/usr/include/ncbi/connect/ncbi_heapmgr.h is in libncbi6-dev 6.1.20120620-7.
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#define CONNECT___NCBI_HEAPMGR__H
/* $Id: ncbi_heapmgr.h,v 6.28 2012/04/19 16:09:32 kazimird Exp $
* ===========================================================================
*
* PUBLIC DOMAIN NOTICE
* National Center for Biotechnology Information
*
* This software/database is a "United States Government Work" under the
* terms of the United States Copyright Act. It was written as part of
* the author's official duties as a United States Government employee and
* thus cannot be copyrighted. This software/database is freely available
* to the public for use. The National Library of Medicine and the U.S.
* Government have not placed any restriction on its use or reproduction.
*
* Although all reasonable efforts have been taken to ensure the accuracy
* and reliability of the software and data, the NLM and the U.S.
* Government do not and cannot warrant the performance or results that
* may be obtained by using this software or data. The NLM and the U.S.
* Government disclaim all warranties, express or implied, including
* warranties of performance, merchantability or fitness for any particular
* purpose.
*
* Please cite the author in any work or product based on this material.
*
* ===========================================================================
*
* Authors: Anton Lavrentiev, Denis Vakatov
*
* File Description:
* Simple heap manager with a primitive garbage collection
*
*/
#include <connect/ncbi_types.h>
/** @addtogroup ServiceSupport
*
* @{
*/
#ifdef __cplusplus
extern "C" {
#endif
/* Heap handle
*/
struct SHEAP_tag;
typedef struct SHEAP_tag* HEAP;
/* Header of a heap block
*/
typedef struct {
unsigned int flag; /* (short)flag == 0 if block is vacant */
TNCBI_Size size; /* size of the block (including the block header) */
} SHEAP_Block;
/* Callback to resize the heap (a la 'realloc').
* NOTE: the returned address must be aligned with the 'double' boundary!
*
* old_base | new_size | Expected result
* ------------+------------+--------------------------------------------------
* non-NULL | 0 | Deallocate old_base and return 0
* non-NULL | non-zero | Reallocate to the requested size, return new base
* 0 | non-zero | Allocate (anew) and return base
* 0 | 0 | Do nothing, return 0
* ------------+------------+--------------------------------------------------
* Note that reallocation can request either to expand or to shrink the
* heap extent. When (re-)allocation fails, the callback should return 0
* (and must not change the original heap extent / content, if any).
* When expected to return 0, this callback must always do so.
*/
typedef void* (*FHEAP_Resize)
(void* old_base, /* current base of the heap to be expanded */
TNCBI_Size new_size, /* requested new heap size (zero to deallocate heap) */
void* auxarg /* user-supplied argument, see HEAP_Create() below */
);
/* Create new heap.
* NOTE: the initial heap base must be aligned at a 'double' boundary!
*/
extern NCBI_XCONNECT_EXPORT HEAP HEAP_Create
(void* base, /* initial heap base (use "resize" if NULL) */
TNCBI_Size size, /* initial heap size */
TNCBI_Size chunk_size, /* minimal increment size */
FHEAP_Resize resize, /* NULL if not resizeable */
void* auxarg /* a user argument to pass to "resize" */
);
/* Attach to an already existing heap (in read-only mode).
*/
extern NCBI_XCONNECT_EXPORT HEAP HEAP_Attach
(const void* base, /* base of the heap to attach to */
int serial /* serial number to assign */
);
/* Expedited HEAP_Attach() that does not calculate heap size on its own */
extern NCBI_XCONNECT_EXPORT HEAP HEAP_AttachFast
(const void* base, /* base of the heap to attach to */
TNCBI_Size size, /* heap extent -- must be non-0 for non-NULL base */
int serial /* serial number to assign */
);
/* Allocate a new block of memory in the heap.
*/
extern NCBI_XCONNECT_EXPORT SHEAP_Block* HEAP_Alloc
(HEAP heap, /* heap handle */
TNCBI_Size size /* data size of the block to accomodate */
);
/* Allocate a new block of memory in the heap
* (faster than HEAP_Alloc() but inverses the insertion order).
*/
extern NCBI_XCONNECT_EXPORT SHEAP_Block* HEAP_AllocFast
(HEAP heap, /* heap handle */
TNCBI_Size size /* data size of the block to accomodate */
);
/* Deallocate a block pointed to by "ptr".
*/
extern NCBI_XCONNECT_EXPORT void HEAP_Free
(HEAP heap, /* heap handle */
SHEAP_Block* ptr /* block to deallocate */
);
/* Deallocate a block pointed to by "ptr" and having "prev" as its predecessor
* (NULL if "ptr" is the first on the heap) -- a faster variant of HEAP_Free().
