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/usr/share/gluegen2/make/scripts/java-win64.bat is in libgluegen2-build-java 2.3.2-3.

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set BLD_SUB=build-win64
set J2RE_HOME=c:\jre1.8.0_60_x64
set JAVA_HOME=c:\jdk1.8.0_60_x64
set ANT_PATH=C:\apache-ant-1.9.4

set BLD_DIR=..\%BLD_SUB%
REM set LIB_DIR=..\%BLD_SUB%\obj;..\%BLD_SUB%\test\build\natives
REM set LIB_DIR=..\%BLD_SUB%\test\build\natives

REM set PATH=%JAVA_HOME%\bin;%ANT_PATH%\bin;c:\mingw\bin;%LIB_DIR%;%PATH%
set PATH=%JAVA_HOME%\bin;%ANT_PATH%\bin;c:\mingw\bin;%PATH%

set CP_ALL=.;lib\junit.jar;%ANT_PATH%\lib\ant.jar;%ANT_PATH%\lib\ant-junit.jar;lib/semantic-versioning/semver.jar;lib\TestJarsInJar.jar;%BLD_DIR%\gluegen-rt.jar;%BLD_DIR%\gluegen.jar;%BLD_DIR%\gluegen-test-util.jar;%BLD_DIR%\test\build\gluegen-test.jar

echo CP_ALL %CP_ALL%

set X_ARGS="-Drootrel.build=%BLD_SUB%" "-Dgluegen.root=.."
REM set D_ARGS="-Djogamp.debug.IOUtil" "-Djogamp.debug.JNILibLoader" "-Djogamp.debug.TempFileCache" "-Djogamp.debug.JarUtil" "-Djogamp.debug.TempJarCache"
REM set D_ARGS="-Djogamp.debug.Platform" "-Djogamp.debug.NativeLibrary" "-Djogamp.debug.IOUtil"
set D_ARGS="-Djogamp.debug.IOUtil" "-Djogamp.debug.IOUtil.Exe" "-Djogamp.debug.IOUtil.Exe.NoStream"
REM set D_ARGS="-Djogamp.debug=all"

REM %J2RE_HOME%\bin\java -classpath %CP_ALL% %X_ARGS% %D_ARGS% "-Djava.library.path=%LIB_DIR%" "-Dsun.java2d.noddraw=true" "-Dsun.awt.noerasebackground=true" %1 %2 %3 %4 %5 %6 %7 %8 %9 > java-win64.log 2>&1
%J2RE_HOME%\bin\java -classpath %CP_ALL% %X_ARGS% %D_ARGS% "-Dsun.java2d.noddraw=true" "-Dsun.awt.noerasebackground=true" %1 %2 %3 %4 %5 %6 %7 %8 %9 > java-win64.log 2>&1