class CPP_Type> struct traitsPythonType;
template <class PYTHON_Type> static inline int isAPython(PyObject * pyObj);
template <class PYTHON_Type> static inline const char * namePython();
template <class PYTHON_Type, class CPP_Type> static inline CPP_Type convert(PyObject * pyObj);
template <class CPP_Type, class PYTHON_Type> static inline PyObject * convert(CPP_Type);
template <class PYTHON_Type, class CPP_Type> static inline bool canConvert(PyObject * pyObj);
template <class PYTHON_Type> static inline void check(PyObject * pyObj);
template <class PYTHON_Type, class CPP_Type> static inline CPP_Type checkAndConvert(PyObject * pyObj);
template <class T> static inline T * buildObjectFromPySequence(PyObject * pyObj);
/** Specializations */
/* PyObject */
struct _PyObject_ {};
template <>
inline
int
isAPython<_PyObject_>(PyObject * pyObj)
{
return 1;
}
template <>
inline
const char *
namePython<_PyObject_>()
{
return "object";
}
/* PyBool */
struct _PyBool_ {};
template <>
inline
int
isAPython<_PyBool_>(PyObject * pyObj)
{
return PyBool_Check( pyObj );
}
template <>
inline
const char *
namePython<_PyBool_>()
{
return "bool";
}
template <>
struct traitsPythonType<Bool>
{
typedef _PyBool_ Type;
};
template <>
inline
Bool
convert< _PyBool_, Bool >(PyObject * pyObj)
{
return pyObj == Py_True;
}
/* PyInt */
struct _PyInt_ {};
template <>
inline
int
isAPython< _PyInt_ >(PyObject * pyObj)
{
// PyInt type is deprecated
#if PY_MAJOR_VERSION >= 3
return PyLong_Check( pyObj );
#else
return PyInt_Check( pyObj ) || PyLong_Check( pyObj );
#endif
}
template <>
inline
const char *
namePython< _PyInt_ >()
{
return "integer";
}
template <>
struct traitsPythonType< UnsignedInteger >
{
typedef _PyInt_ Type;
};
template <>
inline
UnsignedInteger
convert< _PyInt_, UnsignedInteger >(PyObject * pyObj)
{
return PyLong_AsUnsignedLong( pyObj );
}
template <>
inline
PyObject *
convert< UnsignedInteger, _PyInt_ >(UnsignedInteger n)
{
return PyLong_FromUnsignedLong( n );
}
/* PyFloat */
struct _PyFloat_ {};
template <>
inline
int
isAPython< _PyFloat_ >(PyObject * pyObj)
{
// check also against sequence protocol as numpy array complies to several protocols
return PyNumber_Check( pyObj ) && !PyComplex_Check(pyObj) && !PySequence_Check( pyObj );
}
template <>
inline
const char *
namePython<_PyFloat_>()
{
return "double";
}
template <>
struct traitsPythonType< NumericalScalar >
{
typedef _PyFloat_ Type;
};
template <>
inline
NumericalScalar
convert< _PyFloat_, NumericalScalar >(PyObject * pyObj)
{
return PyFloat_AsDouble( pyObj );
}
template <>
inline
PyObject *
convert< NumericalScalar, _PyFloat_ >(NumericalScalar x)
{
return PyFloat_FromDouble( x );
}
/* PyComplex */
struct _PyComplex_ {};
template <>
inline
int
isAPython<_PyComplex_>(PyObject * pyObj)
{
return PyNumber_Check( pyObj );
}
template <>
inline
const char *
namePython<_PyComplex_>()
{
return "complex";
}
template <>
struct traitsPythonType< NumericalComplex >
{
typedef _PyComplex_ Type;
};
template <>
inline
NumericalComplex
convert< _PyComplex_, NumericalComplex >(PyObject * pyObj)
{
return NumericalComplex( PyComplex_RealAsDouble( pyObj ), PyComplex_ImagAsDouble( pyObj ) );
}
template <>
inline
PyObject *
convert< NumericalComplex, _PyComplex_ >(NumericalComplex x)
{
return PyComplex_FromDoubles( x.real(), x.imag() );
}
/* PyBytes */
struct _PyBytes_ {};
template <>
inline
int
isAPython< _PyBytes_ >(PyObject * pyObj)
{
#if PY_MAJOR_VERSION >= 3
return PyBytes_Check( pyObj );
#else
return PyString_Check( pyObj );
#endif
}
template <>
inline
const char *
namePython< _PyBytes_ >()
{
return "bytes";
}
template <>
inline
String
convert< _PyBytes_, String >(PyObject * pyObj)
{
#if PY_MAJOR_VERSION >= 3
return PyBytes_AsString( pyObj );
#else
return PyString_AsString( pyObj );
#endif
}
template <>
inline
PyObject *
