This file is indexed.

/usr/share/nip2/compat/7.12/Matrix.def is in nip2 7.38.1-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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Matrix_build_item = class 
	Menupullright "_New" "make a new matrix of some sort" {

	Plain_item = class 
		Menuaction "_Plain" "make a new plain matrix widget" {
		action = Matrix (identity_matrix 3);
	}

	Convolution_item = class 
		Menuaction "_Convolution" "make a new convolution matrix widget" {
		action = Matrix_con 1 0 [[0, 0, 0], [0, 1, 0], [0, 0, 0]];
	}

	Recombination_item = class 
		Menuaction "_Recombination" 
			"make a new recombination matrix widget" {
		action = Matrix_rec (identity_matrix 3);
	}

	Morphology_item = class 
		Menuaction "_Morphology" "make a new morphology matrix widget" {
		action = Matrix_mor [[0, 0, 0], [0, 255, 0], [0, 0, 0]];
	}

	sep1 = Menuseparator;

	Matrix_gaussian_item = class 
		Menuaction "_Gaussian" "make a gaussian matrix" {
		action = class
			_result {
			_vislevel = 3;

			s = Scale "Sigma" 0.001 10 1;
			ma = Scale "Minimum amplitude" 0 1 0.2;
			integer = Toggle "Integer" false;

			_result 
				= fn s.value ma.value
			{
				fn
					= im_gauss_imask, integer
					= im_gauss_dmask;
			}
		}
	}

	Matrix_laplacian_item = class 
		Menuaction "_Laplacian" "make the Laplacian of a Gaussian matrix" {
		action = class
			_result {
			_vislevel = 3;

			s = Scale "Sigma" 0.001 10 1.5;
			ma = Scale "Minimum amplitude" 0 1 0.1;
			integer = Toggle "Integer" false;

			_result 
				= fn s.value ma.value
			{
				fn
					= im_log_imask, integer
					= im_log_dmask;
			}
		}
	}
}

Matrix_to_matrix_item = class
	Menuaction "Con_vert to Matrix" "convert anything to a matrix" {
	action x = to_matrix x;
}

#separator

Matrix_extract_item = class
	Menupullright "_Extract" "extract rows or columns from a matrix" {
	Rows_item = class
		Menuaction "_Rows" "extract rows" {
		action x = class
			_result {
			_vislevel = 3;

			first = Expression "Extract from row" 0;
			number = Expression "Extract this many rows" 1;

			_result 
				= map_unary process x
			{
				process x
					= extract_area 0 first (get_width x) number x;
			}
		}
	}

	Columns_item = class
		Menuaction "_Columns" "extract columns" {
		action x = class
			_result {
			_vislevel = 3;

			first = Expression "Extract from column" 0;
			number = Expression "Extract this many columns" 1;

			_result 
				= map_unary process x
			{
				process mat
					= extract_area first 0 number (get_height x) x;
			}
		}
	}

	Area_item = class
		Menuaction "_Area" "extract area" {
		action x = class
			_result {
			_vislevel = 3;

			left = Expression "First column" 0;
			top = Expression "First row" 0;
			width = Expression "Number of columns" 1;
			height = Expression "Number of rows" 1;

			_result 
				= map_unary process x
			{
				process mat
					= extract_area left top width height x;
			}
		}
	}

	Diagonal_item = class
		Menuaction "_Diagonal" "extract diagonal" {
		action x = class
			_result {
			_vislevel = 3;

			which = Option "Extract" [
				"Leading Diagonal",
				"Trailing Diagonal"
			] 0;

			_result 
				= map_unary process x
			{
				process mat
					= mat.Matrix_base (map2 extr [0..] mat.value),
						which == 0
					= mat.Matrix_base (map2 extr 
						[mat.width - 1, mat.width - 2 .. 0] mat.value);
				extr n l = [l?n];
			}
		}
	}
}

Matrix_insert_item = class
	Menupullright "_Insert" "insert rows or columns into a matrix" {
	// make a new 8-bit uchar image of wxh with pixels set to p
	// use to generate new cells
	newim w h p
		= image_new w h 1 
			Image_format.UCHAR Image_coding.NOCODING Image_type.B_W p 0 0;

	Rows_item = class
		Menuaction "_Rows" "insert rows" {
		action x = class
			_result {
			_vislevel = 3;

			first = Expression "Insert at row" 0;
			number = Expression "Insert this many rows" 1;
			item = Expression "Set new cells to" 0;

			_result 
				= map_unary process x
			{
				process x
					= foldl1 (converse join_tb) (concat [top, new, bottom])
				{
					top 
						= [extract_area 0 0 w f x], f > 0
						= [];
					new = [(if is_Matrix x then to_matrix else id) 
						(newim w number item.expr)];
					bottom 
						= [extract_area 0 f w (h - f) x], f < h
						= [];

					f = to_real first;
					w = get_width x;
					h = get_height x;
				}
			}
		}
	}

