/usr/lib/R/site-library/BiocParallel/NAMESPACE is in r-bioc-biocparallel 1.4.0-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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import(futile.logger)
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### Export S4 classes
###
exportClass(
BiocParallelParam,
MulticoreParam,
SnowParam,
DoparParam,
SerialParam,
BatchJobsParam
)
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### Export non-generic functions
###
export(
MulticoreParam, SnowParam, DoparParam, SerialParam, BatchJobsParam,
## register
register, registered, bpparam,
## error handlers
bpresume, bplasterror,
## helpers
multicoreWorkers, snowWorkers, bpvalidate, bpok,
bpslaveLoop, bprunMPIslave
)
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### Export S4 generics and methods defined in BiocParallel
###
export(
bplapply, bpvec, bpvectorize, bpmapply, bpaggregate, bpiterate,
## bp-controls
bpworkers, "bpworkers<-", bpbackend, "bpbackend<-",
bptasks, "bptasks<-", bpjobname, "bpjobname<-",
bpstart, bpstop, bpisup,
bpcatchErrors, "bpcatchErrors<-", bpstopOnError, "bpstopOnError<-",
bpprogressbar, "bpprogressbar<-", bpRNGseed, "bpRNGseed<-",
bptimeout, "bptimeout<-", bplog, "bplog<-", bplogdir, "bplogdir<-",
bpthreshold, "bpthreshold<-", bpresultdir, "bpresultdir<-",
## schedule
bpschedule
)
### Same list as above.
exportMethods(
bplapply, bpvec, bpvectorize, bpmapply, bpaggregate, bpiterate,
## bp-controls
bpworkers, "bpworkers<-", bpbackend, "bpbackend<-",
bptasks, "bptasks<-", bpjobname, "bpjobname<-",
bpstart, bpstop, bpisup,
bpcatchErrors, "bpcatchErrors<-", bpstopOnError, "bpstopOnError<-",
bpprogressbar, "bpprogressbar<-", bpRNGseed, "bpRNGseed<-",
bptimeout, "bptimeout<-", bplog, "bplog<-", bplogdir, "bplogdir<-",
bpthreshold, "bpthreshold<-", bpresultdir, "bpresultdir<-",
## schedule
bpschedule
)
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### Export S4 methods for generics not defined in BiocParallel
###
exportMethods(
show
)
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### Export S3 methods
###
export(`print.remote-error`)
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