/usr/lib/oar/oardel is in oar-user 2.5.2-4.1.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
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# $Id$
# delete a job
use strict;
use warnings;
use Data::Dumper;
use DBI();
use OAR::IO;
#use IO::Socket::INET;
use OAR::Conf qw(init_conf dump_conf get_conf is_conf);
use OAR::Tools;
use Getopt::Long;
use OAR::Version;
my $Old_umask = sprintf("%lo",umask());
umask(oct("022"));
my $exitValue = 0;
# Display command help
sub usage {
print <<EOS;
Usage: $0 [-c|-b|-s][--array][job_ids][-h][-V]
Delete or send checkpoint signal to jobs.
Options:
-h, --help show this help screen
-c, --checkpoint send checkpoint signal to the job_ids
-s, --signal send the signal given as parameter to the job_ids
-b, --besteffort tag specified jobs as besteffort (or remove it
if they are already besteffort)
--array delete/checkpoint array job(s) passed as parameter
(all the sub-jobs)
--sql delete/checkpoint jobs which respond to the SQL
where clause on the table jobs
(ex: "project = 'p1'")
-V, --version print OAR version number
EOS
exit(1);
}
# Retrieve informations from OAR configuration file
init_conf($ENV{OARCONFFILE});
my $remote_host = get_conf("SERVER_HOSTNAME");
my $remote_port = get_conf("SERVER_PORT");
my $Openssh_cmd = get_conf("OPENSSH_CMD");
$Openssh_cmd = OAR::Tools::get_default_openssh_cmd() if (!defined($Openssh_cmd));
if (is_conf("OAR_RUNTIME_DIRECTORY")){
OAR::Tools::set_default_oarexec_directory(get_conf("OAR_RUNTIME_DIRECTORY"));
}
if (is_conf("OAR_SSH_CONNECTION_TIMEOUT")){
OAR::Tools::set_ssh_timeout(get_conf("OAR_SSH_CONNECTION_TIMEOUT"));
}
my $Deploy_hostname = get_conf("DEPLOY_HOSTNAME");
if (!defined($Deploy_hostname)){
$Deploy_hostname = $remote_host;
}
my $Cosystem_hostname = get_conf("COSYSTEM_HOSTNAME");
if (!defined($Cosystem_hostname)){
$Cosystem_hostname = $remote_host;
}
# Parse command line
Getopt::Long::Configure("gnu_getopt");
my $Checkpoint;
my $signal;
my $sos;
my $Version;
my $Sql_property;
my $Besteffort;
my $array;
GetOptions ("checkpoint|c" => \$Checkpoint,
"signal|s:s" => \$signal,
"besteffort|b" => \$Besteffort,
"help|h" => \$sos,
"array" => \$array,
"sql=s" => \$Sql_property,
"version|V" => \$Version
);
if (defined($sos)){
usage();
exit(0);
}
if (defined($Version)){
print("OAR version : ".OAR::Version::get_version()."\n");
exit(0);
}
if (($#ARGV < 0) and (!defined($Sql_property))){
usage();
exit(1);
}
my @job_ids;
foreach my $j (@ARGV){
if ($j =~ m/^\d+$/m){
#if defined --array, delete all the sub-jobs
if(defined($array)){
my $db = OAR::IO::connect_ro();
my @tmp_jobs = OAR::IO::get_array_job_ids($db,$j);
if(scalar @tmp_jobs == 0){
warn("[ERROR] \"$j\" is not a valid array job\n");
$exitValue = 4;
}else{
foreach my $j (@tmp_jobs){
push(@job_ids, $j);
}
}
OAR::IO::disconnect($db);
}else{
push(@job_ids, $j);
}
}else{
if(defined($array)){
warn("[ERROR] \"$j\" is not a valid job array identifier\n");
}else{
warn("[ERROR] \"$j\" is not a valid job identifier\n");
}
$exitValue = 4;
}
}
if (defined($Sql_property)){
my $db = OAR::IO::connect_ro();
foreach my $j (OAR::IO::get_jobs_with_given_properties($db,$Sql_property)){
