This file is indexed.

/usr/include/ncbi/vsm.h is in libvibrant6-dev 6.1.20120620-7.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
/*   vsm.h
* ===========================================================================
*
*                            PUBLIC DOMAIN NOTICE
*            National Center for Biotechnology Information (NCBI)
*
*  This software/database is a "United States Government Work" under the
*  terms of the United States Copyright Act.  It was written as part of
*  the author's official duties as a United States Government employee and
*  thus cannot be copyrighted.  This software/database is freely available
*  to the public for use. The National Library of Medicine and the U.S.
*  Government do not place any restriction on its use or reproduction.
*  We would, however, appreciate having the NCBI and the author cited in
*  any work or product based on this material
*
*  Although all reasonable efforts have been taken to ensure the accuracy
*  and reliability of the software and data, the NLM and the U.S.
*  Government do not and cannot warrant the performance or results that
*  may be obtained by using this software or data. The NLM and the U.S.
*  Government disclaim all warranties, express or implied, including
*  warranties of performance, merchantability or fitness for any particular
*  purpose.
*
* ===========================================================================
*
* File Name:  vsm.h
*
* Author:  Jim Ostell
*
* Version Creation Date:   11-29-94
*
* $Revision: 6.2 $
*
* File Description: 
*
* Modifications:  
* --------------------------------------------------------------------------
* Date     Name        Description of modification
* -------  ----------  -----------------------------------------------------
*
*
* ==========================================================================
*/

#ifndef _NCBI_VSM_
#define _NCBI_VSM_

#include <vibrant.h>
#include <vsmfile.h>


#ifdef __cplusplus
extern "C" {
#endif

/*****************************************************************************
*
*   Run VSeqMgr as the main program
*   	Initialize if not done already
*       title is the title of the main desktop window
*       aboutinfo is a string describing the application. Use ~ to separate
*       lines. Do not exceed 60 chars per line
*
*****************************************************************************/
void LIBCALL VSeqMgrRun PROTO((CharPtr title, CharPtr aboutinfo));

/*****************************************************************************
*
*   VSeqMgrInit(show)
*   	if (show) displays the window.
*   	OtherWise, just initializes.
*
*       WARNING: All datatypes and procs should be registered BEFORE calling
*           this function.
*
*****************************************************************************/
Boolean LIBCALL VSeqMgrInit PROTO((Boolean show));

/*****************************************************************************
*
*   VSeqMgrShow()
*   	display the VSeqMgr
*   	initializes if not already done
*
*****************************************************************************/
Boolean LIBCALL VSeqMgrShow PROTO((void));

/*****************************************************************************
*
*   VSeqMgrDelete()
*      removes the VSeqMgr from the screen
*      keeps settings for the main window
*
*****************************************************************************/
Boolean LIBCALL VSeqMgrDelete PROTO((void));

/*****************************************************************************
*
*   VSMAddToMenu(MenU m, Int2 menutype)
*      Adds a VSM style submenu to Menu
*      All included procs must have already been registered with the
*        objmgr.
*      types defined below function prototype
*
*****************************************************************************/
Boolean LIBCALL VSMAddToMenu PROTO((MenU m, Int2 menutype));

#define VSM_DESKTOP     0   /* adds whole NCBI desktop */
#define VSM_OPEN_MENU   1   /* adds cascading Open submenu */
#define VSM_SAVE_MENU   2   /* adds cascading Save As submenu */

/*****************************************************************************
*
*   VSMAddMenu(WindoW w, Int2 menutype)
*      Adds a VSM style menu to Window
*      All included procs must have already been registered with the
*        objmgr.
*      If no procs of this type are registered, does not add to window
*
*****************************************************************************/
Boolean LIBCALL VSMAddMenu PROTO((WindoW w, Int2 menutype));

#define VSM_FILTER_MENU 1   /* adds Filter menu */
#define VSM_ANALYZE_MENU 2   /* adds Analysis menu */
#define VSM_VIEW_MENU 3     /* viewers */
#define VSM_EDIT_MENU 4     /* editors */

NLM_EXTERN Boolean OkToListFeatDefInRemainingFeatures (Uint2 subtype);

#ifdef __cplusplus
}
#endif

#endif