/usr/include/dune/grid/sgrid.hh is in libdune-grid-dev 2.2.1-2.
This file is owned by root:root, with mode 0o644.
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#define DUNE_SGRID_HH
#include <limits>
#include <vector>
#include <stack>
#include <dune/common/fvector.hh>
#include <dune/common/fmatrix.hh>
#include <dune/common/bigunsignedint.hh>
#include <dune/common/collectivecommunication.hh>
#include <dune/common/reservedvector.hh>
#include <dune/geometry/genericgeometry/topologytypes.hh>
#include <dune/grid/common/capabilities.hh>
#include <dune/grid/common/grid.hh>
#include <dune/grid/sgrid/numbering.hh>
#include <dune/grid/common/indexidset.hh>
/*! \file sgrid.hh
This file documents the DUNE grid interface. We use the special implementation for
simple structured grid to illustrate the different classes and their members.
*/
namespace Dune {
//************************************************************************
/*! define name for floating point type used for coordinates in sgrid.
You can change the type for coordinates by changing this single typedef.
*/
typedef double sgrid_ctype;
// globally define the persistent index type
const int sgrid_dim_bits = 24; // bits for encoding each dimension
const int sgrid_level_bits = 6; // bits for encoding level number
const int sgrid_codim_bits = 4; // bits for encoding codimension
//************************************************************************
// forward declaration of templates
template<int dim, int dimworld, class GridImp> class SGeometry;
template<int codim, int dim, class GridImp> class SEntity;
template<int codim, class GridImp> class SEntityPointer;
template<int codim, class GridImp> class SEntitySeed;
template<int codim, PartitionIteratorType, class GridImp> class SLevelIterator;
template<int dim, int dimworld, class ctype> class SGrid;
template<class GridImp> class SIntersection;
template<class GridImp> class SIntersectionIterator;
template<class GridImp> class SHierarchicIterator;
namespace FacadeOptions
{
template<int dim, int dimworld, class ctype, int mydim, int cdim>
struct StoreGeometryReference<mydim, cdim,
SGrid<dim,dimworld,ctype>, SGeometry>
{
static const bool v = false;
};
template<int dim, int dimworld, class ctype, int mydim, int cdim>
struct StoreGeometryReference<mydim, cdim,
const SGrid<dim,dimworld,ctype>, SGeometry>
{
static const bool v = false;
};
}
//************************************************************************
/*!
SGeometry realizes the concept of the geometric part of a mesh entity.
The geometric part of a mesh entity is a \f$d\f$-dimensional object in \f$\mathbf{R}^w\f$
where \f$d\f$ corresponds the template parameter dim and \f$w\f$ corresponds to the
template parameter dimworld.
The \f$d\f$-dimensional object is a polyhedron given by a certain number of corners, which
are vectors in \f$\mathbf{R}^w\f$.
The member function global provides a map from a topologically equivalent polyhedron ("reference element")
in \f$\mathbf{R}^d\f$ to the given polyhedron. This map can be inverted by the member function local, where
an appropriate projection is applied first, when \f$d\neq w\f$.
In the case of a structured mesh discretizing a generalized cube this map is linear
and can be described as \f[ g(l) = s + \sum\limits_{i=0}^{d-1} l_ir^i\f] where \f$s\in\mathbf{R}^w\f$
is a given position vector, the \f$r^i\in\mathbf{R}^w\f$ are given direction vectors and \f$l\in\mathbf{R}^d\f$
is a local coordinate within the reference polyhedron. The direction vectors are assumed to be orthogonal
with respect to the standard Eucliden inner product.
The \f$d\f$-dimensional reference polyhedron is given
by the points \f$\{ (x_0,\ldots,x_{d-1}) \ | \ x_i\in\{0,1\}\ \}\f$.
In order to invert the map for a point \f$p\f$, we have to find a local coordinate \f$l\f$ such
that \f$g(l)=p\f$. Of course this is only possible if \f$d=w\f$. In the general case \f$d\leq w\f$
we determine \f$l\f$ such that
\f[(s,r^k) + \sum\limits_{i=0}^{d-1} l_i (r^i,r^k) = (p,r^k) \ \ \ \forall k=0,\ldots,d-1. \f]
The resulting system is diagonal since the direction vectors are required to be orthogonal.
*/
template<int mydim, int cdim, class GridImp>
class SGeometry
: public GeometryDefaultImplementation<mydim,cdim,GridImp,SGeometry>
{
public:
//! define type used for coordinates in grid module
typedef typename GridImp::ctype ctype;
//! return the element type identifier
GeometryType type () const
{
static const GeometryType cubeType(GeometryType::cube,mydim);
return cubeType;
}
//! here we have always an affine geometry
bool affine() const { return true ; }
//! return the number of corners of this element. Corners are numbered 0...n-1
int corners () const
{
return 1<<mydim;
}
//! return i'th corner of the geometry
FieldVector< ctype, cdim > corner ( const int i ) const
{
return c[i];
}
//! return center of the geometry
FieldVector<ctype, cdim > center ( ) const
{
return centroid;
}
//! maps a local coordinate within reference element to global coordinate in element
FieldVector<ctype, cdim> global (const FieldVector<ctype, mydim>& local) const;
//! maps a global coordinate within the element to a local coordinate in its reference element
FieldVector<ctype, mydim> local (const FieldVector<ctype, cdim>& global) const;
/*! Integration over a general element is done by integrating over the reference element
and using the transformation from the reference element to the global element as follows:
\f[\int\limits_{\Omega_e} f(x) dx = \int\limits_{\Omega_{ref}} f(g(l)) A(l) dl \f] where
\f$g\f$ is the local to global mapping and \f$A(l)\f$ is the integration element.
For a general map \f$g(l)\f$ involves partial derivatives of the map (surface element of
the first kind if \f$d=2,w=3\f$, determinant of the Jacobian of the transformation for
\f$d=w\f$, \f$\|dg/dl\|\f$ for \f$d=1\f$).
For linear elements, the derivatives of the map with respect to local coordinates
do not depend on the local coordinates and are the same over the whole element.
For a structured mesh where all edges are parallel to the coordinate axes, the
computation is the length, area or volume of the element is very simple to compute.
Each grid module implements the integration element with optimal efficieny. This
will directly translate in substantial savings in the computation of finite element
stiffness matrices.
*/
ctype integrationElement (const FieldVector<ctype, mydim>& local) const
{
return volume();
}
/** \brief return volume of geometry */
ctype volume() const;
const FieldMatrix<ctype, mydim, cdim > &jacobianTransposed ( const FieldVector< ctype, mydim > &local ) const;
const FieldMatrix<ctype,cdim,mydim>& jacobianInverseTransposed (const FieldVector<ctype, mydim>& local) const;
//! print internal data
void print (std::ostream& ss, int indent) const;
/*! The first dim columns of As contain the dim direction vectors.
Column dim is the position vector. This format allows a consistent
treatement of all dimensions, including 0 (the vertex).