convert< String, _PyBytes_ >( String s )
{
#if PY_MAJOR_VERSION >= 3
return PyBytes_FromString( s.data() );
#else
return PyString_FromString( s.data() );
#endif
}
/* PyUnicode */
struct _PyUnicode_ {};
template <>
inline
int
isAPython< _PyUnicode_ >(PyObject * pyObj)
{
return PyUnicode_Check(pyObj);
}
template <>
inline
const char *
namePython< _PyUnicode_ >()
{
return "unicode";
}
template <>
inline
String
convert< _PyUnicode_, String >(PyObject * pyObj)
{
ScopedPyObjectPointer encodedBytes(PyUnicode_AsUTF8String(pyObj));
assert(encodedBytes.get());
return convert<_PyBytes_, String>(encodedBytes.get());
}
template <>
inline
PyObject *
convert< String, _PyUnicode_ >( String s )
{
return PyUnicode_FromString(s.data());
}
/* PyString */
struct _PyString_ {};
template <>
inline
int
isAPython< _PyString_ >(PyObject * pyObj)
{
#if PY_MAJOR_VERSION >= 3
return PyUnicode_Check(pyObj);
#else
return PyString_Check(pyObj) || PyUnicode_Check(pyObj);
#endif
}
template <>
inline
const char *
namePython<_PyString_>()
{
return "string";
}
template <>
struct traitsPythonType< String >
{
typedef _PyString_ Type;
};
template <>
inline
String
convert< _PyString_, String >(PyObject * pyObj)
{
String result;
#if PY_MAJOR_VERSION >= 3
result = convert< _PyUnicode_, String >(pyObj);
#else
if(isAPython<_PyBytes_>(pyObj))
{
result = convert<_PyBytes_, String>(pyObj);
}
else if (isAPython<_PyUnicode_>(pyObj))
{
result = convert<_PyUnicode_, String>(pyObj);
}
#endif
return result;
}
template <>
inline
PyObject *
convert< String, _PyString_ >( String s )
{
#if PY_MAJOR_VERSION >= 3
return convert<String, _PyUnicode_>(s);
#else
return convert<String, _PyBytes_>(s);
#endif
}
/* PySequence */
struct _PySequence_ {};
template <>
inline
int
isAPython< _PySequence_ >(PyObject * pyObj)
{
return PySequence_Check( pyObj );
}
template <>
inline
const char *
namePython<_PySequence_>()
{
return "sequence object";
}
template <class PYTHON_Type>
static inline
int
isAPythonSequenceOf(PyObject * pyObj)
{
int ok = isAPython<_PySequence_>( pyObj ) && ( ! isAPython< _PyString_ >( pyObj ) );
if ( ok )
{
const UnsignedInteger size = PySequence_Size( pyObj );
for( UnsignedInteger i = 0; ok && (i < size); ++i )
{
ScopedPyObjectPointer elt(PySequence_ITEM( pyObj, i ));
int elt_ok = isAPython<PYTHON_Type>( elt.get() );
ok *= elt_ok;
}
}
return ok;
}
template <class PYTHON_Type>
static inline
void
check(PyObject * pyObj)
{
if (! isAPython<PYTHON_Type>( pyObj ))
{
throw InvalidArgumentException(HERE) << "Object passed as argument is not a " << namePython<PYTHON_Type>();
}
}
template <class PYTHON_Type, class CPP_Type>
static inline
CPP_Type
checkAndConvert(PyObject * pyObj)
{
check<PYTHON_Type>( pyObj );
return convert< PYTHON_Type, CPP_Type >( pyObj );
}
template <class T>
static inline
bool
canConvertCollectionObjectFromPySequence(PyObject * pyObj)
{
try
{
check<_PySequence_>( pyObj );
}
catch( InvalidArgumentException & ex )
{
return false;
}
ScopedPyObjectPointer newPyObj(PySequence_Fast( pyObj, "" ));
const UnsignedInteger size = PySequence_Fast_GET_SIZE( newPyObj.get() );
for(UnsignedInteger i = 0; i < size; ++i)
{
PyObject * elt = PySequence_Fast_GET_ITEM( newPyObj.get(), i );
if (!canConvert< typename traitsPythonType< T >::Type, T >( elt ))
{
return false;
}
}
return true;
}
template <class T>
static inline
Collection<T> *
buildCollectionFromPySequence(PyObject * pyObj, int sz = 0)
{
check<_PySequence_>( pyObj );
ScopedPyObjectPointer newPyObj(PySequence_Fast( pyObj, "" ));
if (!newPyObj.get()) throw InvalidArgumentException(HERE) << "Not a sequence object";
const UnsignedInteger size = PySequence_Fast_GET_SIZE( newPyObj.get() );
if ((sz != 0) && (sz != (int)size))
{
throw InvalidArgumentException(HERE) << "Sequence object has incorrect size " << size << ". Must be " << sz << ".";
}
