This file is indexed.

/usr/include/openturns/WrapperInterface.h is in libopenturns-dev 1.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
//                                               -*- C -*-
/**
 * @file  WrapperInterface.h
 * @brief This file provides an interface for external code C wrappers
 *
 * Copyright (C) 2005-2013 EDF
 *
 * Permission to copy, use, modify, sell and distribute this software
 * is granted provided this copyright notice appears in all copies.
 * This software is provided "as is" without express or implied
 * warranty, and with no claim as to its suitability for any purpose.
 *
 *
 * @author schueller
 * @date   2012-02-17 19:35:43 +0100 (Fri, 17 Feb 2012)
 */

#ifndef OPENTURNS_WRAPPERINTERFACE_H
#define OPENTURNS_WRAPPERINTERFACE_H

#include "OTdebug.h"
#include "OTconfig.hxx"

#ifdef HAVE_PTHREAD_H
#include "OTthread.hxx"
#include <signal.h>
#endif /* HAVE_PTHREAD_H */

BEGIN_C_DECLS

/**
 * Error codes and type that can be returned by the wrapper
 */
enum WrapperErrorCode {
  WRAPPER_OK = 0,
  WRAPPER_MEMORY_ERROR,
  WRAPPER_INITIALIZATION_ERROR,
  WRAPPER_EXECUTION_ERROR,
  WRAPPER_FINALIZATION_ERROR,
  WRAPPER_CANNOT_CREATE_STATE,
  WRAPPER_CANNOT_DELETE_STATE,
  WRAPPER_CANNOT_PROVIDE_INFORMATION,
  WRAPPER_INTERNAL_ERROR,
  WRAPPER_WRONG_ARGUMENT,
  WRAPPER_USAGE_ERROR,
  WRAPPER_NOT_IMPLEMENTED,
  WRAPPER_EXECUTION_ERROR_NO_RETRY,
  WRAPPER_BIND_ERROR,
  UNUSED_ERROR
};


/**
 * All those structures and definitions are designed for being exchanged
 * through the wrapper C API.
 */

/**
 * @struct WrapperInformation
 *
 * This structure is returned by the wrapper when the platform Open TURNS
 * asks it to detail its internal function.
 * There is one WrapperInformation structure for each internal function.
 */
struct WrapperInformation {
  unsigned long inSize_;  /* size of the in  numerical point of the function */
  unsigned long outSize_; /* size of the out numerical point of the function */
};

/**
 * @struct point
 *
 * This structure holds the numerical point that is consumed or produced
 * by the internal function.
 * Remember to allocate or free the data_ pointer. The memory management
 * policy is : When you allocate memory, you have to deallocate it !
 * So if you pass a point structure for which you have allocated memory
 * to a function, the function should not free the memory when called,
 * so you MUST free it when the function returns. OK ?
 */
struct point {
  unsigned long size_; /* size of data vector */
  double * data_; /* data of the numerical point ordered as a vector */
};

/**
 * @struct sample
 *
 * This structure holds the numerical sample that is consumed or produced
 * by the internal function.
 * Remember to allocate or free the data_ pointer. The memory management
 * policy is : When you allocate memory, you have to deallocate it !
 * So if you pass a sample structure for which you have allocated memory
 * to a function, the function should not free the memory when called,
 * so you MUST free it when the function returns. OK ?
 */
struct sample {
  unsigned long size_;      /* size of data sample */
  unsigned long dimension_; /* dimension of data sample */
  double * data_;           /* data of the numerical sample ordered as a vector */
};


/**
 * @struct timeseries
 *
 * This structure holds the timeseries that is consumed or produced
 * by the internal function.
 * Remember to allocate or free the data_ pointer. The memory management
 * policy is : When you allocate memory, you have to deallocate it !
 * So if you pass a sample structure for which you have allocated memory
 * to a function, the function should not free the memory when called,
 * so you MUST free it when the function returns. OK ?
 */
struct timeseries {
  unsigned long size_;      /* size of data sample */
  unsigned long dimension_; /* dimension of data sample. Important note: see TimeSeries.hxx */
  double * data_;           /* data of the timeseries ordered as a vector */
};


/**
 * @struct matrix
 *
 * This structure holds the matrix that produced
 * by the internal gradient.
 * Remember to allocate or free the data_ pointer. The memory management
 * policy is : When you allocate memory, you have to deallocate it !
 * So if you pass a matrix structure for which you have allocated memory
 * to a function, the function should not free the memory when called,
 * so you MUST free it when the function returns. OK ?
 */
struct matrix {
  unsigned long nbrows_; /* number of rows into data vector */
  unsigned long nbcols_; /* number of columns into data vector */
  double * data_; /* data of the matrix ordered as a vector */
};


