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citEntry(
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# BibTeX entry:
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entry = "Article",
author = "H. Bengtsson and Pierre Neuvial and Terence P Speed",
title = "TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays",
journal = "BMC Bioinformatics",
year = "2010",
month = "May",
volume = "11",
number = "245",
doi = "10.1186/1471-2105-11-245",
url = "http://www.biomedcentral.com/1471-2105/11/245/",
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# Plain-text citation:
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textVersion = paste(sep="",
"H. Bengtsson, P. Neuvial and T.P. Speed. ",
"TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays, ",
"BMC Bioinformatics, ",
"2010"
)
);
citEntry(
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# BibTeX entry:
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entry = "Article",
author = "Henrik Bengtsson and Amrita Ray and Paul Spellman and Terence P Speed",
title = "A single-sample method for normalizing and combining full-resolutioncopy numbers from multiple platforms, labs and analysis methods",
journal = "Bioinformatics",
year = "2009",
volume = "25",
number = "7",
doi = "10.1093/bioinformatics/btp074",
url = "http://bioinformatics.oxfordjournals.org/cgi/content/full/25/7/861",
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# Plain-text citation:
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textVersion = paste(sep="",
"H. Bengtsson, A. Ray, P. Spellman and T.P. Speed. ",
"A single-sample method for normalizing and combining full-resolutioncopy numbers from multiple platforms, labs and analysis methods, ",
"Bioinformatics, ",
"2009"
)
);
citEntry(
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# BibTeX entry:
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entry="TechReport",
author = "H. Bengtsson and K. Simpson and J. Bullard and K. Hansen",
title = "{aroma.affymetrix}: A generic framework in {R} for analyzing small
to very large {Affymetrix} data sets in bounded memory",
institution = "Department of Statistics, University of California, Berkeley",
year = "2008",
month = "February",
number = "745",
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# Plain-text citation:
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textVersion = paste(sep="",
"H. Bengtsson; K. Simpson; J. Bullard; K. Hansen. ",
"aroma.affymetrix: A generic framework in R for analyzing small to very large Affymetrix data sets in bounded memory, ",
"Tech Report 745, ",
"Department of Statistics, University of California, Berkeley, ",
"February 2008"
)
);
citEntry(
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# BibTeX entry:
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entry="Article",
author = "Henrik Bengtsson and R. Irizarry and B. Carvalho and T.P. Speed",
title = "Estimation and assessment of raw copy numbers at the single locus level",
journal = "Bioinformatics",
year = "2008",
volume = "24",
number = "6",
url = "http://bioinformatics.oxfordjournals.org/cgi/content/full/24/6/759",
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# Plain-text citation:
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textVersion = paste(sep="",
"H. Bengtsson, R. Irizarry, B. Carvalho, & T.P. Speed. ",
"Estimation and assessment of raw copy numbers at the single locus level, ",
"Bioinformatics, ",
"2008"
)
);
citEntry(
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# BibTeX entry:
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entry="Article",
author = "H. Bengtsson and O. H{\"o}ssjer",
title = "Methodological study of affine transformations of gene
expressiondata with proposed robust non-parametric multi-dimensional
normalization method",
journal = "BMC Bioinformatics",
year = "2006",
volume = "7",
number = "100",
doi = "10.1186/1471-2105-7-100",
url = "http://www.biomedcentral.com/1471-2105/7/100",
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# Plain-text citation:
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textVersion = paste(sep="",
"H. Bengtsson & O. Hössjer. ",
"Methodological study of affine transformations of gene expressiondata
with proposed robust non-parametric multi-dimensional normalization
method, ",
"BMC Bioinformatics, ",
"2006"
)
);
citEntry(
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# BibTeX entry:
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entry="Article",
author = "H. Bengtsson and G. J\"{o}nsson and J. Vallon-Christersson",
title = "Calibration and assessment of channel-specific biases in microarray
data with extended dynamical range",
journal = "BMC Bioinformatics",
year = "2004",
volume = "5",
number = "177",
doi = "10.1186/1471-2105-5-177",
url = "http://www.biomedcentral.com/1471-2105/5/177",
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# Plain-text citation:
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textVersion = paste(sep="",
"H. Bengtsson, G. Jönsson & J. Vallon-Christersson. ",
"Calibration and assessment of channel-specific biases in microarray data with extended dynamical range, ",
"BMC Bioinformatics, ",
"2004"
)
);
citEntry(
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# BibTeX entry:
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entry="TechReport",
author = "H. Bengtsson",
title = "{aroma} - {A}n {R} {O}bject-oriented {M}icroarray {A}nalysis environment}",
type = "Preprint in Mathematical Sciences",
institution = "Mathematical Statistics, Centre for Mathematical Sciences, Lund University, Sweden",
year = "2004",
number = "18",
url = "http://www1.maths.lth.se/bioinformatics/publications/",
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# Plain-text citation:
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textVersion = paste(sep="",
"H. Bengtsson. ",
"aroma - An R Object-oriented Microarray Analysis environment, ",
"Preprint 2004:18, ",
"Centre for Mathematical Sciences, Lund University, ",
"2004"
)
);
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