*/
void make (FieldMatrix<ctype,mydim+1,cdim>& __As);
//! constructor
SGeometry () : builtinverse(false) {}
private:
FieldVector<ctype, cdim> s; //!< position of element
FieldVector<ctype, cdim> centroid; //!< centroid of element
FieldMatrix<ctype,mydim,cdim> A; //!< direction vectors as matrix
array<FieldVector<ctype, cdim>, 1<<mydim> c; //!< coordinate vectors of corners
mutable FieldMatrix<ctype,cdim,mydim> Jinv; //!< storage for inverse of jacobian
mutable bool builtinverse;
};
//! specialization for dim=0, this is a vertex
template<int cdim, class GridImp>
class SGeometry<0,cdim,GridImp>
: public GeometryDefaultImplementation<0,cdim,GridImp,SGeometry>
{
public:
//! define type used for coordinates in grid module
typedef typename GridImp::ctype ctype;
//! return the element type identifier
GeometryType type () const
{
static const GeometryType cubeType(GeometryType::cube,0);
return cubeType;
}
//! here we have always an affine geometry
bool affine() const { return true ; }
//! return the number of corners of this element. Corners are numbered 0...n-1
int corners () const
{
return 1;
}
//! return i'th corner of the geometry
FieldVector<ctype, cdim > corner ( const int i ) const
{
return s;
}
//! return center of the geometry
FieldVector<ctype, cdim > center ( ) const
{
return s;
}
//! print internal data
void print (std::ostream& ss, int indent) const;
//! constructor, makes element from position and direction vectors
void make (FieldMatrix<ctype,1,cdim>& __As);
//! maps a local coordinate within reference element to global coordinate in element
FieldVector<ctype, cdim> global (const FieldVector<ctype, 0>& local) const { return corner(0); }
//! maps a global coordinate within the element to a local coordinate in its reference element
FieldVector<ctype, 0> local (const FieldVector<ctype, cdim>& global) const { return FieldVector<ctype,0> (0.0); }
/*! Integration over a general element is done by integrating over the reference element
and using the transformation from the reference element to the global element as follows:
\f[\int\limits_{\Omega_e} f(x) dx = \int\limits_{\Omega_{ref}} f(g(l)) A(l) dl \f] where
\f$g\f$ is the local to global mapping and \f$A(l)\f$ is the integration element.
For a general map \f$g(l)\f$ involves partial derivatives of the map (surface element of
the first kind if \f$d=2,w=3\f$, determinant of the Jacobian of the transformation for
\f$d=w\f$, \f$\|dg/dl\|\f$ for \f$d=1\f$).
For linear elements, the derivatives of the map with respect to local coordinates
do not depend on the local coordinates and are the same over the whole element.
For a structured mesh where all edges are parallel to the coordinate axes, the
computation is the length, area or volume of the element is very simple to compute.
Each grid module implements the integration element with optimal efficieny. This
will directly translate in substantial savings in the computation of finite element
stiffness matrices.
For this specialisation the integrationElement is always 1.
*/
//! constructor with bool argument makes reference element if true, uninitialized else
SGeometry () {}
/** \brief This dummy routine always returns 1.0.
*
* This routine exists so that algorithms that integrate over grid
* boundaries can also be compiled for 1d-grids.
*/
ctype volume() const
{
return 1;
}
/** \brief This dummy routine always returns 1.0.
*
* This routine exists so that algorithms that integrate over grid
* boundaries can also be compiled for 1d-grids.
*/
ctype integrationElement(const FieldVector<ctype, 0>& local) const {
return volume();
}
const FieldMatrix<ctype, 0, cdim > &jacobianTransposed ( const FieldVector<ctype, 0 > &local ) const
{
static const FieldMatrix<ctype, 0, cdim > dummy ( ctype( 0 ) );
return dummy;
}
const FieldMatrix<ctype,cdim,0>& jacobianInverseTransposed (const FieldVector<ctype, 0>& local) const
{
static const FieldMatrix<ctype,cdim,0> dummy( ctype(0) );
return dummy;
}
protected:
FieldVector<ctype, cdim> s; //!< position of element
};
template <int mydim, int cdim, class GridImp>
inline std::ostream& operator<< (std::ostream& s, SGeometry<mydim,cdim,GridImp>& e)
{
e.print(s,0);
return s;
}
//************************************************************************
/*! SEntityBase contains the part of SEntity that can be defined
without specialization. This is the base for all SEntity classes with dim>0.
*/
template<int codim, int dim, class GridImp, template<int,int,class> class EntityImp>
class SEntityBase :
public EntityDefaultImplementation<codim,dim,GridImp,EntityImp>
{
friend class SEntityPointer<codim,GridImp>;
friend class SIntersectionIterator<GridImp>;
enum { dimworld = GridImp::dimensionworld };
typedef typename GridImp::Traits::template Codim< codim >::GeometryImpl GeometryImpl;
public:
typedef typename GridImp::ctype ctype;
typedef typename GridImp::template Codim<codim>::Geometry Geometry;
typedef typename GridImp::PersistentIndexType PersistentIndexType;
//! level of this element
int level () const
{
return l;
}
//! global index is calculated from the index and grid size
int globalIndex() const;
/** \brief Return the entity seed which contains sufficient information
* to generate the entity again and uses as less memory as possible
*/
SEntitySeed<codim, GridImp> seed () const {
return SEntitySeed<codim, GridImp>(l, index);
}
//! return the element type identifier
GeometryType type () const
{
static const GeometryType cubeType(GeometryType::cube,dim-codim);
return cubeType;
}
//! geometry of this entity
Geometry geometry () const
{
if (!builtgeometry) makegeometry();
// return result
return Geometry( geo );
}
PartitionType partitionType () const { return InteriorEntity; }
//! constructor
SEntityBase (GridImp* _grid, int _l, int _index) :
grid(_grid),
l(_l),
index(_index),
z(grid->z(l,index,codim)),
builtgeometry(false) {}
//! empty constructor
SEntityBase () :
builtgeometry(false) // mark geometry as not built
{}
//! copy constructor
SEntityBase ( const SEntityBase& other ) :
grid(other.grid),
l(other.l),
index(other.index),
z(other.z),
geo(), // do not copy geometry
builtgeometry(false) // mark geometry as not built
{}
//! Reinitialization
void make (GridImp* _grid, int _l, int _id);
//! Reinitialization
void make (int _l, int _id);
//! geometry of this entity
void makegeometry () const;
//! globally unique, persistent index
PersistentIndexType persistentIndex () const
{
return grid->persistentIndex(l, codim, z);
}
//! consecutive, codim-wise, level-wise index
int compressedIndex () const
{
return index;
}
//! consecutive, codim-wise, level-wise index
int compressedLeafIndex () const
{
// codim != dim -> there are no copies of entities
// maxlevel -> ids are fine
if (codim<dim || l==grid->maxLevel())
return compressedIndex();
// this is a vertex which is not on the finest level
// move coordinates up to maxlevel (multiply by 2 for each level
array<int,dim> coord;
for (int k=0; k<dim; k++)
coord[k] = z[k]*(1<<(grid->maxLevel()-l));
// compute number with respect to maxLevel
return grid->n(grid->maxLevel(),coord);
}
protected:
// this is how we implement our elements
GridImp* grid; //!< grid containes mapper, geometry, etc.
int l; //!< level where element is on
int index; //!< my consecutive index
array<int,dim> z; //!< my coordinate, number of even components = codim
mutable GeometryImpl geo; //!< geometry, is only built on demand
mutable bool builtgeometry; //!< true if geometry has been constructed
};
/**
A Grid is a container of grid entities. An entity is parametrized by
the codimension. An entity of codimension c in dimension d is a d-c
dimensional object.