push(@job_ids, $j->{job_id});
}
OAR::IO::disconnect($db);
}
my $base = OAR::IO::connect();
# oardel is used to checkpoint some jobs
if (defined($Checkpoint)){
foreach my $idJob (@job_ids){
print("Checkpointing the job $idJob ...");
# Try to insert checkpoint information in the database
my $err = OAR::IO::ask_checkpoint_job($base,$idJob);
if ($err > 0) {
print("ERROR.\n");
if ($err == 1){
warn("Cannot checkpoint $idJob ; You are not the right user.\n");
$exitValue = 1;
}elsif ($err == 3){
warn("Cannot checkpoint $idJob ; The job is Interactive.\n");
$exitValue = 7;
}else{
warn("Cannot checkpoint $idJob ; This job is not running.\n");
$exitValue = 5;
}
}else{
my $strComment;
# Retrieve node names used by the job
my @hosts = OAR::IO::get_job_current_hostnames($base,$idJob);
my $types = OAR::IO::get_current_job_types($base,$idJob);
my $host_to_connect = $hosts[0];
if ((defined($types->{cosystem})) or ($#hosts < 0)){
$host_to_connect = $Cosystem_hostname;
}elsif (defined($types->{deploy})){
$host_to_connect = $Deploy_hostname;
}
my $timeoutSSH = OAR::Tools::get_ssh_timeout();
# Timeout the ssh command
eval {
$SIG{ALRM} = sub { die "alarm\n" };
alarm($timeoutSSH);
OAR::Tools::signal_oarexec($host_to_connect,$idJob,"SIGUSR2",1, $base, $Openssh_cmd, '');
alarm(0);
};
if ($@){
print("ERROR.\n");
if ($@ eq "alarm\n"){
$exitValue = 3;
$strComment = "Cannot contact $host_to_connect, operation timouted ($timeoutSSH s).";
warn("$strComment\n");
OAR::IO::add_new_event($base,"CHECKPOINT_ERROR",$idJob,$strComment);
}else{
$strComment = "An unknown error occured.";
warn("$strComment\n");
OAR::IO::add_new_event($base,"CHECKPOINT_ERROR",$idJob,$strComment);
}
}else{
print("DONE.\n");
$strComment = "The job $idJob was notified to checkpoint itself on $host_to_connect.";
print("$strComment\n");
OAR::IO::add_new_event($base,"CHECKPOINT_SUCCESS",$idJob,$strComment);
}
}
}
}elsif (defined($signal)){
foreach my $idJob (@job_ids){
print("Signaling the job $idJob with $signal signal.\n");
# Try to insert signal information in the database
my $err = OAR::IO::ask_signal_job($base,$idJob,$signal);
if ($err > 0) {
print("ERROR.\n");
if ($err == 1){
warn("Cannot signal $idJob ; You are not the right user.\n");
$exitValue = 1;
}elsif ($err == 3){
warn("Cannot signal $idJob ; The job is Interactive.\n");
$exitValue = 7;
}else{
warn("Cannot signal $idJob ; This job is not running.\n");
$exitValue = 5;
}
}else{
my $strComment;
# Retrieve node names used by the job
my @hosts = OAR::IO::get_job_current_hostnames($base,$idJob);
my $types = OAR::IO::get_current_job_types($base,$idJob);
my $host_to_connect = $hosts[0];
if ((defined($types->{cosystem})) or ($#hosts < 0)){
$host_to_connect = $Cosystem_hostname;
}elsif (defined($types->{deploy})){
$host_to_connect = $Deploy_hostname;
}
my $timeoutSSH = OAR::Tools::get_ssh_timeout();
# Timeout the ssh command
eval {
$SIG{ALRM} = sub { die "alarm\n" };
alarm($timeoutSSH);
OAR::Tools::signal_oarexec($host_to_connect,$idJob,"SIGURG",1, $base, $Openssh_cmd, $signal);
alarm(0);
};
if ($@){
print("ERROR.\n");
if ($@ eq "alarm\n"){
