/usr/lib/R/site-library/msm/INDEX is in r-cran-msm 1.1.4-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 | MatrixExp Matrix exponential
aneur Aortic aneurysm progression data
boot.msm Bootstrap resampling for multi-state models
bos Bronchiolitis obliterans syndrome after lung
transplants
cav Heart transplant monitoring data
coef.msm Extract model coefficients
crudeinits.msm Calculate crude initial values for transition
intensities
deltamethod The delta method
ematrix.msm Misclassification probability matrix
fev FEV1 measurements from lung transplant
recipients
hazard.msm Calculate tables of hazard ratios for
covariates on transition intensities
hmm-dists Hidden Markov model constructors
logLik.msm Extract model log-likelihood
lrtest.msm Likelihood ratio test
medists Measurement error distributions
msm Multi-state Markov and hidden Markov models in
continuous time
odds.msm Calculate tables of odds ratios for covariates
on misclassification probabilities
pearson.msm Pearson-type goodness-of-fit test
pexp Exponential distribution with
piecewise-constant rate
plot.msm Plots of multi-state models
plot.prevalence.msm Plot of observed and expected prevalences
plot.survfit.msm Plot empirical and fitted survival curves
plotprog.msm Kaplan Meier estimates of incidence
pmatrix.msm Transition probability matrix
pmatrix.piecewise.msm Transition probability matrix for processes
with piecewise-constant intensities
pnext.msm Probability of each state being next
prevalence.msm Tables of observed and expected prevalences
psor Psoriatic arthritis data
qmatrix.msm Transition intensity matrix
qratio.msm Estimated ratio of transition intensities
scoreresid.msm Score residuals
sim.msm Simulate one individual trajectory from a
continuous-time Markov model
simmulti.msm Simulate multiple trajectories from a
multi-state Markov model with arbitrary
observation times
sojourn.msm Mean sojourn times from a multi-state model
statetable.msm Table of transitions
summary.msm Summarise a fitted multi-state model
surface.msm Explore the likelihood surface
tnorm Truncated Normal distribution
totlos.msm Total length of stay
transient.msm Transient and absorbing states
viterbi.msm Calculate the most likely path through
underlying states
|