*/
template<int codim, int dim, class GridImp>
class SEntity : public SEntityBase<codim,dim,GridImp,SEntity>
{
typedef Dune::SEntityBase<codim,dim,GridImp,Dune::SEntity> SEntityBase;
friend class SEntityPointer<codim,GridImp>;
friend class SIntersectionIterator<GridImp>;
public:
//! constructor
SEntity (GridImp* _grid, int _l, int _id) :
SEntityBase(_grid,_l,_id) {}
};
/**
A Grid is a container of grid entities. An entity is parametrized
by the codimension. An entity of codimension c in dimension d is a
d-c dimensional object.
Entities of codimension 0 ("elements") are defined through template
specialization. Note that this specialization has an extended
interface compared to the general case
Entities of codimension 0 allow to visit all neighbors, where a
neighbor is an entity of codimension 0 which has a common entity of
codimension 1 with the entity. These neighbors are accessed via an
iterator. This allows the implementation of non-matching meshes. The
number of neigbors may be different from the number of faces/edges
of an element!
*/
/**
A Grid is a container of grid entities. An entity is parametrized by
the codimension. An entity of codimension c in dimension d is a d-c
dimensional object.
Entities of codimension=0 ("Cells") are defined through template
specialization. Note that this specialization has an extended
interface compared to the general case
*/
template<int dim, class GridImp>
class SEntity<0,dim,GridImp> : public SEntityBase<0,dim,GridImp,SEntity>
{
enum { dimworld = GridImp::dimensionworld };
typedef Dune::SEntityBase<0,dim,GridImp,Dune::SEntity> SEntityBase;
using SEntityBase::grid;
using SEntityBase::l;
using SEntityBase::index;
using SEntityBase::z;
typedef typename GridImp::Traits::template Codim< 0 >::GeometryImpl GeometryImpl;
typedef typename GridImp::Traits::template Codim< 0 >::LocalGeometryImpl LocalGeometryImpl;
friend class SEntityPointer<0,GridImp>;
friend class SIntersectionIterator<GridImp>;
public:
typedef typename GridImp::ctype ctype;
typedef typename GridImp::template Codim<0>::Geometry Geometry;
typedef typename GridImp::template Codim<0>::LocalGeometry LocalGeometry;
template <int cd>
struct Codim
{
typedef typename GridImp::template Codim<cd>::EntityPointer EntityPointer;
};
typedef typename GridImp::template Codim<0>::EntityPointer EntityPointer;
typedef typename GridImp::LeafIntersectionIterator IntersectionIterator;
typedef typename GridImp::HierarchicIterator HierarchicIterator;
typedef typename GridImp::PersistentIndexType PersistentIndexType;
//! make HierarchicIterator a friend
friend class SHierarchicIterator<GridImp>;
/**
Intra-element access to entities of codimension cc > codim.
Return number of entities with codimension cc.
*/
template<int cc> int count () const;
/**
Provide access to mesh entity i of given codimension. Entities
are numbered 0 ... count<cc>()-1
*/
template<int cc> typename Codim<cc>::EntityPointer subEntity (int i) const;
//! subentity compressed index
int subCompressedIndex (int codim, int i) const
{
if (codim==0) return this->compressedIndex();
// compute subIndex
return (this->grid)->n(this->l, this->grid->subz(this->z,i,codim));
}
/*! subentity leaf index
\todo add handling of not-leaf vertices
*/
int subCompressedLeafIndex (int codim, int i) const
{
if (codim==0) return this->compressedLeafIndex();
assert(this->l == this->grid->maxLevel());
// compute subIndex
return (this->grid)->n(this->l, this->grid->subz(this->z,i,codim));
}
//! subentity persistent index
PersistentIndexType subPersistentIndex (int codim, int i) const
{
if (codim==0) return this->persistentIndex();
// compute subId
return this->grid->persistentIndex(this->l, codim, this->grid->subz(this->z,i,codim));
}
/**
Intra-level access to intersections with neighboring elements. A
neighbor is an entity of codimension 0 which has an entity of
codimension 1 in commen with this entity. Access to neighbors is
provided using iterators. This allows meshes to be
nonmatching. Returns iterator referencing the first neighbor.
*/
IntersectionIterator ibegin () const;
IntersectionIterator ileafbegin () const;
IntersectionIterator ilevelbegin () const;
//! Reference to one past the last intersection
IntersectionIterator iend () const;
IntersectionIterator ileafend () const;
IntersectionIterator ilevelend () const;
/**
@brief Inter-level access to father element on coarser grid.
Assumes that meshes are nested.
*/
EntityPointer father () const;
//! returns true if father entity exists
bool hasFather () const
{
return (this->level()>0);
}
//! return true if the entity is leaf
bool isLeaf () const
{
return ( this->grid->maxLevel() == this->level() );
}
/**
@brief Location of this element relative to the reference element element of the father.
This is sufficient to interpolate all dofs in conforming case.
Nonconforming may require access to neighbors of father and
computations with local coordinates. On the fly case is somewhat
inefficient since dofs are visited several times. If we store
interpolation matrices, this is tolerable. We assume that
on-the-fly implementation of numerical algorithms is only done for
simple discretizations. Assumes that meshes are nested.
*/
LocalGeometry geometryInFather () const;
/**
@brief Inter-level access to son elements on higher levels<=maxLevel.
This is provided for sparsely stored nested unstructured meshes.
Returns iterator to first son.
*/
HierarchicIterator hbegin (int maxLevel) const;
//! Returns iterator to one past the last son
HierarchicIterator hend (int maxLevel) const;
// members specific to SEntity
//! constructor
SEntity (GridImp* _grid, int _l, int _index) :
SEntityBase(_grid,_l,_index),
built_father(false)
{}
SEntity (const SEntity& other ) :
SEntityBase(other.grid, other.l, other.index ),
built_father(false)
{}
//! Reinitialization
void make (GridImp* _grid, int _l, int _id)
{
SEntityBase::make(_grid,_l,_id);
built_father = false;
}
//! Reinitialization
void make (int _l, int _id)
{
SEntityBase::make(_l,_id);
built_father = false;
}
private:
SEntity();
mutable bool built_father;
mutable int father_index;
mutable LocalGeometryImpl in_father_local;
void make_father() const;
};
//************************************************************************
/*! Mesh entities of codimension 0 ("elements") allow to visit all entities of
codimension 0 obtained through nested, hierarchic refinement of the entity.
Iteration over this set of entities is provided by the HIerarchicIterator,
starting from a given entity.
This is redundant but important for memory efficient implementations of unstructured
hierarchically refined meshes.