/**
 * @struct tensor
 *
 * This structure holds the tensor that produced
 * by the internal hessian.
 * Remember to allocate or free the data_ pointer. The memory management
 * policy is : When you allocate memory, you have to deallocate it !
 * So if you pass a tensor structure for which you have allocated memory
 * to a function, the function should not free the memory when called,
 * so you MUST free it when the function returns. OK ?
 */
struct tensor {
  unsigned long nbrows_; /* number of rows into data vector */
  unsigned long nbcols_; /* number of columns into data vector */
  unsigned long nbsheets_; /* number of sheets into data vector */
  double * data_; /* data of the tensor ordered as a vector */
};


/**
 * @enum WrapperListElementType
 *
 * This simple enumeration holds the type (input or output) of elements
 * used by the wrapper.
 */
enum WrapperListElementType { WRAPPER_IN=0, WRAPPER_OUT, WRAPPER_INTERNAL, UNUSED_LISTELEMENT };
enum WrapperProvided        { WRAPPER_NO=0, WRAPPER_YES, UNUSED_PROVIDED };
enum WrapperLocationType    { WRAPPER_LINE=0, WRAPPER_REGEXP, UNUSED_LOCATION };


/**
 * @ struct WrapperFileListElement
 *
 * This structure is a shell for all information about files
 * used by the wrapper.
 */
struct WrapperFileListElement {
  char * id_; /* The id of the file (for human reading) */
  char * name_; /* The name of the file (for human reading) */
  char * path_; /* The path of the file */
  char * subst_; /* The substitution list of the file */
  enum WrapperListElementType type_; /* The type (input or output) of the file */
};

/**
 * @struct WrapperFileList
 *
 * This is the link of a chained list. This list holds all the files
 * exchanged with the wrapper.
 */
struct WrapperFileList {
  struct WrapperFileList * next_; /* Points to the next element in list */
  struct WrapperFileListElement * file_; /* The file passed to the wrapper */
};




/**
 * @struct WrapperVariableListElement
 *
 * This structure is a shell for all information about variables
 * used by the wrapper.
 */
struct WrapperVariableListElement {
  char * id_;              /* The identifier of the variable */
  char * comment_;         /* The comment informs on the variable (for human reading) */
  char * unit_;            /* The unit which the variable is expressed in */
  char * regexp_;          /* The regular expression used to find the variable location in files */
  char * format_;          /* The format in which the variable must be printed in files */
  enum WrapperListElementType type_;     /* The type (input or output) of the variable */
  enum WrapperProvided gradient_; /* The gradient of this variable is computed if non-zero */
  enum WrapperLocationType fromType_; /* The type of information stored in from_ member */
  char * from_;            /* The location in file where substitution should start */
  enum WrapperLocationType toType_;   /* The type of information stored in to_ member */
  char * to_;              /* The location in file where substitution should stop */
};

/**
 * @struct WrapperVariableList
 *
 * This is the link of a chained list. This list holds all the variables
 * exchanged with the wrapper.
 */
struct WrapperVariableList {
  struct WrapperVariableList * next_; /* Points to the next element in list */
  struct WrapperVariableListElement * variable_; /* The variable passed to the wrapper */
};


enum WrapperConfigurationState { WRAPPER_SHAREDSTATE=0, WRAPPER_SPECIFICSTATE, UNUSED_CONFIGURATIONSTATE };
enum WrapperConfigurationMode  { WRAPPER_STATICLINK=0, WRAPPER_DYNAMICLINK, WRAPPER_FORK, UNUSED_CONFIGURATIONMODE };
enum WrapperDataTransferMode   { WRAPPER_FILES=0, WRAPPER_PIPE, WRAPPER_ARGUMENTS, WRAPPER_SOCKET, WRAPPER_CORBA, UNUSED_DATATRANSFERMODE };

/**
 * @struct WrapperConfiguration
 *
 * This structure contains general information about the wrapper
 */
struct WrapperConfiguration {
  enum WrapperConfigurationState state_; /* The mode of sharing of the internal state */
  enum WrapperConfigurationMode mode_;  /* The wrapping mode */
  enum WrapperDataTransferMode in_;    /* The input transfer mode */
  enum WrapperDataTransferMode out_;   /* The output transfer mode */
  char * command_;      /* The command invoqued by the wrapper to run the external code */
  char * userPrefix_;   /* The prefix that helps the user to find its compute dir  */
};


/**
 * @struct PlatformConfiguration
 *
 * This structure contains some information about the platform configuration
 * at the time the wrapper is loaded.
 */
struct PlatformConfiguration {
  char * generalTemporaryDirectory_; /* The main temporary directory in which wrappers can work */
  char * realRegexpShortcut_;        /* The shortcut for regular expression that match reals    */
  char * integerRegexpShortcut_;     /* The shortcut for regular expression that match integers */
  char * separatorRegexpShortcut_;   /* The shortcut for regular expression that match blanks   */
  unsigned long nbCpus_;             /* The number of virtual CPUs on the system                */
  unsigned long outputFilesTimeout_; /* The timeout when waiting for output files to be read    */
  long retries_;                     /* The number of retries for a failed command              */
  char * command_path_;              /* The path to the script file to run with multithreading  */
};