* NOTE: Since the block pointed to by "ptr" may cause free blocks to
* coalesce, to use this call again while walking the following rule must
* be utilized: If "prev" was free, "prev" must not get advanced;
* otherwise, "prev" must be updated with "ptr"'s value.
*/
extern NCBI_XCONNECT_EXPORT void HEAP_FreeFast
(HEAP heap, /* heap handle */
SHEAP_Block* ptr, /* block to deallocate */
const SHEAP_Block* prev /* block's predecessor */
);
/* Iterate through the heap blocks.
* Return pointer to the block following block "prev_block".
* Return NULL if "prev_block" is the last block of the heap.
*/
extern NCBI_XCONNECT_EXPORT SHEAP_Block* HEAP_Walk
(const HEAP heap, /* heap handle */
const SHEAP_Block* prev /* (if 0, then get the first block of the heap) */
);
/* Trim the heap, making garbage collection first. Returned is
* the resultant heap, which has its last block (if any) trimmed to the
* size of the heap chunk size as specified at the time of the heap creation.
* No change in size is made if the last block is not free or large
* enough to allow the trimming. NULL gets returned on NULL or read-only
* heaps, or if a resize error has occurred.
* Note that trimming can cause the entire heap extent (of an empty heap)
* to deallocate (so that HEAP_Base() and HEAP_Size() will return 0).
*/
extern NCBI_XCONNECT_EXPORT HEAP HEAP_Trim(HEAP heap);
/* Make a snapshot of a given heap. Return a read-only heap
* (like the one after HEAP_Attach[Fast]), which must be freed by a call
* to either HEAP_Detach() or HEAP_Destroy() when no longer needed.
* A copy is created reference-counted (with the initial ref.count set to 1).
*/
extern NCBI_XCONNECT_EXPORT HEAP HEAP_Copy
(const HEAP orig, /* original heap to copy from */
size_t extra, /* extra amount to add past the heap extent */
int serial /* serial number to assign */
);
/* Add reference counter to the given copy heap (no effect on
* a heap, which have been HEAP_Create()'d or HEAP_Attach[Fast]()'d).
* The heap handle then will be destroyed only when the internal
* reference counter reaches 0. No internal locking is provided.
* Return the resultant value of the reference counter.
*/
extern NCBI_XCONNECT_EXPORT unsigned int HEAP_AddRef(HEAP heap);
/* Detach heap (previously attached by HEAP_Attach[Fast]).
* For copy heap, it decrements an internal ref. counter by one, and
* destroys the heap handle if and only if the counter has reached 0.
* No internal locking of the reference counter is provided.
* For heaps that are results of the HEAP_Copy() call,
* both HEAP_Detach() and HEAP_Destroy() can be used interchangeably.
* Return the remaining value of the reference counter (0 if the heap is gone).
*/
extern NCBI_XCONNECT_EXPORT unsigned int HEAP_Detach(HEAP heap);
/* Destroy heap (previously created by HEAP_Create()).
* For copy heaps -- see comments for HEAP_Detach() above.
* Return the remaining value of the reference counter (0 if the heap is gone).
*/
extern NCBI_XCONNECT_EXPORT unsigned int HEAP_Destroy(HEAP heap);
/* Get base address of the heap.
* Return NULL if heap is passed as NULL, or when the heap is completely empty.
*/
extern NCBI_XCONNECT_EXPORT void* HEAP_Base(const HEAP heap);
/* Get the extent of the heap.
* Return 0 if heap is passed as NULL, or when the heap is completely empty.
*/
extern NCBI_XCONNECT_EXPORT TNCBI_Size HEAP_Size(const HEAP heap);
/* Get a serial number of the heap as assigned by Attach or Copy.
* Return 0 if the heap is not a copy but the original, or passed as NULL.
*/
extern NCBI_XCONNECT_EXPORT int HEAP_Serial(const HEAP heap);
/* Set heap access speed (and ignore second parameter):
* fast == eOn turns on fast heap operations (default);
* fast == eOff turns off fast heap operations (more checks, slower);
* fast == eDefault does not change the current setting.
* This call is intended for internal uses; and default settings (fast ops
* w/o structure integrity checks) should suffice for most users.
*/
extern NCBI_XCONNECT_EXPORT void HEAP_Options(ESwitch fast, ESwitch unused);
#ifdef __cplusplus
} /* extern "C" */
#endif
/* @} */
#endif /* CONNECT___NCBI_HEAPMGR__H */
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