*/
struct SHierarchicStackElem {
int l;
int index;
SHierarchicStackElem () : l(-1), index(-1) {}
SHierarchicStackElem (int _l, int _index) {l=_l; index=_index;}
bool operator== (const SHierarchicStackElem& s) const {return !operator!=(s);}
bool operator!= (const SHierarchicStackElem& s) const {return l!=s.l || index!=s.index;}
};
template<class GridImp>
class SHierarchicIterator :
public Dune::SEntityPointer <0,GridImp>
{
friend class SHierarchicIterator<const GridImp>;
enum { dim = GridImp::dimension };
enum { dimworld = GridImp::dimensionworld };
typedef Dune::SEntityPointer<0,GridImp> SEntityPointer;
using SEntityPointer::realEntity;
using SEntityPointer::grid;
using SEntityPointer::l;
using SEntityPointer::index;
public:
typedef typename GridImp::template Codim<0>::Entity Entity;
typedef typename GridImp::ctype ctype;
//! increment
void increment();
/*! constructor. Here is how it works: If with_sons is true, push start
element and all its sons on the stack, so the initial element is popped
last. For an end iterator, push the starting element and no sons. Then
the iteration will stop when both iterators have the same id AND the
stack is empty
*/
SHierarchicIterator (GridImp* _grid,
const Dune::SEntity<0,GridImp::dimension,GridImp>& _e,
int _maxLevel, bool makeend) :
SEntityPointer(_grid,_e.level(),_e.compressedIndex())
{
// without sons, we are done
// (the end iterator is equal to the calling iterator)
if (makeend) return;
// remember element where begin has been called
orig_l = this->entity().level();
orig_index = _grid->getRealImplementation(this->entity()).compressedIndex();
// push original element on stack
SHierarchicStackElem originalElement(orig_l, orig_index);
stack.push(originalElement);
// compute maxLevel
maxLevel = std::min(_maxLevel,this->grid->maxLevel());
// ok, push all the sons as well
push_sons(orig_l,orig_index);
// and pop the first son
increment();
}
private:
int maxLevel; //!< maximum level of elements to be processed
int orig_l, orig_index; //!< element where begin was called (the root of the tree to be processed)
//!< stack holding elements to be processed
std::stack<SHierarchicStackElem, Dune::ReservedVector<SHierarchicStackElem,GridImp::MAXL> > stack;
void push_sons (int level, int fatherid); //!< push all sons of this element on the stack
};
//************************************************************************
/*! Mesh entities of codimension 0 ("elements") allow to visit all neighbors, where
a neighbor is an entity of codimension 0 which has a common entity of codimension 1 with the entity.
These neighbors are accessed via a IntersectionIterator. This allows the implementation of
non-matching meshes. The number of neigbors may be different from the number of faces/edges
of an element!
*/
template<class GridImp>
class SIntersectionIterator
{
enum { dim=GridImp::dimension };
enum { dimworld=GridImp::dimensionworld };
typedef typename GridImp::Traits::template Codim< 1 >::GeometryImpl GeometryImpl;
typedef typename GridImp::Traits::template Codim< 1 >::LocalGeometryImpl LocalGeometryImpl;
public:
typedef typename GridImp::template Codim<0>::Entity Entity;
typedef typename GridImp::template Codim<0>::EntityPointer EntityPointer;
typedef typename GridImp::template Codim<1>::Geometry Geometry;
typedef typename GridImp::template Codim<1>::LocalGeometry LocalGeometry;
typedef Dune::SIntersection<GridImp> IntersectionImp;
typedef Dune::Intersection<const GridImp, Dune::SIntersection> Intersection;
//! know your own dimension
enum { dimension=dim };
//! know your own dimension of world
enum { dimensionworld=dimworld };
//! define type used for coordinates in grid module
typedef typename GridImp::ctype ctype;
//! equality
bool equals(const SIntersectionIterator<GridImp>& i) const;
//! increment
void increment();
//! \brief dereferencing
const Intersection & dereference() const
{
return intersection;
}
//! return EntityPointer to the Entity on the inside of this intersection
//! (that is the Entity where we started this Iterator)
EntityPointer inside() const;
//! return EntityPointer to the Entity on the outside of this intersection
//! (that is the neighboring Entity)
EntityPointer outside() const;
//! return true if intersection is with boundary.
bool boundary () const;
//! return true if intersection is conform.
bool conforming () const;
int boundaryId () const {
if (boundary()) return count + 1;
return 0;
}
int boundarySegmentIndex () const {
if (boundary())
return grid->boundarySegmentIndex(self.level(), count, zred);
return -1;
}
//! return true if neighbor on this level exists
bool neighbor () const;
//! return outer normal
FieldVector<ctype, GridImp::dimensionworld> outerNormal (const FieldVector<ctype, GridImp::dimension-1>& local) const
{
return unitOuterNormal(local);
}
//! return unit outer normal
FieldVector<ctype, GridImp::dimensionworld> unitOuterNormal (const FieldVector<ctype, GridImp::dimension-1>& local) const
{
return centerUnitOuterNormal();
}
//! return unit outer normal at center of intersection geometry
FieldVector<ctype, GridImp::dimensionworld> centerUnitOuterNormal () const
{
// while we are at it, compute normal direction
FieldVector<ctype, dimworld> normal(0.0);
if (count%2)
normal[count/2] = 1.0; // odd
else
normal[count/2] = -1.0; // even
return normal;
}
//! return integration outer normal
FieldVector<ctype, GridImp::dimensionworld> integrationOuterNormal (const FieldVector<ctype, GridImp::dimension-1>& local) const
{
FieldVector<ctype, dimworld> n = unitOuterNormal(local);
n *= geometry().integrationElement(local);
return n;
}
/*! intersection of codimension 1 of this neighbor with element where iteration started.
Here returned element is in LOCAL coordinates of the element where iteration started.
*/
LocalGeometry geometryInInside () const;
/*! intersection of codimension 1 of this neighbor with element where iteration started.
Here returned element is in LOCAL coordinates of neighbor
*/
LocalGeometry geometryInOutside () const;
/*! intersection of codimension 1 of this neighbor with element where iteration started.
Here returned element is in GLOBAL coordinates of the element where iteration started.