Collection<T> * p_coll = new Collection< T >( size );
for(UnsignedInteger i = 0; i < size; ++i)
{
PyObject * elt = PySequence_Fast_GET_ITEM( newPyObj.get(), i );
try
{
check<typename traitsPythonType< T >::Type>( elt );
}
catch( InvalidArgumentException & ex )
{
delete p_coll;
throw;
}
(*p_coll)[i] = convert< typename traitsPythonType< T >::Type, T >( elt );
}
return p_coll;
}
template <>
struct traitsPythonType< NumericalPoint >
{
typedef _PySequence_ Type;
};
template <>
inline
NumericalPoint
convert< _PySequence_, NumericalPoint >(PyObject * pyObj)
{
Pointer<Collection<NumericalScalar> > ptr = buildCollectionFromPySequence<NumericalScalar>( pyObj );
return NumericalPoint( *ptr );
}
template <>
inline
PyObject *
convert< NumericalPoint, _PySequence_ >(NumericalPoint inP)
{
UnsignedInteger dimension = inP.getDimension();
PyObject * point = PyTuple_New( dimension );
for ( UnsignedInteger i = 0; i < dimension; ++ i )
{
PyTuple_SetItem( point, i, convert< NumericalScalar, _PyFloat_ >( inP[i] ) );
}
return point;
}
template <>
struct traitsPythonType< Collection < NumericalComplex> >
{
typedef _PySequence_ Type;
};
template <>
inline
Collection<NumericalComplex>
convert<_PySequence_, Collection<NumericalComplex> >(PyObject * pyObj)
{
Pointer<Collection<NumericalComplex> > ptr = buildCollectionFromPySequence<NumericalComplex>( pyObj );
return Collection<NumericalComplex>( *ptr );
}
template <>
struct traitsPythonType< NumericalSample >
{
typedef _PySequence_ Type;
};
template <>
inline
NumericalSample
convert< _PySequence_, NumericalSample >(PyObject * pyObj)
{
Pointer<Collection<NumericalPoint> > ptr = buildCollectionFromPySequence<NumericalPoint>( pyObj );
return NumericalSample( *ptr );
}
template <>
struct traitsPythonType< Collection< UnsignedInteger > >
{
typedef _PySequence_ Type;
};
template <>
inline
Collection< UnsignedInteger >
convert< _PySequence_, Collection<UnsignedInteger> >(PyObject * pyObj)
{
Pointer<Collection<UnsignedInteger> > ptr = buildCollectionFromPySequence<UnsignedInteger>( pyObj );
return Collection<UnsignedInteger>( ptr->begin(), ptr->end() );
}
template <>
struct traitsPythonType< Indices >
{
typedef _PySequence_ Type;
};
template <>
inline
Indices
convert< _PySequence_, Indices >(PyObject * pyObj)
{
Pointer<Collection<UnsignedInteger> > ptr = buildCollectionFromPySequence<UnsignedInteger>( pyObj );
return Indices( ptr->begin(), ptr->end() );
}
template <>
struct traitsPythonType< Description >
{
typedef _PySequence_ Type;
};
template <>
inline
Description
convert<_PySequence_, Description>(PyObject * pyObj)
{
Pointer<Collection<String> > ptr = buildCollectionFromPySequence<String>( pyObj );
return Description( *ptr );
}
template <>
struct traitsPythonType< Collection< NumericalScalar > >
{
typedef _PySequence_ Type;
};
template <>
inline
Collection<NumericalScalar>
convert< _PySequence_, Collection<NumericalScalar> >(PyObject * pyObj)
{
Pointer<Collection<NumericalScalar> > ptr = buildCollectionFromPySequence<NumericalScalar>( pyObj );
return Collection<NumericalScalar>( *ptr );
}
template <>
struct traitsPythonType< MatrixImplementation >
{
typedef _PySequence_ Type;
};
template <>
inline
MatrixImplementation*
convert< _PySequence_, MatrixImplementation* >(PyObject * pyObj)
{
MatrixImplementation *p_implementation = 0;
// use the same conversion function for numpy array/matrix, knowing numpy matrix is not a sequence
if ( PyObject_HasAttrString(pyObj, const_cast<char *>("shape")) )
{
ScopedPyObjectPointer shapeObj(PyObject_GetAttrString( pyObj, "shape" ));
if ( shapeObj.get() )
{
Indices shape( checkAndConvert< _PySequence_, Indices >( shapeObj.get() ) );
if ( shape.getSize() == 2 )
{
UnsignedInteger nbRows = shape[0];
UnsignedInteger nbColumns = shape[1];
ScopedPyObjectPointer askObj(PyTuple_New(2));
ScopedPyObjectPointer methodObj(convert< String, _PyString_ >("__getitem__"));
p_implementation = new MatrixImplementation( nbRows, nbColumns );
for ( UnsignedInteger i = 0; i < nbRows; ++ i )
{
PyTuple_SetItem( askObj.get(), 0, convert< UnsignedInteger, _PyInt_ >(i) );
for ( UnsignedInteger j = 0; j < nbColumns; ++ j )
{
PyTuple_SetItem( askObj.get(), 1, convert< UnsignedInteger, _PyInt_ >(j) );
ScopedPyObjectPointer elt(PyObject_CallMethodObjArgs( pyObj, methodObj.get(), askObj.get(), NULL ));
if ( elt.get() )
{
try
{
p_implementation->operator()( i, j ) = checkAndConvert<_PyFloat_, NumericalScalar>( elt.get() );
}
catch( InvalidArgumentException & ex )
{
delete p_implementation;
throw;
}
}
}
}
}
else
throw InvalidArgumentException(HERE) << "Invalid array dimension: " << shape.getSize();
}
}
else if ( PyObject_HasAttrString(pyObj, const_cast<char *>("getNbColumns")) )
{
// case of conversion from XMatrix to YMatrix
// X could be Square,Triangular,Identity...
// YMatrix might be Matrix of one of its inheritance types
ScopedPyObjectPointer colunmsObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getNbColumns" ),
const_cast<char *>( "()" ) ));
ScopedPyObjectPointer rowsObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getNbRows" ),
const_cast<char *>( "()" ) ));
ScopedPyObjectPointer implObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getImplementation" ),
const_cast<char *>( "()" ) ));
Pointer< Collection< NumericalScalar > > ptr = buildCollectionFromPySequence< NumericalScalar >( implObj.get() );
UnsignedInteger nbColumns( checkAndConvert< _PyInt_, UnsignedInteger >( colunmsObj.get() ) );
UnsignedInteger nbRows( checkAndConvert< _PyInt_, UnsignedInteger >( rowsObj.get() ) );
p_implementation = new MatrixImplementation( nbRows, nbColumns, *ptr );
}
else
{
// try to convert from a sequence of sequences
Pointer< Collection< NumericalPoint > > ptr = buildCollectionFromPySequence< NumericalPoint >( pyObj );
NumericalSample sample( *ptr );
UnsignedInteger nbRows = sample.getSize();
UnsignedInteger nbColumns = sample.getDimension();
p_implementation = new MatrixImplementation( nbRows, nbColumns );
for ( UnsignedInteger i = 0; i < nbRows; ++ i )
for ( UnsignedInteger j = 0; j < nbColumns; ++ j )
p_implementation->operator()( i, j ) = sample[i][j];
}
return p_implementation;
}
template <>
inline
Matrix
convert< _PySequence_, Matrix >(PyObject * pyObj)
{
MatrixImplementation *p_implementation = convert< _PySequence_, MatrixImplementation* >(pyObj);
return Matrix( p_implementation );
}
template <>
inline
SquareMatrix
convert< _PySequence_, SquareMatrix >(PyObject * pyObj)
{
MatrixImplementation *p_implementation = convert< _PySequence_, MatrixImplementation* >(pyObj);
if ( p_implementation->getNbRows() != p_implementation->getNbColumns() )
throw InvalidArgumentException(HERE) << "The matrix is not square";
return SquareMatrix( p_implementation );
}
template <>
inline
TriangularMatrix
convert< _PySequence_, TriangularMatrix >(PyObject * pyObj)
{
MatrixImplementation *p_implementation = convert< _PySequence_, MatrixImplementation* >(pyObj);
if (!(p_implementation->isTriangular(true) || p_implementation->isTriangular(false)))
throw InvalidArgumentException(HERE) << "The matrix is not triangular";
return TriangularMatrix( p_implementation, p_implementation->isTriangular(true) );
}
template <>
inline
SymmetricMatrix
convert< _PySequence_, SymmetricMatrix >(PyObject * pyObj)
{
MatrixImplementation *p_implementation = convert< _PySequence_, MatrixImplementation* >(pyObj);
if (!p_implementation->isSymmetric())
throw InvalidArgumentException(HERE) << "The matrix is not symmetric";
return SymmetricMatrix( p_implementation );
}
template <>
inline
CovarianceMatrix
convert< _PySequence_, CovarianceMatrix >(PyObject * pyObj)
{
