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<html>

<head>
<title>
Garlic Documentation
</title>
</head>

<h1 align=center>
Garlic Documentation
</h1>

<hr size="3">

<font size="-1" color=RED>
garlic,
free molecular viewer and editor,
free molecular visualization program,
protein structure, DNA structure, PDB,
molecular rendering, biological macromolecule,
Unix, Linux, free software download, open source software,
Damir Zucic.
</font>

<hr size="3">

Copyright (C) 2004-2006 Damir Zucic. Permission is granted to copy,
distribute and/or modify this document under the terms of the
<a href="http://www.gnu.org/copyleft/fdl.html#TOC1">
GNU Free Documentation License,
</a>
Version 1.2 or any later version published by the Free Software Foundation;
with no Invariant Sections, no Front-Cover Texts, and no Back-Cover
Texts. A local copy of the license is included
<a href="fdl.html">
here
</a>
.

<hr size="3">

<b>
Garlic documentation is written in html format. The sections are listed below,
with a brief description. Newbies are recommended to read at least parts of
each section. The most important (and the most extensive) section is the
one with garlic commands.
</b>

<hr size="3">

<table border=0 cellspacing=10 cellpading=0>

<td align="left">
<b>
<a href="features/index.html">
Garlic Features
</a>
</b>
</td>

<td align="left">
An overview of garlic features.
</td>

<tr>

<td align="left">
<b>
<a href="controls/index.html">
Controls
</a>
</b>
</td>

<td align="left">
Reserved keys: rotations, translations, slab and color.
</td>

<tr>

<td align="left" bgcolor="yellow">
<b>
<a href="commands/index.html">
Commands
</a>
</b>
</td>

<td align="left" bgcolor="yellow">
Detailed descriptions of garlic commands.
</td>

<tr>

<td align="left">
<b>
<a href="mouse/index.html">
Mouse Usage
</a>
</b>
</td>

<td align="left">
Mouse tricks specific for garlic.
</td>

<tr>

<td align="left">
<b>
<a href="refcard/index.html">
Reference Card
</a>
</b>
</td>

<td align="left">
A quick reminder, both for newbies and experienced users.
</td>

<tr>

<td align="left">
<b>
<a href="tutorial/index.html">
Tutorial
</a>
</b>
</td>

<td align="left">
A collection of lessons and demonstration scripts.
</td>

<tr>

<td align="left">
<b>
<a href="options/index.html">
Options
</a>
</b>
</td>

<td align="left">
Command line options.
</td>

<tr>

<td align="left">
<b>
<a href="config/index.html">
Configuration File
</a>
</b>
</td>

<td align="left">
Configuration file for garlic, called .garlicrc (for experts).
</td>

<tr>

<td align="left">
<b>
<a href="install/mol_path.html">
Environment Variables
</a>
</b>
</td>

<td align="left">
Environment variables recognized by garlic.
</td>

<tr>

<td align="left">
<b>
<a href="data/index.html">
Molecular Structures
</a>
</b>
</td>

<td align="left">
Proteins, nucleic acids and hetero compounds.
</td>

</table>

<hr size="3">

</html>