*/
Geometry geometry () const;
/** \brief obtain the type of reference element for this intersection */
GeometryType type () const
{
static const GeometryType cubeType(GeometryType::cube,dim-1);
return cubeType;
}
//! local index of codim 1 entity in self where intersection is contained in
int indexInInside () const;
//! local index of codim 1 entity in neighbor where intersection is contained in
int indexInOutside () const;
//! constructor
SIntersectionIterator (GridImp* _grid, const SEntity<0,dim,GridImp >* _self, int _count) :
self(*_self), ne(self), grid(_grid),
partition(_grid->partition(grid->getRealImplementation(ne).l,_self->z)),
zred(_grid->compress(grid->getRealImplementation(ne).l,_self->z)),
intersection(IntersectionImp(*this))
{
// make neighbor
make(_count);
}
SIntersectionIterator (const SIntersectionIterator & other) :
self(other.self), ne(other.ne), grid(other.grid),
partition(other.partition), zred(other.zred),
count(other.count), valid_count(other.valid_count),
valid_nb(other.valid_nb), is_on_boundary(other.is_on_boundary),
built_intersections(false),
intersection(IntersectionImp(*this))
{
}
//! assignment operator
SIntersectionIterator& operator = (const SIntersectionIterator& other)
{
/* We can't assign the grid */
assert(grid == other.grid);
/* Assign data from other */
self = other.self;
ne = other.ne;
partition = other.partition;
zred = other.zred;
count = other.count;
valid_count = other.valid_count;
valid_nb = other.valid_nb;
is_on_boundary = other.is_on_boundary;
/* mark cached data as invalid */
built_intersections = false;
return *this;
}
private:
void make (int _count) const; //!< reinitialze iterator with given neighbor
void makeintersections () const; //!< compute intersections
EntityPointer self; //!< EntityPointer for myself
mutable EntityPointer ne; //!< EntityPointer for neighbor
const GridImp * grid; //!< Pointer to the grid
int partition; //!< partition number of self, needed for coordinate expansion
array<int,dim> zred; //!< reduced coordinates of myself, allows easy computation of neighbors
mutable int count; //!< number of neighbor
mutable bool valid_count; //!< true if count is in range
mutable bool valid_nb; //!< true if nb is initialized
mutable bool is_on_boundary; //!< true if neighbor is otside the domain
mutable bool built_intersections; //!< true if all intersections have been built
mutable LocalGeometryImpl is_self_local; //!< intersection in own local coordinates
mutable GeometryImpl is_global; //!< intersection in global coordinates, map consistent with is_self_local
mutable LocalGeometryImpl is_nb_local; //!< intersection in neighbors local coordinates
Intersection intersection;
};
template<class GridImp>
class SIntersection
{
enum { dim=GridImp::dimension };
enum { dimworld=GridImp::dimensionworld };
public:
typedef typename GridImp::template Codim<0>::Entity Entity;
typedef typename GridImp::template Codim<0>::EntityPointer EntityPointer;
typedef typename GridImp::template Codim<1>::Geometry Geometry;
typedef typename Geometry::LocalCoordinate LocalCoordinate;
typedef typename Geometry::GlobalCoordinate GlobalCoordinate;
typedef typename GridImp::template Codim<1>::LocalGeometry LocalGeometry;
typedef Dune::Intersection<const GridImp, Dune::SIntersectionIterator> Intersection;
//! know your own dimension
enum { dimension=dim };
//! know your own dimension of world
enum { dimensionworld=dimworld };
//! define type used for coordinates in grid module
typedef typename GridImp::ctype ctype;
bool boundary () const
{
return is.boundary();
}
/*! @brief Identifier for boundary segment from macro grid. */
int boundaryId () const
{
return is.boundaryId();
}
/*! @brief index of the boundary segment within the macro grid */
size_t boundarySegmentIndex () const
{
return is.boundarySegmentIndex();
}
/*! @brief return true if intersection is shared with another element. */
bool neighbor () const
{
return is.neighbor();
}
/*! @brief return EntityPointer to the Entity on the inside of this intersection. */
EntityPointer inside() const
{
return is.inside();
}
/*! @brief return EntityPointer to the Entity on the outside of this intersection. */
EntityPointer outside() const
{
return is.outside();
}
/*! @brief return true if intersection is conform. */
bool conforming () const
{
return is.conforming();
}
/*! @brief geometrical information about this intersection in local coordinates of the inside() entity. */
LocalGeometry geometryInInside () const
{
return is.geometryInInside();
}
/*! @brief geometrical information about this intersection in local coordinates of the outside() entity. */
LocalGeometry geometryInOutside () const
{
return is.geometryInOutside();
}
/*! @brief geometrical information about the intersection in global coordinates. */
Geometry geometry () const
{
return is.geometry();
}
/*! @brief obtain the type of reference element for this intersection */
GeometryType type () const
{
return is.type();
}
/*! @brief Local index of codim 1 entity in the inside() entity where intersection is contained in */
int indexInInside () const
{
return is.indexInInside();
}
/*! @brief Local index of codim 1 entity in outside() entity where intersection is contained in */
int indexInOutside () const
{
return is.indexInOutside();
}
/*! @brief Return an outer normal (length not necessarily 1) */
GlobalCoordinate outerNormal (const LocalCoordinate& local) const
{
return is.outerNormal(local);
}
/*! @brief return outer normal scaled with the integration element */
GlobalCoordinate integrationOuterNormal (const LocalCoordinate& local) const
{
return is.integrationOuterNormal(local);
}
/*! @brief Return unit outer normal (length == 1) */
GlobalCoordinate unitOuterNormal (const LocalCoordinate& local) const
{
return is.unitOuterNormal(local);
}
/*! @brief Return unit outer normal (length == 1) */
GlobalCoordinate centerUnitOuterNormal () const
{
return is.centerUnitOuterNormal();
}
//! constructor
SIntersection (const SIntersectionIterator<GridImp> & is_) : is(is_) {}
private:
#ifndef DOXYGEN // doxygen can't handle this recursive usage
const SIntersectionIterator<GridImp> & is;
#endif
};
//************************************************************************
/** \brief a stack of pointers with auto destruction if the stack is
destructed
*/
template <class T>
class AutoPtrStack : public std::stack<T*>
{
public:
~AutoPtrStack()
{
while(! this->empty())
{
T* e = this->top();
delete e;
this->pop();
}
}
};
/*! Acts as a pointer to an entities of a given codimension.
*/
template<int codim, class GridImp>
class SEntityPointer
{
enum { dim = GridImp::dimension };
friend class SIntersectionIterator<GridImp>;
public:
typedef SEntityPointer<codim,GridImp> EntityPointerImp;
typedef typename GridImp::template Codim<codim>::Entity Entity;
//! codimension of entity pointer
enum { codimension = codim };
//! equality
bool equals(const SEntityPointer<codim,GridImp>& i) const;
//! dereferencing
Entity& dereference() const;
//! ask for level of entity
int level () const;
//! constructor
SEntityPointer (GridImp * _grid, int _l, int _index) :
grid(_grid), l(_l), index(_index),
e(0)
{
}
//! constructor
SEntityPointer (const SEntity<codim,dim,GridImp> & _e) :
grid(_e.grid), l(_e.l), index(_e.index),
e(0)
{
}
//! constructor
SEntityPointer (const SEntityPointer<codim,GridImp>& other) :
grid(other.grid), l(other.l), index(other.index),
e( 0 )
{
}
//! destructor pointer
~SEntityPointer()
{
if( e )
enStack().push( e );
#ifndef NDEBUG
index = -1;
#endif
}
//! assignment operator
SEntityPointer& operator = (const SEntityPointer& other)
{
grid = other.grid;
l = other.l;
index = other.index;
// free current entity
if( e )
enStack().push( e );
e = 0;
return *this;
}
protected:
inline SEntity<codim,dim,GridImp>& realEntity() const
{
return grid->getRealImplementation(entity());
}
inline Entity& entity() const
{
if( ! e )
{
e = getEntity( grid, l, index );
}
return *e;
}
typedef AutoPtrStack< Entity > EntityStackType;
static inline EntityStackType& enStack()
{
static EntityStackType eStack;
return eStack;
}
inline Entity* getEntity(GridImp* _grid, int _l, int _id ) const
{
// get stack reference
EntityStackType& enSt = enStack();
if( enSt.empty() )
{
return (new Entity(SEntity<codim,dim,GridImp>(_grid, _l, _id)));
}
else
{
Entity* e = enSt.top();
enSt.pop();
grid->getRealImplementation(*e).make(_grid, _l,_id);
return e;
}
}
GridImp* grid; //!< my grid
int l; //!< level where element is on
mutable int index; //!< my consecutive index
mutable Entity* e; //!< virtual entity
};
/*! describes the minimal information necessary to create a fully functional SEntity
*/
template<int codim, class GridImp>
class SEntitySeed
{
enum { dim = GridImp::dimension };
public:
enum { codimension = codim };
//! constructor
SEntitySeed (int l, int index) :
_l(l), _index(index)
{}
int level () const { return this->_l; }
int index () const { return this->_index; }
private:
int _l; //!< level where element is on
int _index; //!< my consecutive index
};
//************************************************************************
/*! Enables iteration over all entities of a given codimension and level of a grid.
