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/usr/src/gcc-4.9/debian/patches/libjava-fixed-symlinks.diff is in gcc-4.9-source 4.9.3-13ubuntu2.

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# DP: Remove unneed '..' elements from symlinks in JAVA_HOME

Index: b/src/libjava/Makefile.am
===================================================================
--- a/src/libjava/Makefile.am
+++ b/src/libjava/Makefile.am
@@ -836,7 +836,7 @@ if CREATE_JAVA_HOME
 	$(mkinstalldirs) $(DESTDIR)$(SDK_INCLUDE_DIR)/$(OS)
 	relative() { \
 	  $(PERL) -e 'use File::Spec; \
-	    print File::Spec->abs2rel($$ARGV[0], $$ARGV[1])' $$1 $$2; \
+	    print File::Spec->abs2rel($$ARGV[0], $$ARGV[1])' $$1 $$2 | sed -r 's,(bin|lib)[^/]*/\.\./,,'; \
 	}; \
 	RELATIVE=$$(relative $(DESTDIR)$(bindir) $(DESTDIR)$(SDK_BIN_DIR)); \
 	ln -sf $$RELATIVE/`echo gij | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'` \
Index: b/src/libjava/Makefile.in
===================================================================
--- a/src/libjava/Makefile.in
+++ b/src/libjava/Makefile.in
@@ -12506,7 +12506,7 @@ install-data-local:
 @CREATE_JAVA_HOME_TRUE@	$(mkinstalldirs) $(DESTDIR)$(SDK_INCLUDE_DIR)/$(OS)
 @CREATE_JAVA_HOME_TRUE@	relative() { \
 @CREATE_JAVA_HOME_TRUE@	  $(PERL) -e 'use File::Spec; \
-@CREATE_JAVA_HOME_TRUE@	    print File::Spec->abs2rel($$ARGV[0], $$ARGV[1])' $$1 $$2; \
+@CREATE_JAVA_HOME_TRUE@	    print File::Spec->abs2rel($$ARGV[0], $$ARGV[1])' $$1 $$2 | sed -r 's,(bin|lib)[^/]*/\.\./,,'; \
 @CREATE_JAVA_HOME_TRUE@	}; \
 @CREATE_JAVA_HOME_TRUE@	RELATIVE=$$(relative $(DESTDIR)$(bindir) $(DESTDIR)$(SDK_BIN_DIR)); \
 @CREATE_JAVA_HOME_TRUE@	ln -sf $$RELATIVE/`echo gij | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'` \