	Columns_item = class
		Menuaction "_Columns" "insert columns" {
		action x = class
			_result {
			_vislevel = 3;

			first = Expression "Insert at column" 0;
			number = Expression "Insert this many columns" 1;
			item = Expression "Set new cells to" 0;

			_result 
				= map_unary process x
			{
				process x
					= foldl1 (converse join_lr) (concat [left, new, right])
				{
					left 
						= [extract_area 0 0 f h x], f > 0
						= [];
					new = [(if is_Matrix x then to_matrix else id) 
						(newim number h item.expr)];
					right 
						= [extract_area f 0 (w - f) h x], f < w
						= [];

					f = to_real first;
					w = get_width x;
					h = get_height x;
				}
			}
		}
	}
}

Matrix_delete_item = class
	Menupullright "_Delete" "delete rows or columns from a matrix" {
	// remove number of items, starting at first
	delete first number l = take (to_real first) l ++ 
		drop (to_real first + to_real number) l;

	Rows_item = class
		Menuaction "_Rows" "delete rows" {

		action x = class
			_result {
			_vislevel = 3;

			first = Expression "Delete from row" 0;
			number = Expression "Delete this many rows" 1;

			_result 
				= map_unary process x
			{
				process x
					= foldl1 (converse join_tb) (concat [top, bottom])
				{
					top 
						= [extract_area 0 0 w f x], f > 0
						= [];
					bottom 
						= [extract_area 0 b w (h - b) x], b < h
						= [];

					f = to_real first;
					n = to_real number;
					b = f + n;
					w = get_width x;
					h = get_height x;
				}
			}
		}
	}

	Columns_item = class
		Menuaction "_Columns" "delete columns" {
		action x = class
			_result {
			_vislevel = 3;

			first = Expression "Delete from column" 0;
			number = Expression "Delete this many columns" 1;

			_result 
				= map_unary process x
			{
				process x
					= foldl1 (converse join_lr) (concat [left, right])
				{
					left 
						= [extract_area 0 0 f h x], f > 0
						= [];
					right 
						= [extract_area r 0 (w - r) h x], r < w
						= [];

					f = to_real first;
					n = to_real number;
					r = f + n;
					w = get_width x;
					h = get_height x;
				}
			}
		}
	}
}

Matrix_join = class
	Menupullright "_Join" "join two matricies" {
	Left_right_item = class
		Menuaction "_Left to Right" "join two matricies left-right" {
		action a b = map_binary join_lr a b;
	}

	Top_bottom_item = class
		Menuaction "_Top to Bottom" "joiin two matricies top-bottom" {
		action a b = map_binary join_tb a b;
	}
}

Matrix_rotate_item = class
	Menupullright "_Rotate" "clockwise rotation by fixed angles" {

	rot90 = Image_transform_item.Rotate_item.Fixed_item.Rot90_item;

	rot180 = Image_transform_item.Rotate_item.Fixed_item.Rot180_item;

	rot270 = Image_transform_item.Rotate_item.Fixed_item.Rot270_item;

	Matrix_rot45_item = class
		Menuaction "_45 Degrees" 
			"45 degree rotate (square, odd-length-sides only)" {
		action x = map_unary rot45 x;
	}
}

Matrix_flip_item = Image_transform_item.Flip_item;

#separator

Matrix_invert_item = class
	Menuaction "In_vert" "calculate inverse matrix" {
	action x = map_unary (converse power (-1)) x;
}

Matrix_transpose_item = class
	Menuaction "_Transpose" "swap rows and columns" {
	action x = map_unary transpose x;
}

#separator

Matrix_plot_scatter_item = class 
	Menuaction "_Plot Scatter" 
		"plot a scatter graph of a matrix of [x,y1,y2,..] coordinates" {
	action x = class
		_result {
		_check_args = [
			[x, "x", check_Matrix]
		];
		_vislevel = 3;

		auto = Toggle "Auto Range" true;
		xmin = Expression "X range minimum" 0;
		xmax = Expression "X range maximum" 1;
		ymin = Expression "Y range minimum" 0;
		ymax = Expression "Y range maximum" 1;

		_result
			= Plot options ((x2b @ get_image @ to_image) x)
		{
			options
				= [["style", Plot_style.POINT], 
					["format", Plot_format.XYYY]] ++ range;
			range
				= [], auto
				= [["xmin", xmin.expr], ["xmax", xmax.expr], 
					["ymin", ymin.expr], ["ymax", ymax.expr]]; 

			// matrix to image makes a 1-band mxn image
			// we need to put columns into bands
			x2b im
				= bandjoin (map extract_col [0 .. w - 1])
			{
				w = get_width im;
				h = get_height im;
				b = get_bands im;
				extract_col x = extract_area x 0 1 h im;
			}
		}
	}
}

Matrix_plot_item = Hist_plot_item;

Matrix_buildlut_item = class 
	Menuaction "_Build LUT From Scatter" 
		"make a lookup table from a matrix of [x,y1,y2..] coordinates" {
	action x = class
		_result {
		_check_args = [
			[x, "x", check_Matrix]
		];
		_result = buildlut x;
	}
}