/usr/bin/makeflow_log_parser is in coop-computing-tools 4.0-1ubuntu5.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 | #!/usr/bin/perl
#Programmer: Andrew Thrasher
#Date: 10/12/2009
#Updated: 9/17/2012, need to deal with the added comments throughout the log for events like aborts and restarts
#Purpose: Parse makeflow log files to generate useful logs
$log = $ARGV[0];
open(LOGFILE, "<", $log);
open(SUMMARY, ">", $log.".summary");
open(OUT, ">", "$log.clean");
$line = <LOGFILE>;
#ignore makeflow structure information at the top of the log file and only deal with actual log data
while($line =~ /^#/){
$line = <LOGFILE>;
}
chomp $line;
#get start time from the first line
@fields = split(/ /, $line);
$timestart = $fields[0];
$prior_time = $timestart;
$fields[0] = $fields[0] / 1000000;
foreach $f (@fields){
print OUT "$f ";
}
print OUT "\n";
$goodput;
$badput;
$num_tasks = $fields[9];
@tasks[$num_tasks];
if($fields[2] == 1)
{
#entered running state, store elapsed time (in this case it is the first entry so no time has elapsed
$tasks[$fields[1]] = 0; #$fields[0];
}
elsif($fields[2] == 2)
{
#completed
$goodput += ($fields[0] - $tasks[$fields[1]]);
}
elsif($fields[2] == 3 || $fields[2] == 4)
{
#failed or aborted
$badput += ($fields[0] - $tasks[$fields[1]]);
}
else
{
#went back to waiting
}
#Need to determine the total CPU time
#use number of tasks as indices to each task
$err = 0;
$totaltime = 0;
$err_time;
while($line = <LOGFILE>)
{
chomp $line;
if($line =~ /^#/){
#we're on a restart, abort, etc.
#we need to change the prior time so that we don't count the elapsed time while the makeflow was inactive
$err = 1;
next;
}
@fields = split(/ /, $line);
$time = $fields[0];
if($err){
#the prior line was an error status
#therefore we need to reset the prior time
$err_time += ($time - $prior_time);
$last_err = ($time - $prior_time);
$err = 0;
}
$totaltime += ($time - $prior_time);
#fields: timestamp, work item #, new state, jobID (random id returned by worker), # of nodes waiting, # of nodes running, # of nodes completed, # of nodes failed, # of nodes aborted, # of jobs counter
if($fields[2] == 1)
{
#entered running state, store timestamp
#instead of storing the timestamp, store the elapsed time
$tasks[$fields[1]] = $totaltime;
}
elsif($fields[2] == 2)
{
#completed
$goodput += (($totaltime - $tasks[$fields[1]]) - $last_err);
}
elsif($fields[2] == 3 || $fields[2] == 4)
{
#failed or aborted
$badput += ($totaltime - $tasks[$fields[1]] - $last_err);
}
else
{
#went back to waiting
}
$prior_time = $time;
$fields[0] = $fields[0] / 1000000;
foreach $f (@fields){
print OUT "$f ";
}
print OUT "\n";
}
$totaltime -= $err_time;
$totaltime = $totaltime /1000000;
$goodput = $goodput / 1000000;
$badput = $badput / 1000000;
print SUMMARY "Elapsed Time: ", int($totaltime/(24*60*60)),"+", ($totaltime/(60*60))%24,":", ($totaltime/60)%60,":", $totaltime%60, "\n";
print SUMMARY "Jobs Submitted: ", $fields[9], "\n";
print SUMMARY "Jobs Completed: ", $fields[6], "\n";
print SUMMARY "Goodput: ", int($goodput/(24*60*60)),"+", ($goodput/(60*60))%24,":", ($goodput/60)%60,":", $goodput%60, "\n";
print SUMMARY "Badput: ", int($badput/(24*60*60)),"+", ($badput/(60*60))%24,":", ($badput/60)%60,":", $badput%60, "\n";
$cpu = $goodput + $badput;
print SUMMARY "Total CPU time: ", int($cpu/(24*60*60)),"+", ($cpu/(60*60))%24,":", ($cpu/60)%60,":", $cpu%60, "\n";
open (GNUPLOT, "|gnuplot");
#open (GNUPLOT, ">", "$log.gnuplot");
print GNUPLOT <<EOPLOT;
set terminal postscript solid eps 24 color
set size 2.5,1
set output "$log.eps"
set xdata time
set ylabel "Jobs Submitted / Complete"
set y2label "Jobs Running"
set y2tics
set bmargin 4
set style line 1
set key outside
set timefmt "%s"
plot "$log.clean" using 1:(\$6+\$7+\$8+\$9) title "Submitted" with lines lw 5, "" using 1:6 title "Running" with lines lw 5, "" using 1:7 title "Complete" with lines lw 5
EOPLOT
close(GNUPLOT);
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