/usr/share/gmod/chado/soi/ is in libchado-perl 1.23-5.
This file is owned by root:root, with mode 0o755.
..
/usr/share/gmod/chado/soi/README
/usr/share/gmod/chado/soi/SOI/
/usr/share/gmod/chado/soi/SOI/Adapter.pm
/usr/share/gmod/chado/soi/SOI/Feature.pm
/usr/share/gmod/chado/soi/SOI/FeatureDecor.pm
/usr/share/gmod/chado/soi/SOI/GAMEHandler.pm
/usr/share/gmod/chado/soi/SOI/GFF3Parser.pm
/usr/share/gmod/chado/soi/SOI/IntersectGraph.pm
/usr/share/gmod/chado/soi/SOI/Outputter.pm
/usr/share/gmod/chado/soi/SOI/SOIHandler.pm
/usr/share/gmod/chado/soi/SOI/Visitor.pm
/usr/share/gmod/chado/soi/cgi/
/usr/share/gmod/chado/soi/cgi/get_xml.pl
/usr/share/gmod/chado/soi/scripts/
/usr/share/gmod/chado/soi/scripts/dump_fasta.pl
/usr/share/gmod/chado/soi/scripts/dump_segment.pl
/usr/share/gmod/chado/soi/scripts/generegion.pl
/usr/share/gmod/chado/soi/t/
/usr/share/gmod/chado/soi/t/data/
/usr/share/gmod/chado/soi/t/data/AE003790.cDNA.game.xml
/usr/share/gmod/chado/soi/t/data/AE003790.soi.xml
/usr/share/gmod/chado/soi/t/t_soi_parse_intersect
/usr/share/gmod/chado/soi/templates/
/usr/share/gmod/chado/soi/templates/features_by_name.soi
/usr/share/gmod/chado/soi/templates/genes_by_GO_term.soi
/usr/share/gmod/chado/soi/templates/genes_by_child_count.soi
/usr/share/gmod/chado/soi/templates/top_typed_feature.soi
/usr/share/gmod/chado/soi/templates/top_typed_feature_no_soi.soi
/usr/share/gmod/chado/soi/templates/typed_genes.soi