*/
template<int codim, PartitionIteratorType pitype, class GridImp>
class SLevelIterator :
public Dune::SEntityPointer <codim,GridImp>
{
friend class SLevelIterator<codim, pitype,const GridImp>;
enum { dim = GridImp::dimension };
typedef Dune::SEntityPointer<codim,GridImp> SEntityPointer;
using SEntityPointer::realEntity;
using SEntityPointer::l;
using SEntityPointer::index;
public:
typedef typename GridImp::template Codim<codim>::Entity Entity;
//! increment
void increment();
//! constructor
SLevelIterator (GridImp * _grid, int _l, int _id) :
SEntityPointer(_grid,_l,_id) {}
};
//========================================================================
/*!
\brief implementation of index set
*/
//========================================================================
template<class GridImp>
class SGridLevelIndexSet : public IndexSet<GridImp,SGridLevelIndexSet<GridImp> >
{
typedef SGridLevelIndexSet< GridImp > This;
typedef IndexSet< GridImp, This > Base;
enum { dim = GridImp::dimension };
public:
//! constructor stores reference to a grid and level
SGridLevelIndexSet ( const GridImp &g, int l )
: grid( g ),
level( l )
{
// TODO move list of geometrytypes to grid, can be computed static (singleton)
// contains a single element type;
for (int codim=0; codim<=GridImp::dimension; codim++)
mytypes[codim].push_back(GeometryType(GeometryType::cube,GridImp::dimension-codim));
}
//! get index of an entity
template<int cd>
int index (const typename GridImp::Traits::template Codim<cd>::Entity& e) const
{
return grid.getRealImplementation(e).compressedIndex();
}
template< int cc >
int subIndex ( const typename GridImp::Traits::template Codim< cc >::Entity &e,
int i, unsigned int codim ) const
{
if( cc == 0 )
return grid.getRealImplementation(e).subCompressedIndex(codim, i);
else
DUNE_THROW( NotImplemented, "subIndex for higher codimension entity not implemented for SGrid." );
}
// return true if the given entity is contained in \f$E\f$.
template< class EntityType >
bool contains ( const EntityType &e ) const
{
return (e.level() == level);
}
//! get number of entities of given type and level (the level is known to the object)
int size (GeometryType type) const
{
return grid.size( level, type );
}
//! return size of set for a given codim
int size (int codim) const
{
return grid.size( level, codim );
}
//! deliver all geometry types used in this grid
const std::vector<GeometryType>& geomTypes (int codim) const
{
return mytypes[codim];
}
private:
const GridImp& grid;
int level;
std::vector<GeometryType> mytypes[GridImp::dimension+1];
};
// Leaf Index Set
template<class GridImp>
class SGridLeafIndexSet : public IndexSet<GridImp,SGridLeafIndexSet<GridImp> >
{
typedef SGridLeafIndexSet< GridImp > This;
typedef IndexSet< GridImp, This > Base;
enum { dim = GridImp::dimension };
public:
//! constructor stores reference to a grid and level
explicit SGridLeafIndexSet ( const GridImp &g )
: grid( g )
{
// TODO move list of geometrytypes to grid, can be computed static (singleton)
// contains a single element type;
for (int codim=0; codim<=dim; codim++)
mytypes[codim].push_back(GeometryType(GeometryType::cube,dim-codim));
}
//! get index of an entity
/*
We use the remove_const to extract the Type from the mutable class,
because the const class is not instantiated yet.
*/
template<int cd>
int index (const typename remove_const<GridImp>::type::Traits::template Codim<cd>::Entity& e) const
{
return grid.getRealImplementation(e).compressedLeafIndex();
}
template< int cc >
int subIndex ( const typename GridImp::Traits::template Codim< cc >::Entity &e,
int i, unsigned int codim ) const
{
if( cc == 0 )
return grid.getRealImplementation(e).subCompressedIndex(codim, i);
else
DUNE_THROW( NotImplemented, "subIndex for higher codimension entity not implemented for SGrid." );
}
//! get number of entities of given type
int size (GeometryType type) const
{
return grid.size( grid.maxLevel(), type );
}
//! return size of set for a given codim
int size (int codim) const
{
return grid.size( grid.maxLevel(), codim );
}
// return true if the given entity is contained in \f$E\f$.
template< class EntityType >
bool contains ( const EntityType &e ) const
{
return (e.level() == grid.maxLevel());
}
//! deliver all geometry types used in this grid
const std::vector<GeometryType>& geomTypes (int codim) const
{
return mytypes[codim];
}
private:
const GridImp& grid;
std::vector<GeometryType> mytypes[dim+1];
};
//========================================================================
/*!
\brief persistent, globally unique Ids
*/
//========================================================================
template<class GridImp>
class SGridGlobalIdSet :
public IdSet<GridImp,SGridGlobalIdSet<GridImp>, typename remove_const<GridImp>::type::PersistentIndexType>
/*
We used the remove_const to extract the Type from the mutable class,
because the const class is not instantiated yet.
*/
{
typedef SGridGlobalIdSet< GridImp > This;
public:
//! import default implementation of subId<cc>
//! \todo remove after next release
using IdSet<GridImp,SGridGlobalIdSet<GridImp>, typename remove_const<GridImp>::type::PersistentIndexType>::subId;
//! define the type used for persisitent indices
/*
We use the remove_const to extract the Type from the mutable class,
because the const class is not instantiated yet.
*/
typedef typename remove_const<GridImp>::type::PersistentIndexType IdType;
//! constructor stores reference to a grid
explicit SGridGlobalIdSet ( const GridImp &g )
: grid( g )
{}
//! get id of an entity
/*
We use the remove_const to extract the Type from the mutable class,
because the const class is not instantiated yet.
*/
template<int cd>
IdType id (const typename remove_const<GridImp>::type::Traits::template Codim<cd>::Entity& e) const
{
return grid.getRealImplementation(e).persistentIndex();
}
//! get id of subentity
/*
We use the remove_const to extract the Type from the mutable class,
because the const class is not instantiated yet.