$exitValue = 3;
$strComment = "Cannot contact $host_to_connect, operation timouted ($timeoutSSH s).";
warn("$strComment\n");
OAR::IO::add_new_event($base,"SIG_ERROR",$idJob,$strComment);
}else{
$strComment = "An unknown error occured.";
warn("$strComment\n");
OAR::IO::add_new_event($base,"SIG_ERROR",$idJob,$strComment);
}
}else{
print("DONE.\n");
$strComment = "The job $idJob was notified to signal itself with $signal on $host_to_connect.";
print("$strComment\n");
OAR::IO::add_new_event($base,"SIG_SUCCESS",$idJob,$strComment);
}
}
}
}elsif (defined($Besteffort)){
my $lusr= $ENV{OARDO_USER};
if (($lusr ne "oar") and ($lusr ne "root")){
$exitValue = 8;
warn("You must be oar or root to use the -b option\n");
}else{
foreach my $j (@job_ids){
OAR::IO::lock_table($base,["jobs","job_types","resources","assigned_resources","event_logs"]);
my $job = OAR::IO::get_job($base, $j);
if (defined($job->{state}) and ($job->{state} eq "Running")){
my $types = OAR::IO::get_current_job_types($base,$j);
if (defined($types->{besteffort})){
OAR::IO::update_current_scheduler_priority($base,$job->{job_id},$job->{assigned_moldable_job},"-2","STOP");
OAR::IO::remove_current_job_types($base,$job->{job_id},"besteffort");
OAR::IO::add_new_event($base,"DELETE_BESTEFFORT_JOB_TYPE",$job->{job_id},"[oardel] User $lusr removed the besteffort type.");
print("Remove besteffort type for the job $j.\n");
}else{
OAR::IO::add_current_job_types($base,$job->{job_id},"besteffort");
OAR::IO::update_current_scheduler_priority($base,$job->{job_id},$job->{assigned_moldable_job},"+2","START");
OAR::IO::add_new_event($base,"ADD_BESTEFFORT_JOB_TYPE",$job->{job_id},"[oardel] User $lusr added the besteffort type.");
print("Add besteffort type for the job $j.\n");
}
}else{
$exitValue = 9;
warn("The job $j is not in the Running state.\n");
}
OAR::IO::unlock_table($base);
}
OAR::IO::disconnect($base);
my $strError = OAR::Tools::notify_tcp_socket($remote_host,$remote_port,"Term");
if (defined($strError)){
warn("$strError\n");
$exitValue = 2;
}
}
}else{
# oardel is used to delete some jobs
my @jobRegistered;
foreach my $idJob (@job_ids) {
print("Deleting the job = $idJob ...");
# Try to insert delete informations in the database
OAR::IO::lock_table($base,["frag_jobs","event_logs","jobs"]);
my $err = OAR::IO::frag_job($base,$idJob);
OAR::IO::unlock_table($base);
if ($err == -1) {
print("ERROR.\n");
warn("Cannot frag $idJob ; You are not the right user.\n");
$exitValue = 1;
}elsif ($err == -2){
print("ERROR.\n");
warn("Cannot frag $idJob ; This job was already killed.\n");
$exitValue = 6;
}else{
print("REGISTERED.\n");
push(@jobRegistered,$idJob);
}
}
OAR::IO::disconnect($base);
if (@jobRegistered){
#Signal Almigthy
my $strError = OAR::Tools::notify_tcp_socket($remote_host,$remote_port,"ChState");
$strError = OAR::Tools::notify_tcp_socket($remote_host,$remote_port,"Qdel") if (!defined($strError));
if (defined($strError)){
warn("$strError\n");
$exitValue = 2;
}else{
print("The job(s) [ @jobRegistered ] will be deleted in a near future.\n");
}
}
}
exit($exitValue);
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