/usr/share/perl5/GO/Handlers/go_def.pm is in libgo-perl 0.15-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 | # $Id: go_def.pm,v 1.3 2005/03/22 04:51:08 cmungall Exp $
#
# This GO module is maintained by Chris Mungall <cjm@fruitfly.org>
#
# see also - http://www.geneontology.org
# - http://www.godatabase.org/dev
#
# You may distribute this module under the same terms as perl itself
=head1 NAME
GO::Handlers::go_def - go_def handler
=head1 SYNOPSIS
use GO::Handlers::go_def
=cut
=head1 DESCRIPTION
=head1 PUBLIC METHODS -
=cut
# makes objects from parser events
package GO::Handlers::go_def;
use GO::Parsers::ParserEventNames;
use Data::Stag qw(:all);
use base qw(GO::Handlers::base);
use strict;
sub e_term {
my $self = shift;
my $t = shift;
my $n = stag_get($t, NAME);
my $def = stag_get($t, DEF);
if ($def) {
$self->tag(term => $n);
$self->tag(goid => stag_sget($t, ID));
$self->tag(definition => stag_sget($def, DEFSTR));
$self->tag(definition_reference => stag_sget($_,DBNAME).':'.stag_sget($_,ACC)) foreach stag_get($def, DBXREF);
$self->tag(comment => stag_sget($t, COMMENT));
$self->print("\n");
}
return;
}
sub tag {
my $self = shift;
my ($t, $v) = @_;
return unless $v;
$self->printf("%s: %s\n", $t, $v);
return;
}
1;
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