MatrixImplementation *p_implementation = convert< _PySequence_, MatrixImplementation* >(pyObj);
if (!p_implementation->isSymmetric())
throw InvalidArgumentException(HERE) << "The matrix is not symmetric";
// SPD check is too expensive
return CovarianceMatrix( p_implementation );
}
template <>
inline
CorrelationMatrix
convert< _PySequence_, CorrelationMatrix >(PyObject * pyObj)
{
MatrixImplementation *p_implementation = convert< _PySequence_, MatrixImplementation* >(pyObj);
if (!p_implementation->isSymmetric())
throw InvalidArgumentException(HERE) << "The matrix is not symmetric";
// SPD check is too expensive
if (!p_implementation->hasUnitRange())
throw InvalidArgumentException(HERE) << "The matrix range is not (-1;1)";
return CorrelationMatrix( p_implementation );
}
template <>
struct traitsPythonType< TensorImplementation >
{
typedef _PySequence_ Type;
};
template <>
inline
TensorImplementation*
convert< _PySequence_, TensorImplementation* >(PyObject * pyObj)
{
Pointer< Collection< NumericalSample > > ptr = buildCollectionFromPySequence< NumericalSample >( pyObj );
UnsignedInteger nbRows = ptr->getSize();
UnsignedInteger nbColumns = ptr->getSize() > 0 ? (*ptr)[0].getSize() : 0;
UnsignedInteger nbSheets = ptr->getSize() > 0 ? (*ptr)[0].getDimension() : 0;
TensorImplementation *p_implementation = new TensorImplementation( nbRows, nbColumns, nbSheets );
for ( UnsignedInteger i = 0; i < nbRows; ++ i )
for ( UnsignedInteger j = 0; j < nbColumns; ++ j )
for ( UnsignedInteger k = 0; k < nbSheets; ++ k )
p_implementation->operator()( i, j, k ) = (*ptr)[i][j][k];
return p_implementation;
}
template <>
inline
Tensor
convert< _PySequence_, Tensor >(PyObject * pyObj)
{
TensorImplementation *p_implementation = convert<_PySequence_, TensorImplementation*>(pyObj);
return Tensor( p_implementation );
}
template <>
inline
SymmetricTensor
convert< _PySequence_, SymmetricTensor >(PyObject * pyObj)
{
TensorImplementation *p_implementation = convert< _PySequence_, TensorImplementation* >(pyObj);
if (!p_implementation->isSymmetric())
throw InvalidArgumentException(HERE) << "The tensor is not symmetric";
return SymmetricTensor( p_implementation );
}
template <>
struct traitsPythonType< ComplexMatrixImplementation* >
{
typedef _PySequence_ Type;
};
template <>
inline
ComplexMatrixImplementation*
convert< _PySequence_, ComplexMatrixImplementation* >(PyObject * pyObj)
{
// use the same conversion function for numpy array/matrix, knowing numpy matrix is not a sequence
if ( PyObject_HasAttrString(pyObj, const_cast<char *>("shape")) )
{
ScopedPyObjectPointer shapeObj(PyObject_GetAttrString( pyObj, "shape" ));
if (shapeObj.get())
{
Indices shape( checkAndConvert< _PySequence_, Indices >( shapeObj.get() ) );
if ( shape.getSize() == 2 )
{
UnsignedInteger nbRows = shape[0];
UnsignedInteger nbColumns = shape[1];
ScopedPyObjectPointer askObj(PyTuple_New(2));
ScopedPyObjectPointer methodObj(convert< String, _PyString_ >("__getitem__"));
ComplexMatrixImplementation *p_implementation = new ComplexMatrixImplementation( nbRows, nbColumns );
for ( UnsignedInteger i = 0; i < nbRows; ++ i )
{
PyTuple_SetItem( askObj.get(), 0, convert< UnsignedInteger, _PyInt_ >(i) );
for ( UnsignedInteger j = 0; j < nbColumns; ++ j )
{
PyTuple_SetItem( askObj.get(), 1, convert< UnsignedInteger, _PyInt_ >(j) );
ScopedPyObjectPointer elt(PyObject_CallMethodObjArgs( pyObj, methodObj.get(), askObj.get(), NULL ));
if ( elt.get() )
{
try
{
p_implementation->operator()( i, j ) = checkAndConvert<_PyComplex_, NumericalComplex>( elt.get() );
}
catch( InvalidArgumentException & ex )
{
delete p_implementation;
throw;
}
}
}
}
return p_implementation;
}
else
throw InvalidArgumentException(HERE) << "Invalid array dimension: " << shape.getSize();
}
}
// case of conversion from XMatrix to YMatrix
// X could be Square,Triangular,Identity...
