/usr/share/perl5/GO/xsl/oboxml_filter.xsl is in libgo-perl 0.15-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 | <?xml version="1.0" encoding="utf-8"?>
<!-- AUTHOR: Chris Mungall :: cjm at fruitfly dot org -->
<!-- to filter out anonymous terms, use arg filter_anonymous=1 -->
<!-- usage: -->
<!-- xsltproc xsl/oboxml_filter.xsl -param filter_anonymous 1 -stringparam namespace cellular_component my.obo.xml -->
<xsl:stylesheet xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
version="1.0">
<xsl:strip-space elements="*"/>
<xsl:param name="namespace"/>
<xsl:param name="filter_anonymous"/>
<xsl:param name="filter_named"/>
<xsl:output indent="yes" method="xml"/>
<xsl:template match="term">
<xsl:choose>
<xsl:when test="$filter_anonymous and (($filter_anonymous != 0 and is_anonymous != 0) or ($filter_named = 0 and is_anonymous != 1))">
<!-- do nothing -->
</xsl:when>
<xsl:when test="$namespace and namespace != $namespace">
</xsl:when>
<xsl:otherwise>
<xsl:copy>
<xsl:apply-templates select="@* | node()" />
</xsl:copy>
</xsl:otherwise>
</xsl:choose>
</xsl:template>
<!-- match everything else -->
<xsl:template match="/ | @* | node()">
<xsl:copy>
<xsl:apply-templates select="@* | node()" />
</xsl:copy>
</xsl:template>
</xsl:stylesheet>
|