/usr/include/ncbi/dotmatrx.h is in libvibrant6-dev 6.1.20120620-7.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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* *
* COPYRIGHT NOTICE *
* *
* This software/database is categorized as "United States Government *
* Work" under the terms of the United States Copyright Act. It was *
* produced as part of the author's official duties as a Government *
* employee and thus can not be copyrighted. This software/database is *
* freely available to the public for use without a copyright notice. *
* Restrictions can not be placed on its present or future use. *
* *
* Although all reasonable efforts have been taken to ensure the accuracy *
* and reliability of the software and data, the National Library of *
* Medicine (NLM) and the U.S. Government do not and can not warrant the *
* performance or results that may be obtained by using this software, *
* data, or derivative works thereof. The NLM and the U.S. Government *
* disclaim any and all warranties, expressed or implied, as to the *
* performance, merchantability or fitness for any particular purpose or *
* use. *
* *
* In any work or product derived from this material, proper attribution *
* of the author(s) as the source of the software or data would be *
* appreciated. *
* *
**************************************************************************/
/* $Revision 1.0$ *
* $Log: dotmatrx.h,v $
* Revision 6.2 1999/03/17 17:05:49 madden
* removed comment from within comment
*
* Revision 6.1 1998/01/26 17:23:42 madden
* Changes to allow color-coding of alignments
*
* Revision 6.0 1997/08/25 18:21:46 madden
* Revision changed to 6.0
*
* Revision 1.2 1997/01/06 19:26:42 madden
* Changed FnPtr to (LIBCALLBACK *callback... in DotMatrixSearch and CreateDotMatrixForm.
*
* Revision 1.1 1997/01/03 22:01:27 madden
* Initial revision
*
* Initial revision
*
*/
#include <vibrant.h>
#include <picture.h>
#include <viewer.h>
#include <objseq.h>
#include <objsset.h>
#ifndef __DOTMATRIX__
#define __DOTMATRIX__
#ifdef __cplusplus
extern "C" {
#endif
typedef struct dotmatrix_alignment {
struct dotmatrix_alignment PNTR next;
SeqAlignPtr sap;
Uint1Ptr color; /* Defined in picture.[ch] */
} DotMatrixAlignment, PNTR DotMatrixAlignmentPtr;
DotMatrixAlignmentPtr LIBCALL DotMatrixAlignmentNew (SeqAlignPtr sap, Uint1Ptr color, DotMatrixAlignmentPtr PNTR old);
Int2 LIBCALLBACK DotMatrixGenFunc (Pointer data);
ForM LIBCALL CreateDotMatrixForm PROTO((SeqAlignPtr sap, int (LIBCALLBACK *callback)PROTO((SeqAlignPtr seqalign))));
ForM LIBCALL CreateDotMatrixFormEx (DotMatrixAlignmentPtr dmap, int (LIBCALLBACK *callback)PROTO((SeqAlignPtr seqalign)));
Int2 LIBCALL DotMatrixSearch PROTO((SeqIdPtr sip1, SeqIdPtr sip2, int (LIBCALLBACK *callback)PROTO((SeqAlignPtr seqalign))));
#define REGISTER_SEQALIGN_DOT_MATRIX ObjMgrProcLoad (OMPROC_FILTER, \
"Dot Matrix", "DotMatrix", OBJ_SEQALIGN, 0, OBJ_SEQALIGN, 0, NULL, \
DotMatrixGenFunc, PROC_PRIORITY_DEFAULT)
#ifdef __cplusplus
}
#endif
#endif /* !__DOTMATRIX__ */
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