This file is indexed.

/usr/include/linbox/solutions/smith-form.h is in liblinbox-dev 1.3.2-1.1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
/* Copyright (C) 2010 LinBox
 *
 *
 *
 *
 * ========LICENCE========
 * This file is part of the library LinBox.
 *
  * LinBox is free software: you can redistribute it and/or modify
 * it under the terms of the  GNU Lesser General Public
 * License as published by the Free Software Foundation; either
 * version 2.1 of the License, or (at your option) any later version.
 *
 * This library is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.	 See the GNU
 * Lesser General Public License for more details.
 *
 * You should have received a copy of the GNU Lesser General Public
 * License along with this library; if not, write to the Free Software
 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA
 * ========LICENCE========
 */

#ifndef __LINBOX_smith_form_H
#define __LINBOX_smith_form_H

#include <list>
#include <vector>
#include "linbox/util/error.h"
#include "linbox/algorithms/matrix-hom.h"
#ifdef __LINBOX_HAVE_NTL
#include "linbox/algorithms/smith-form-adaptive.h"
#endif
#include "linbox/field/PID-integer.h"
//#include "linbox/algorithms/smith-form.h"
//#include "linbox/algorithms/smith-form-local.h"

namespace LinBox
{
	template<class I1, class Lp>
	void distinct (I1 a, I1 b, Lp& c)
	{	typename I1::value_type e;
		size_t count = 0;
		if (a != b) {e = *a; ++a; count = 1;}
		else return;
		while (a != b)
		{	if (*a == e)
			++count;
			else
			{	c.push_back(typename Lp::value_type(e, count));
				e = *a; count = 1;
			}
			++a;
		}
		c.push_back(typename Lp::value_type(e, count));
		return;
	}


	/** Compute the Smith form of A.
	 * \ingroup solutions
	 *
	 * The Smith form of a linear operator A, represented as a
	 * black box, is computed over a representation of \f$Z\f$ or \f$Z_m\f$.
	 *
	 * @param[out] S a list of invariant/repcount pairs.
	 * @param A Matrix of which to compute the Smith form
	 * @param M may be a \p Method::Hybrid (default), which uses the
	 algorithms/smith-form-adaptive.
	 @todo Other methods will be provided later.
	 For now see the examples/smith.C
	 for ways to call other smith form algorithms.
	 */
	template <class Output, class Blackbox, class MyMethod>
	Output &smithForm(Output & S,
			  const Blackbox                              &A,
			  const MyMethod                           &M)
	{
		smithForm(S, A, typename FieldTraits<typename Blackbox::Field>::categoryTag(), M);
		return S;
	}

	// for specialization with respect to the DomainCategory
	template< class Output, class Blackbox, class SmithMethod, class DomainCategory>
	Output &smithForm(Output & S,
			  const Blackbox        &A,
			  const DomainCategory  &tag,
			  const SmithMethod  &M)
	{
		throw LinBoxError( "Smith form solution implemented only for NTL.\n                 Please reconfigure LinBox with NTL enabled.");
	}

	// The smithForm with default Method
	template<class Output, class Blackbox>
	Output &smithForm(Output& S,
			  const Blackbox& A)
	{

		smithForm(S, A, Method::Hybrid());
		return S;
	}

#if 0
	// The smithForm for ModularTag
	template<class Output, class Blackbox, class MyMethod>
	Output &smithForm(Output & S,
			  const Blackbox                            &A,
			  const RingCategories::ModularTag          &tag,
			  const MyMethod& M)
	{
		typename Blackbox::Field F = A.field();
		integer p, c; F.characteristic(p); F.cardinality(c);
		if (probab_prime(p) && p == c)
		{	size_t r; rank(r, A);
			S.resize(0);
			size_t n = (A.rowdim() > A.coldim() ? A.coldim() : A.rowdim())-r;
			if (r > 0) S.push_back( std::pair<size_t, integer>(r, 1) );
			if (n > 0) S.push_back( std::pair<size_t, integer>(n, 0) );
		}
		else
		{
			integr x; size_t c;
			for(x = p, c = 0; divides(2, x); x /= 2, ++c);

			if (x == 1 && c <= 32) // (a low power of 2)
			{
				List L;
				LocalSmith<Local2_32> SmithForm;
				SmithForm( L, M, R );
				distinct(L.begin(), L.end(), S);

			}
			//  if (a odd prime power) call local-smith
			else
			{
				IliopoulosElimination::smithIn (M);
				typedef std::list< PIR::Element > List;
				List L;
				for (size_t i = 0; i < M.rowdim(); ++i) L.push_back(M[i][i]);
				distinct(L.begin(), L.end(), S);
			}
		}

		return S;
	}
#endif

#ifdef __LINBOX_HAVE_NTL

	template<>
	std::list<std::pair<integer, size_t> > &
	smithForm(std::list<std::pair<integer, size_t> >& S,
		  const BlasMatrix<PID_integer> 	&A,
		  const RingCategories::IntegerTag      &tag,
		  const Method::Hybrid			& M)
	{
		std::vector<integer> v (A.rowdim() < A.coldim() ? A.rowdim() : A.coldim());
		SmithFormAdaptive::smithForm(v, A);
		distinct(v.begin(), v.end(), S);

		return S;
	}

#endif

#if 0
	// The smithForm with BlackBox Method
	template<class Output, class Blackbox>
	Output &smithForm(Output & S,
			  const Blackbox                      &A,
			  const RingCategories::IntegerTag    &tag,
			  const Method::Blackbox              &M)
	{
		// this will be binary search smith form (EGV')
	}
#endif


} // end of LinBox namespace
#endif // __LINBOX_smith_form_H


// vim:sts=8:sw=8:ts=8:noet:sr:cino=>s,f0,{0,g0,(0,:0,t0,+0,=s
// Local Variables:
// mode: C++
// tab-width: 8
// indent-tabs-mode: nil
// c-basic-offset: 8
// End: