/usr/include/openturns/Rfunctions.hxx is in libopenturns-dev 1.2-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 | // -*- C++ -*-
/**
* @file Rfunctions.hxx
* @brief Graph implements graphic devices for plotting through R
*
* Copyright (C) 2005-2013 EDF-EADS-Phimeca
*
* This library is free software: you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This library is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* along with this library. If not, see <http://www.gnu.org/licenses/>.
*
* @author schueller
* @date 2012-07-16 10:12:54 +0200 (Mon, 16 Jul 2012)
*/
#ifndef OPENTURNS_RFUNCTIONS_HXX
#define OPENTURNS_RFUNCTIONS_HXX
#include "OTprivate.hxx"
BEGIN_NAMESPACE_OPENTURNS
static const String R_LEGEND = "legend <-function(x, y = NULL, legend, fill=NULL, col = par(\"col\"), lty, lwd, pch, angle = 45, density = NULL, bty = \"o\", bg = par(\"bg\"), pt.bg = NA, cex = 2, pt.cex = cex, pt.lwd = lwd, xjust = 0, yjust = 1, x.intersp = 1, y.intersp = 1, adj = c(0, 0.5), text.width = NULL, text.col = par(\"col\"), merge = do.lines && has.pch, trace = FALSE, plot = TRUE, ncol = 1, horiz = FALSE, title = NULL, inset = 0) \n { \n if(missing(legend) && !missing(y) && (is.character(y) || is.expression(y))) \n { \n legend <- y \n y <- NULL \n } \n mfill <- !missing(fill) || !missing(density) \n \n if(length(title) > 1) stop(\"invalid title\") \n n.leg <- if(is.call(legend)) 1 else length(legend) \n if(n.leg == 0) stop(\"legend is of length 0\") \n auto <- \n if (is.character(x)) \n match.arg(x, c(\"bottomright\", \"bottom\", \"bottomleft\", \"left\", \"topleft\", \"top\", \"topright\", \"right\", \"center\")) \n else NA \n if (is.na(auto)) \n { \n xy <- xy.coords(x, y); x <- xy$x; y <- xy$y \n nx <- length(x) \n if (nx < 1 || nx > 2) stop(\"invalid coordinate lengths\") \n } \n else nx <- 0 \n \n xlog <- par(\"xlog\") \n ylog <- par(\"ylog\") \n \n rect2 <- function(left, top, dx, dy, density = NULL, angle, ...) \n { \n r <- left + dx; if(xlog) { left <- 10^left; r <- 10^r } \n b <- top - dy; if(ylog) { top <- 10^top; b <- 10^b } \n rect(left, top, r, b, angle = angle, density = density, ...) \n } \n \n segments2 <- function(x1, y1, dx, dy, ...) \n { \n x2 <- x1 + dx; if(xlog) { x1 <- 10^x1; x2 <- 10^x2 } \n y2 <- y1 + dy; if(ylog) { y1 <- 10^y1; y2 <- 10^y2 } \n segments(x1, y1, x2, y2, ...) \n } \n \n points2 <- function(x, y, ...) \n { \n if(xlog) x <- 10^x \n if(ylog) y <- 10^y \n points(x, y, ...) \n } \n \n text2 <- function(x, y, ...) \n { \n if(xlog) x <- 10^x \n if(ylog) y <- 10^y \n text(x, y, ...) \n } \n if(trace) \n \n catn <- function(...) \n { \n do.call(\"cat\", c(lapply(list(...),formatC), list(\"\"))) \n } \n \n cin <- par(\"cin\") \n Cex <- cex * par(\"cex\") \n \n if(is.null(text.width)) \n text.width <- max(strwidth(legend, units=\"user\", cex=cex)) \n else if(!is.numeric(text.width) || text.width < 0) \n stop(\"text.width must be numeric, >= 0\") \n \n xc <- Cex * xinch(cin[1], warn.log=FALSE) \n yc <- Cex * yinch(cin[2], warn.log=FALSE) \n \n xchar <- xc \n xextra <- 0 \n yextra <- yc * (y.intersp - 1) \n ymax <- max(yc, strheight(legend, units=\"user\", cex=cex)) \n ychar <- yextra + ymax \n if(trace) catn(\" xchar=\", xchar, \"; (yextra,ychar)=\", c(yextra,ychar)) \n \n if(mfill) \n { \n xbox <- xc * 0.8 \n ybox <- yc * 0.5 \n dx.fill <- xbox \n } \n do.lines <- (!missing(lty) && (is.character(lty) || any(lty > 0))) || !missing(lwd) \n if(is.na(do.lines)) do.lines <- FALSE \n \n n.legpercol <- \n if(horiz) \n { \n if(ncol != 1) warning(\"horizontal specification overrides: Number of columns := \", n.leg) \n ncol <- n.leg \n 1 \n } else ceiling(n.leg / ncol) \n \n if(has.pch <- !missing(pch) && length(pch) > 0) \n { \n if(is.character(pch) && !is.na(pch[1]) && nchar(pch[1], type=\"c\") > 1) \n { \n if(length(pch) > 1) warning(\"not using pch[2..] since pch[1] has multiple chars\") \n np <- nchar(pch[1], type=\"c\") \n pch <- substr(rep.int(pch[1], np), 1:np, 1:np) \n } \n if(!merge) dx.pch <- x.intersp/2 * xchar \n } \n x.off <- if(merge) -0.7 else 0 \n \n if (is.na(auto)) \n { \n if (xlog) x <- log10(x) \n if (ylog) y <- log10(y) \n } \n if(nx == 2) \n { \n x <- sort(x) \n y <- sort(y) \n left <- x[1] \n top <- y[2] \n w <- diff(x) \n h <- diff(y) \n w0 <- w/ncol \n \n x <- mean(x) \n y <- mean(y) \n if(missing(xjust)) xjust <- 0.5 \n if(missing(yjust)) yjust <- 0.5 \n } \n else \n { \n h <- (n.legpercol + !is.null(title)) * ychar + yc \n w0 <- text.width + (x.intersp + 1) * xchar \n if(mfill) w0 <- w0 + dx.fill \n if(has.pch && !merge) w0 <- w0 + dx.pch \n if(do.lines) w0 <- w0 + (2+x.off) * xchar \n w <- ncol*w0 + .5* xchar \n if (!is.null(title) && (tw <- strwidth(title, units=\"user\", cex=cex) + 0.5*xchar) > w) \n { \n xextra <- (tw - w)/2 \n w <- tw \n } \n \n if (is.na(auto)) \n { \n left <- x - xjust * w \n top <- y + (1 - yjust) * h \n } \n else \n { \n usr <- par(\"usr\") \n inset <- rep(inset, length.out = 2) \n insetx <- inset[1]*(usr[2] - usr[1]) \n left <- switch(auto, \"bottomright\"=, \"topright\"=, \"right\" = usr[2] - w - insetx, \"bottomleft\"=, \"left\"=, \"topleft\"= usr[1] + insetx, \"bottom\"=, \"top\"=, \"center\"= (usr[1] + usr[2] - w)/2) \n insety <- inset[2]*(usr[4] - usr[3]) \n top <- switch(auto, \"bottomright\"=, \"bottom\"=, \"bottomleft\"= usr[3] + h + insety, \"topleft\"=, \"top\"=, \"topright\" = usr[4] - insety, \"left\"=, \"right\"=, \"center\" = (usr[3] + usr[4] + h)/2) \n } \n } \n \n if (plot && bty != \"n\") \n { \n if(trace) catn(\" rect2(\",left,\",\",top,\", w=\",w,\", h=\",h,\", ...)\",sep=\"\") \n rect2(left, top, dx = w, dy = h, col = bg, density = NULL) \n } \n \n xt <- left + xchar + xextra + (w0 * rep.int(0:(ncol-1), rep.int(n.legpercol,ncol)))[1:n.leg] \n yt <- top - 0.5 * yextra - ymax - (rep.int(1:n.legpercol,ncol)[1:n.leg] - 1 + !is.null(title)) * ychar \n \n if(plot && (has.pch || do.lines || mfill)) col <- rep(col, length.out = n.leg) \n \n if (mfill) \n { \n if(plot) \n { \n fill <- rep(fill, length.out = n.leg) \n for (boxcount in 1:length(xt)) \n { \n if (!is.na(fill[boxcount])) \n { \n dens <- NA \n if(fill[boxcount] == \"solid\") dens <- NA \n if(fill[boxcount] == \"shaded\") dens <- density \n rect2(.9*xbox + xt[boxcount], yt[boxcount] + 1.2*ybox/2, dx = xbox, dy = 1.2*ybox/2, col = col[boxcount],density=dens,angle=angle,border=col[boxcount]) \n } \n } \n } \n xt <- xt + dx.fill \n } \n seg.len <- 2 \n if(missing(lwd)) lwd <- par(\"lwd\") \n if (do.lines) \n { \n if(missing(lty)) lty <- 1 \n lty <- rep(lty, length.out = n.leg) \n lwd <- rep(lwd, length.out = n.leg) \n ok.l <- !is.na(lty) & (is.character(lty) | lty > 0) \n if(trace) catn(\" segments2(\",xt[ok.l] + x.off*xchar, \",\", yt[ok.l], \", dx=\", seg.len*xchar, \", dy=0, ...)