/**
 * @struct FrameworkData
 *
 * This structure contains some information needed by an possible englobing framework (like Salome).
 */
struct FrameworkData {
  long studyid_; /* The id of the study */
  char * studycase_; /* The entry of the case in the study designated by its id */
  char * componentname_; /* The name of the solver component */
};


/**
 * @struct WrapperExchangedData
 *
 * This is the main structure that holds all the informations
 * that can be exchanged with the wrapper.
 */
struct WrapperExchangedData {
  struct WrapperFileList       * fileList_;     /* A chained list of files for the wrapper */
  struct WrapperVariableList   * variableList_; /* A chained list of variables for the wrapper */
  struct WrapperConfiguration  * parameters_;   /* The configuration of the wrapper */
  struct PlatformConfiguration * platform_;     /* The configuration of the platform */
  struct FrameworkData         * framework_;    /* The data needed by an englobing framework */
  pthread_mutex_t              * p_lock_;       /* The mutex that locks this structure */
};



/**
 * This is the wrapper C API.
 * Every wrapper that intends to plug into the Open TURNS platform should
 * provide those functions. They may do nothing if the wrapper does not
 * need it.
 *
 * Anyway, always remember that THE WRAPPER IS TO BE CALLED CONCURRENTLY
 * by the platform, so be careful with data sharing and global variable.
 * If not protected with critical sections, it is almost sure that something
 * will break one day or another.
 *
 * Because there is no internal synchronisation mechanism in C, it is UP TO YOU
 * to do the work.
 *
 * So keep cool. Do simple things. And if things come to be tough, have a break !
 * If at last, you always stands with global or static variables, shared data or
 * things leaving outside of your functions, then you have to enter the wonderful
 * but terrible world or parallelism. Do you have a talisman ?
 */


/**
 * StateCreationFunctionPointer : a function that creates a reserved memory space
 * StateDeletionFunctionPointer : a function that frees the reserved memory space
 * GetWrapperInformationFunctionPointer : a function that gives information about
 *   the wrapper internal function
 * InitializationFunctionPointer : a function that prepare the wrapper before the
 *   first call of the wrapper internal function
 * ExecutionFunctionPointer : a function that calls the internal wrapper function
 *   which is the purpose of the wrapper
 * GradientFunctionPointer : a function that calls the internal wrapper gradient
 *   which is the purpose of the wrapper
 * HessianFunctionPointer : a function that calls the internal wrapper hessian
 *   which is the purpose of the wrapper
 * FinalizationFunctionPointer : a function that clean everything up after the last
 *   call of the wrapper internal function
 */
typedef enum  WrapperErrorCode               RETURNCODE;
typedef       void                       (*  METHODS)();
typedef       void                        *  STATE;
typedef       void                        ** NEW_STATE;
typedef       void                        *  ERROR;
typedef const struct WrapperExchangedData *  EXCHANGEDDATA;
typedef       struct WrapperInformation   *  INFORMATION;
typedef const struct point                *  INPOINT;
typedef const struct sample               *  INSAMPLE;
typedef const struct timeseries           *  INTIMESERIES;
typedef       struct point                *  OUTPOINT;
typedef       struct sample               *  OUTSAMPLE;
typedef       struct timeseries           *  OUTTIMESERIES;
typedef       struct matrix               *  OUTMATRIX;
typedef       struct tensor               *  OUTTENSOR;


typedef RETURNCODE ( * BindMethodsFunctionPointer           )( METHODS[]                                                    );
typedef RETURNCODE ( * StateCreationFunctionPointer         )( NEW_STATE,                              EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * StateDeletionFunctionPointer         )(     STATE,                              EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * GetWrapperInformationFunctionPointer )(     STATE, INFORMATION,                 EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * InitializationFunctionPointer        )(     STATE,                              EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * ExecutionFunctionPointer             )(     STATE, INPOINT,      OUTPOINT,      EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * ExecutionSampleFunctionPointer       )(     STATE, INSAMPLE,     OUTSAMPLE,     EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * ExecutionTimeSeriesFunctionPointer   )(     STATE, INTIMESERIES, OUTTIMESERIES, EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * GradientFunctionPointer              )(     STATE, INPOINT,      OUTMATRIX,     EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * HessianFunctionPointer               )(     STATE, INPOINT,      OUTTENSOR,     EXCHANGEDDATA, ERROR );
typedef RETURNCODE ( * FinalizationFunctionPointer          )(     STATE,                              EXCHANGEDDATA, ERROR );

END_C_DECLS

/* For compatibility with old wrappers */
#include "WrapperInterface_V0.h"

#endif /* OPENTURNS_WRAPPERINTERFACE_H */