// YMatrix might be Matrix of one of its inheritance types
if ( PyObject_HasAttrString(pyObj, const_cast<char *>("getNbColumns")) )
{
ScopedPyObjectPointer colunmsObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getNbColumns" ),
const_cast<char *>( "()" ) ));
ScopedPyObjectPointer rowsObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getNbRows" ),
const_cast<char *>( "()" ) ));
ScopedPyObjectPointer implObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getImplementation" ),
const_cast<char *>( "()" ) ));
Pointer< Collection< NumericalComplex > > ptr = buildCollectionFromPySequence< NumericalComplex >( implObj.get() );
UnsignedInteger nbColumns( checkAndConvert< _PyInt_, UnsignedInteger >( colunmsObj.get() ) );
UnsignedInteger nbRows( checkAndConvert< _PyInt_, UnsignedInteger >( rowsObj.get() ) );
ComplexMatrixImplementation *p_implementation = new ComplexMatrixImplementation( nbRows, nbColumns, *ptr );
return p_implementation;
}
// else try to convert from a sequence of sequences
Pointer< Collection< Collection< NumericalComplex > > > ptr = buildCollectionFromPySequence< Collection< NumericalComplex > >( pyObj );
UnsignedInteger nbRows = ptr->getSize();
UnsignedInteger nbColumns = ptr->getSize() > 0 ? (*ptr)[0].getSize() : 0;
ComplexMatrixImplementation *p_implementation = new ComplexMatrixImplementation( nbRows, nbColumns );
for ( UnsignedInteger i = 0; i < nbRows; ++ i )
for ( UnsignedInteger j = 0; j < nbColumns; ++ j )
p_implementation->operator()( i, j ) = (*ptr)[i][j];
return p_implementation;
}
template <>
inline
ComplexMatrix
convert< _PySequence_, ComplexMatrix >(PyObject * pyObj)
{
ComplexMatrixImplementation *p_implementation = convert< _PySequence_, ComplexMatrixImplementation* >(pyObj);
return ComplexMatrix( p_implementation );
}
template <>
inline
SquareComplexMatrix
convert< _PySequence_, SquareComplexMatrix >(PyObject * pyObj)
{
ComplexMatrixImplementation *p_implementation = convert< _PySequence_, ComplexMatrixImplementation* >(pyObj);
if ( p_implementation->getNbRows() != p_implementation->getNbColumns() )
throw InvalidArgumentException(HERE) << "The matrix is not square";
return SquareComplexMatrix( p_implementation );
}
template <>
inline
TriangularComplexMatrix
convert< _PySequence_, TriangularComplexMatrix >(PyObject * pyObj)
{
ComplexMatrixImplementation *p_implementation = convert< _PySequence_, ComplexMatrixImplementation* >(pyObj);
Bool lower = p_implementation->isTriangular(true);
if ( !lower && !p_implementation->isTriangular(false) )
throw InvalidArgumentException(HERE) << "The matrix is not triangular";
return TriangularComplexMatrix( p_implementation, lower );
}
template <>
struct traitsPythonType< HermitianMatrix >
{
typedef _PySequence_ Type;
};
template <>
inline
HermitianMatrix
convert< _PySequence_, HermitianMatrix >(PyObject * pyObj)
{
ComplexMatrixImplementation *p_implementation = convert< _PySequence_, ComplexMatrixImplementation* >(pyObj);
if ( !p_implementation->isHermitian() )
throw InvalidArgumentException(HERE) << "The matrix is not hermitian";
return HermitianMatrix( p_implementation );
}
template <>
struct traitsPythonType< ComplexTensorImplementation >
{
typedef _PySequence_ Type;
};
template <>
inline
ComplexTensorImplementation*
convert< _PySequence_, ComplexTensorImplementation* >(PyObject * pyObj)
{
ComplexTensorImplementation *p_implementation = 0;
// use the same conversion function for numpy array/matrix, knowing numpy matrix is not a sequence
if ( PyObject_HasAttrString(pyObj, const_cast<char *>("shape")) )
{
ScopedPyObjectPointer shapeObj(PyObject_GetAttrString( pyObj, "shape" ));
if (shapeObj.get())
{
Indices shape( checkAndConvert< _PySequence_, Indices >( shapeObj.get() ) );
if ( shape.getSize() == 3 )
{
UnsignedInteger nbRows = shape[0];