*/
IdType subId ( const typename remove_const< GridImp >::type::Traits::template Codim< 0 >::Entity &e,
int i, unsigned int codim ) const
{
return grid.getRealImplementation(e).subPersistentIndex(codim, i);
}
private:
const GridImp& grid;
};
template<int dim, int dimworld, class ctype>
struct SGridFamily
{
typedef GridTraits<dim,dimworld,Dune::SGrid<dim,dimworld,ctype>,
SGeometry,SEntity,
SEntityPointer,SLevelIterator,
SIntersection, // leaf intersection
SIntersection, // level intersection
SIntersectionIterator, // leaf intersection iter
SIntersectionIterator, // level intersection iter
SHierarchicIterator,
SLevelIterator,
SGridLevelIndexSet<const SGrid<dim,dimworld,ctype> >,
SGridLeafIndexSet<const SGrid<dim,dimworld,ctype> >,
SGridGlobalIdSet<const SGrid<dim,dimworld,ctype> >,
bigunsignedint<dim*sgrid_dim_bits+sgrid_level_bits+sgrid_codim_bits>,
SGridGlobalIdSet<const SGrid<dim,dimworld,ctype> >,
bigunsignedint<dim*sgrid_dim_bits+sgrid_level_bits+sgrid_codim_bits>,
CollectiveCommunication<Dune::SGrid<dim,dimworld,ctype> >,
DefaultLevelGridViewTraits, DefaultLeafGridViewTraits,
SEntitySeed>
Traits;
};
//************************************************************************
/**
\brief [<em> provides \ref Dune::Grid </em>]
\brief A structured mesh in d dimensions consisting of "cubes" (pilot implementation of the %Dune grid interface, for debugging only).
\ingroup GridImplementations
This module describes the pilot implementation of the %Dune grid interface.
It implements the grid interface for simple structured meshes.
\warning SGrid is slow. It is intended for debugging only.
The following class diagram shows how the classes are related with
each other:
\image html sgridclasses.png "Class diagram for classes in the grid interface"
\image latex sgridclasses.eps "Class diagram for classes in the grid interface" width=\textwidth
Short description of the classes:
- SGeometry is a class template providing the geometric part of a grid entity, i.e. a general polyhedron
with a mapping from a reference polyhedron to the actual polyhedron.
- SLevelIterator is a class template which allows to iterate over all grid entities of a given
codimension and level.
- SEntity is a class template realizing the grid entities. Grid entities are the constituents
of a grid. Grid entities of codimension 0 and codimension dim are defines through specialization.
Entities can be used as template parameters to generic algorithms. Each entity must therefore
provide the nested classes Geometry, LevelIterator, HierarchicIterator and IntersectionIterator.
Geometry and LevelIterator are derived from the classes SELement and SLevelIterator.
Note that entities of codimension 0 and dim have an extended interface.
- SEntity::IntersectionIterator provides access to all entities of codimension 0 sharing an object of codimension 1
with the given entity of codimension 0. This interface covers nonmatching grids.
- SEntity::HierarchicIterator provides access to the sons of an entity of codimension 0.
- SGrid is conceptualized as a container of grid entities of various codimensions. Since grids
are used as template parameters to generic algorithms they must include the nested classes
LevelIterator and Entity which are derived from SLevelIterator and SEntity.
A Grid is a container of grid entities. Given a dimension dim these entities have a
codimension codim with 0 <= codim <= dim.
The Grid is assumed to be hierachically refined and nested. It enables iteration over
entities of a given level and codimension.
All information is provided to allocate degrees of freedom in appropriate vector
data structures.
\note When SGrid is instantiated with dimworld strictly greater than dim, the result is a
dim-dimensional structured grid which is embedded in the first dim components of
dimworld-dimensional Euclidean space.
*/
template<int dim, int dimworld, typename _ctype = sgrid_ctype>
class SGrid : public GridDefaultImplementation <dim,dimworld,_ctype,SGridFamily<dim,dimworld,_ctype> >
{
public:
typedef SGridFamily<dim,dimworld,_ctype> GridFamily;
typedef bigunsignedint<dim*sgrid_dim_bits+sgrid_level_bits+sgrid_codim_bits> PersistentIndexType;
// need for friend declarations in entity
typedef SGridLevelIndexSet<SGrid<dim,dimworld> > LevelIndexSetType;
typedef SGridLeafIndexSet<SGrid<dim,dimworld> > LeafIndexSetType;
typedef SGridGlobalIdSet<SGrid<dim,dimworld> > GlobalIdSetType;
typedef typename SGridFamily<dim,dimworld,_ctype>::Traits Traits;
//! maximum number of levels allowed
enum { MAXL=32 };
//! define type used for coordinates in grid module
typedef _ctype ctype;
// constructors
/*! @brief Make an SGrid from extend and number of cells per direction
\param[in] N_ number of cells in each direction on coarsest level
\param[in] H_ extend of the unit cube in each dimension
Note: The origin of the cube is always at (0,0,...,0), only the extend is given.
*/
SGrid (const int * const N_, const ctype * const H_);
/*! @brief Make an SGrid from position, extend and number of cells per direction
\param[in] N_ number of cells in each direction on coarsest level
\param[in] L_ position of origin of the cube
\param[in] H_ position of the upper right corner of the cube
*/
SGrid (const int * const N_, const ctype * const L_, const ctype * const H_);
/*! @brief Make an SGrid from position, extend and number of cells per direction
\param[in] N_ number of cells in each direction on coarsest level
\param[in] L_ position of origin of the cube
\param[in] H_ position of the upper right corner of the cube
Note: This constructor uses FieldVectors instead of built-in arrays. This is compatible
with the YaspGrid class.
*/
SGrid (FieldVector<int,dim> N_, FieldVector<ctype,dim> L_, FieldVector<ctype,dim> H_);
//! @brief empty constructor making grid of unit square discretized with one cell
SGrid ();
//! @brief SGrid destructor
~SGrid ();
/*! Return maximum level defined in this grid. Levels are numbered
0 ... maxLevel with 0 the coarsest level. */
int maxLevel() const;
//! Iterator to first entity of given codim on level
template<int cd, PartitionIteratorType pitype>
typename Traits::template Codim<cd>::template Partition<pitype>::LevelIterator lbegin (int level) const;
//! one past the end on this level
template<int cd, PartitionIteratorType pitype>
typename Traits::template Codim<cd>::template Partition<pitype>::LevelIterator lend (int level) const;
//! Iterator to first entity of given codim on level
template<int cd>
typename Traits::template Codim<cd>::template Partition<All_Partition>::LevelIterator lbegin (int level) const
{
return lbegin<cd,All_Partition>(level);
}
//! one past the end on this level
template<int cd>
typename Traits::template Codim<cd>::template Partition<All_Partition>::LevelIterator lend (int level) const
{
return lend<cd,All_Partition>(level);
}
//! return LeafIterator which points to the first entity
template<int cd, PartitionIteratorType pitype>
typename Traits::template Codim<cd>::template Partition<pitype>::LeafIterator leafbegin () const;
//! one past the end on the leaf level
template<int cd, PartitionIteratorType pitype>
typename Traits::template Codim<cd>::template Partition<pitype>::LeafIterator leafend () const;
//! return LeafIterator which points to the first entity
template<int cd>
typename Traits::template Codim<cd>::template Partition<All_Partition>::LeafIterator leafbegin () const
{
return leafbegin<cd,All_Partition>();
}
//! return LeafIterator which points behind the last entity
template<int cd>
typename Traits::template Codim<cd>::template Partition<All_Partition>::LeafIterator leafend () const
{
return leafend<cd,All_Partition>();
}
// \brief obtain EntityPointer from EntitySeed. */
template <typename Seed>
typename Traits::template Codim<Seed::codimension>::EntityPointer
entityPointer(const Seed& seed) const
{
enum { codim = Seed::codimension };
return SEntityPointer<codim,const SGrid<dim,dimworld> >(this,seed.level(),seed.index());
}
/*! The communication interface
@tparam T array class holding data associated with the entities
@tparam P type used to gather/scatter data in and out of the message buffer
@tparam codim communicate entites of given codim
@param t array holding data associated with the entities
@param iftype one of the predifined interface types, throws error if it is not implemented
@param dir choose beetween forward and backward communication
@param level communicate for entities on the given level
Implements a generic communication function sending an object of type P for each entity
in the intersection of two processors. P has two methods gather and scatter that implement
the protocol. Therefore P is called the "protocol class".