\") \n if(plot) segments2(xt[ok.l] + x.off*xchar, yt[ok.l], dx= seg.len*xchar, dy=0, lty = lty[ok.l], lwd = lwd[ok.l], col = col[ok.l]) \n xt <- xt + (seg.len+x.off) * xchar \n } \n if (has.pch) \n { \n pch <- rep(pch, length.out = n.leg) \n pt.bg <- rep(pt.bg, length.out = n.leg) \n pt.cex<- rep(pt.cex, length.out = n.leg) \n pt.lwd<- rep(pt.lwd, length.out = n.leg) \n ok <- !is.na(pch) & (is.character(pch) | pch >= 0) \n x1 <- (if(merge) xt-(seg.len/2)*xchar else xt)[ok] \n y1 <- yt[ok] \n if(trace) catn(\" points2(\", x1,\",\", y1,\", pch=\", pch[ok],\", ...)\") \n if(plot) points2(x1, y1, pch = pch[ok], col = col[ok], cex = pt.cex[ok], bg = pt.bg[ok], lwd = pt.lwd[ok]) \n if (!merge) xt <- xt + dx.pch \n } \n \n xt <- xt + x.intersp * xchar \n if(plot) \n { \n if (!is.null(title)) text2(left + w/2, top - ymax, labels = title, adj = c(0.5, 0), cex = cex, col = text.col) \n text2(xt, yt, labels = legend, adj = adj, cex = cex, col = text.col) \n } \n invisible(list(rect = list(w = w, h = h, left = left, top = top), text = list(x = xt, y = yt))) \n }";
static const String R_PIE = "pie <- function (x,center=c(0,0), labels = names(x), edges = 200, radius = 0.8, clockwise = FALSE, init.angle = if (clockwise) 90 else 0, density = NULL, angle = 45, col = NULL, border = NULL, lty = NULL, main = NULL, ...) \n { \n if (!is.numeric(x) || any(is.na(x) | x < 0)) stop(\"'x' values must be positive.\") \n if (is.null(labels)) labels <- as.character(1:length(x)) \n x <- c(0, cumsum(x)/sum(x)) \n dx <- diff(x) \n nx <- length(dx) \n \n pin <- par(\"pin\") \n usr <- par(\"usr\") \n \n rhoy <- (usr[4]-usr[3])/(usr[2]-usr[1])*pin[1]/pin[2] \n rhox <- 1 \n if(rhoy>1) \n { \n rhox <- 1/rhoy \n rhoy <- 1 \n } \n \n if (is.null(col)) \n col <- if (is.null(density)) c(\"white\", \"lightblue\", \"mistyrose\", \"lightcyan\", \"lavender\", \"cornsilk\") \n else par(\"fg\") \n col <- rep(col, length.out = nx) \n border <- rep(border, length.out = nx) \n lty <- rep(lty, length.out = nx) \n angle <- rep(angle, length.out = nx) \n density <- rep(density, length.out = nx) \n twopi <- if (clockwise) -2 * pi else 2 * pi\n t2xy <- function(t) \n { \n t2p <- twopi * t + init.angle * pi/180 \n list(x = radius * cos(t2p), y = radius * sin(t2p)) \n } \n \n for (i in 1:nx) \n { \n n <- max(2, floor(edges * dx[i])) \n P <- t2xy(seq(x[i], x[i + 1], length = n)) \n P$y <- P$y*rhoy \n P$x <- P$x*rhox \n polygon(c(P$x, 0)+center[1], c(P$y, 0)+center[2], density = density[i], angle = angle[i],border = border[i], col = col[i], lty = lty[i]) \n P <- t2xy(mean(x[i + 0:1])) \n P$y <- P$y*rhoy \n P$x <- P$x*rhox \n if (!is.na(lab <- labels[i]) && lab != \"\") \n { \n lines(c(1,1.05)*P$x+center[1], c(1,1.05)*P$y+center[2]) \n text(1.1 * P$x + center[1], 1.1 * P$y + center[2], lab, cex=2, xpd = TRUE, adj = ifelse(P$x <0, 1, 0), ...) \n } \n } \n invisible(NULL) \n }";
END_NAMESPACE_OPENTURNS
#endif /* OPENTURNS_RFUNCTIONS_HXX */
|