UnsignedInteger nbColumns = shape[1];
UnsignedInteger nbSheets = shape[2];
ScopedPyObjectPointer askObj(PyTuple_New(3));
ScopedPyObjectPointer methodObj(convert< String, _PyString_ >("__getitem__"));
p_implementation = new ComplexTensorImplementation( nbRows, nbColumns, nbSheets );
for ( UnsignedInteger i = 0; i < nbRows; ++ i )
{
PyTuple_SetItem( askObj.get(), 0, convert< UnsignedInteger, _PyInt_ >(i) );
for ( UnsignedInteger j = 0; j < nbColumns; ++ j )
{
PyTuple_SetItem( askObj.get(), 1, convert< UnsignedInteger, _PyInt_ >(j) );
for ( UnsignedInteger k = 0; k < nbSheets; ++ k )
{
PyTuple_SetItem( askObj.get(), 2, convert< UnsignedInteger, _PyInt_ >(k) );
ScopedPyObjectPointer elt(PyObject_CallMethodObjArgs( pyObj, methodObj.get(), askObj.get(), NULL ));
if ( elt.get() )
{
try
{
p_implementation->operator()( i, j, k ) = checkAndConvert<_PyComplex_, NumericalComplex>( elt.get() );
}
catch( InvalidArgumentException & ex )
{
delete p_implementation;
throw;
}
}
}
}
}
}
else
throw InvalidArgumentException(HERE) << "Invalid array dimension: " << shape.getSize();
}
}
else if ( PyObject_HasAttrString(pyObj, const_cast<char *>("getNbSheets")) )
{
// case of conversion from XTensor to YTensor
ScopedPyObjectPointer colunmsObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getNbColumns" ),
const_cast<char *>( "()" ) ));
ScopedPyObjectPointer rowsObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getNbRows" ),
const_cast<char *>( "()" ) ));
ScopedPyObjectPointer sheetsObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getNbSheets" ),
const_cast<char *>( "()" ) ));
ScopedPyObjectPointer implObj(PyObject_CallMethod ( pyObj,
const_cast<char *>( "getImplementation" ),
const_cast<char *>( "()" ) ));
Pointer< Collection< NumericalComplex > > ptr = buildCollectionFromPySequence< NumericalComplex >( implObj.get() );
UnsignedInteger nbColumns( checkAndConvert< _PyInt_, UnsignedInteger >( colunmsObj.get() ) );
UnsignedInteger nbRows( checkAndConvert< _PyInt_, UnsignedInteger >( rowsObj.get() ) );
UnsignedInteger nbSheets( checkAndConvert< _PyInt_, UnsignedInteger >( sheetsObj.get() ) );
p_implementation = new ComplexTensorImplementation( nbRows, nbColumns, nbSheets, *ptr );
}
return p_implementation;
}
template <>
inline
ComplexTensor
convert< _PySequence_, ComplexTensor >(PyObject * pyObj)
{
ComplexTensorImplementation *p_implementation = convert<_PySequence_, ComplexTensorImplementation*>(pyObj);
return ComplexTensor( p_implementation );
}
template <>
struct traitsPythonType< WrapperDataFile >
{
typedef _PySequence_ Type;
};
template <>
inline
WrapperDataFile
convert< _PySequence_, WrapperDataFile >(PyObject * pyObj)
{
return WrapperDataFile();
}
template <>
struct traitsPythonType< WrapperDataVariable >
{
typedef _PySequence_ Type;
};
template <>
inline
WrapperDataVariable
convert< _PySequence_, WrapperDataVariable >(PyObject * pyObj)
{
return WrapperDataVariable();
}
template <>
struct traitsPythonType< WhittleFactoryState >
{
typedef _PySequence_ Type;
};
template <>
inline
WhittleFactoryState
convert< _PySequence_, WhittleFactoryState >(PyObject * pyObj)
{
return WhittleFactoryState();
}
template <>
struct traitsPythonType< CovarianceModel >
{
typedef _PySequence_ Type;
};
template <>
inline
CovarianceModel
convert< _PySequence_, CovarianceModel >(PyObject * pyObj)
{
return CovarianceModel();
}
template <>
struct traitsPythonType< Process >
{
typedef _PySequence_ Type;
};
template <>
inline
Process
convert< _PySequence_, Process >(PyObject * pyObj)
{
return Process();
}
inline
void handleException()
{
PyObject * exception = PyErr_Occurred();
if ( exception )
{
PyObject *type = NULL, *value = NULL, *traceback = NULL;
PyErr_Fetch( &type, &value, &traceback );
String exceptionMessage("Python exception");
// get the name of the exception
if ( type )
{
ScopedPyObjectPointer nameObj(PyObject_GetAttrString( type, "__name__" ));
if ( nameObj.get() )
{
String typeString = checkAndConvert< _PyString_, String >(nameObj.get());
exceptionMessage += ": " + typeString;
}
}
// try to get error msg, value and traceback can be NULL
if(value)
{
try
{
String valueString = checkAndConvert< _PyString_, String >(value);
exceptionMessage += ": " + valueString;
}
catch( InvalidArgumentException & ex )
{
// could not get msg from strings
}
}
PyErr_Restore( type, value, traceback );
PyErr_Print();
throw InternalException(HERE) << exceptionMessage;
}
}
// PySliceObject type is deprecated
#if PY_VERSION_HEX >= 0x03020000
inline PyObject* SliceCast(PyObject* pyObj)
{
return pyObj;
}
#else
inline PySliceObject* SliceCast(PyObject* pyObj)
{
return (PySliceObject*)pyObj;
}
#endif
inline
void pickleSave(Advocate & adv, PyObject * pyObj)
{
ScopedPyObjectPointer pickleModule(PyImport_ImportModule( "pickle" )); // new reference
assert( pickleModule.get() );
PyObject * pickleDict = PyModule_GetDict( pickleModule.get() );
assert(pickleDict);
PyObject * dumpsMethod = PyDict_GetItemString( pickleDict, "dumps" );
assert( dumpsMethod );
if ( ! PyCallable_Check( dumpsMethod ) )
throw InternalException(HERE) << "Python 'pickle' module has no 'dumps' method";
assert( pyObj );
ScopedPyObjectPointer rawDump(PyObject_CallFunctionObjArgs( dumpsMethod, pyObj, NULL )); // new reference
handleException();
assert( rawDump.get() );
ScopedPyObjectPointer base64Module(PyImport_ImportModule( "base64" )); // new reference
assert( base64Module.get() );
PyObject * base64Dict = PyModule_GetDict( base64Module.get() );
assert( base64Dict );
PyObject * b64encodeMethod = PyDict_GetItemString( base64Dict, "standard_b64encode" );
assert( b64encodeMethod );
if ( ! PyCallable_Check( b64encodeMethod ) )
throw InternalException(HERE) << "Python 'base64' module has no 'standard_b64encode' method";
ScopedPyObjectPointer base64Dump(PyObject_CallFunctionObjArgs( b64encodeMethod, rawDump.get(), NULL )); // new reference
handleException();
assert( base64Dump.get() );
String pyInstanceSt(convert< _PyBytes_, String >( base64Dump.get() ));
adv.saveAttribute( "pyInstance_", pyInstanceSt );
}
inline
void pickleLoad(Advocate & adv, PyObject * & pyObj)
{
String pyInstanceSt;
adv.loadAttribute( "pyInstance_", pyInstanceSt );
ScopedPyObjectPointer base64Dump(convert< String, _PyBytes_ >( pyInstanceSt )); // new reference
assert( base64Dump.get() );
ScopedPyObjectPointer base64Module(PyImport_ImportModule( "base64" )); // new reference
assert( base64Module.get() );
PyObject * base64Dict = PyModule_GetDict( base64Module.get() );
assert( base64Dict );
PyObject * b64decodeMethod = PyDict_GetItemString( base64Dict, "standard_b64decode" );
assert( b64decodeMethod );
if ( ! PyCallable_Check( b64decodeMethod ) )
throw InternalException(HERE) << "Python 'base64' module has no 'standard_b64decode' method";
ScopedPyObjectPointer rawDump(PyObject_CallFunctionObjArgs( b64decodeMethod, base64Dump.get(), NULL )); // new reference
handleException();
assert( rawDump.get() );
ScopedPyObjectPointer pickleModule(PyImport_ImportModule( "pickle" )); // new reference
assert( pickleModule.get() );
PyObject * pickleDict = PyModule_GetDict( pickleModule.get() );
assert( pickleDict );
PyObject * loadsMethod = PyDict_GetItemString( pickleDict, "loads" );
assert( loadsMethod );
if ( ! PyCallable_Check( loadsMethod ) )
throw InternalException(HERE) << "Python 'pickle' module has no 'loads' method";
Py_XDECREF( pyObj );
pyObj = PyObject_CallFunctionObjArgs( loadsMethod, rawDump.get(), NULL ); // new reference
handleException();
assert( pyObj );
}
END_NAMESPACE_OPENTURNS
#endif /* OPENTURNS_PYTHONWRAPPINGFUNCTIONS_HXX */
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