*/
template<class T, template<class> class P, int codim>
void communicate (T& t, InterfaceType iftype, CommunicationDirection dir, int level)
{
// SGrid is sequential and has no periodic boundaries, so do nothing ...
return;
}
//! number of grid entities per level and codim
int size (int level, int codim) const;
//! number of leaf entities per codim in this process
int size (int codim) const
{
return size(maxLevel(),codim);
}
//! number of entities per level and geometry type in this process
int size (int level, GeometryType type) const
{
return (type.isCube()) ? size(level,dim-type.dim()) : 0;
}
//! number of leaf entities per codim and geometry type in this process
int size (GeometryType type) const
{
return size(maxLevel(),type);
}
//! \brief returns the number of boundary segments within the macro grid
size_t numBoundarySegments () const
{
return boundarysize;
}
//! number of grid entities of all level for given codim
int global_size (int codim) const;
//! return size (= distance in graph) of overlap region
int overlapSize (int level, int codim)
{
return 0;
}
//! return size (= distance in graph) of ghost region
int ghostSize (int level, int codim)
{
return 0;
}
// these are all members specific to sgrid
/** \brief Refine mesh globally by one refCount levels */
void globalRefine (int refCount);
/** \brief Get number of elements in each coordinate direction */
const array<int, dim>& dims(int level) const {
return N[level];
}
/** \brief Get lower left corner */
const FieldVector<ctype, dimworld>& lowerLeft() const {
return low;
}
/** \brief Get upper right corner */
FieldVector<ctype, dimworld> upperRight() const {
return H;
}
//! map adapt to global refine
bool adapt ()
{
globalRefine(1);
return true;
}
// The new index sets from DDM 11.07.2005
const typename Traits::GlobalIdSet& globalIdSet() const
{
return *theglobalidset;
}
const typename Traits::LocalIdSet& localIdSet() const
{
return *theglobalidset;
}
const typename Traits::LevelIndexSet& levelIndexSet(int level) const
{
assert(level>=0 && level<=maxLevel());
return *(indexsets[level]);
}
const typename Traits::LeafIndexSet& leafIndexSet() const
{
return *theleafindexset;
}
/*!
@name dummy parallel functions
@{
*/
template<class DataHandle>
void communicate (DataHandle& data, InterfaceType iftype, CommunicationDirection dir, int level) const
{
}
template<class DataHandle>
void communicate (DataHandle& data, InterfaceType iftype, CommunicationDirection dir) const
{
}
const CollectiveCommunication<SGrid>& comm () const
{
return ccobj;
}
//! return size (= distance in graph) of overlap region
int overlapSize (int level, int codim) const
{
return 0;
}
//! return size (= distance in graph) of overlap region
int overlapSize (int codim) const
{
return 0;
}
//! return size (= distance in graph) of ghost region
int ghostSize (int level, int codim) const
{
return 0;
}
//! return size (= distance in graph) of ghost region
int ghostSize (int codim) const
{
return 0;
}
/*
@}
*/
private:
/*
Make associated classes friends to grant access to the real entity
*/
friend class Dune::SGridLevelIndexSet<Dune::SGrid<dim,dimworld> >;
friend class Dune::SGridLeafIndexSet<Dune::SGrid<dim,dimworld> >;
friend class Dune::SGridGlobalIdSet<Dune::SGrid<dim,dimworld> >;
friend class Dune::SIntersectionIterator<Dune::SGrid<dim,dimworld> >;
friend class Dune::SHierarchicIterator<Dune::SGrid<dim,dimworld> >;
friend class Dune::SEntity<0,dim,Dune::SGrid<dim,dimworld> >;
friend class Dune::SGridLevelIndexSet<const Dune::SGrid<dim,dimworld> >;
friend class Dune::SGridLeafIndexSet<const Dune::SGrid<dim,dimworld> >;
friend class Dune::SGridGlobalIdSet<const Dune::SGrid<dim,dimworld> >;
friend class Dune::SIntersectionIterator<const Dune::SGrid<dim,dimworld> >;
friend class Dune::SHierarchicIterator<const Dune::SGrid<dim,dimworld> >;
friend class Dune::SEntity<0,dim,const Dune::SGrid<dim,dimworld> >;
template<int codim_, int dim_, class GridImp_, template<int,int,class> class EntityImp_>
friend class Dune::SEntityBase;
template<int codim_, class GridImp_>
friend class Dune::SEntityPointer;
template<int codim_, int dim_, class GridImp_, template<int,int,class> class EntityImp_>
friend class Entity;
//! map expanded coordinates to position
FieldVector<ctype, dimworld> pos (int level, array<int,dim>& z) const;
//! compute codim from coordinate
int calc_codim (int level, const array<int,dim>& z) const;
//! compute number from expanded coordinate
int n (int level, const array<int,dim>& z) const;
//! compute coordinates from number and codimension
array<int,dim> z (int level, int i, int codim) const;
//! compute zentity of subentity of given codim
array<int,dim> subz (const array<int,dim> & z, int i, int codim) const;
//! compress from expanded coordinates to grid for a single partition number
array<int,dim> compress (int level, const array<int,dim>& z) const;
//! expand with respect to partition number
array<int,dim> expand (int level, const array<int,dim>& r, int b) const;
/*! There are \f$2^d\f$ possibilities of having even/odd coordinates.
The binary representation is called partition number.
*/
int partition (int level, const array<int,dim>& z) const;
//! given reduced coordinates of an element, determine if element is in the grid
bool exists (int level, const array<int,dim>& zred) const;
// compute boundary segment index for a given zentity and a face
int boundarySegmentIndex (int l, int face, const array<int,dim> & zentity) const
{
array<int,dim-1> zface;
int dir = face/2;
int side = face%2;
// compute z inside the global face
for (int i=0; i<dir; i++) zface[i] = zentity[i]/(1<<l);
for (int i=dir+1; i<dim; i++) zface[i-1] = zentity[i]/(1<<l);
zface = boundarymapper[dir].expand(zface, 0);
// compute index in the face
int index = boundarymapper[dir].n(zface);
// compute offset
for (int i=0; i<dir; i++)
index += 2*boundarymapper[i].elements(0);
index += side*boundarymapper[dir].elements(0);
return index;
}
// compute persistent index for a given zentity
PersistentIndexType persistentIndex (int l, int codim, const array<int,dim> & zentity) const
{
if (codim!=dim)
{
// encode codim, this would actually not be necessary
// because z is unique in codim
PersistentIndexType id(codim);
// encode level
id = id << sgrid_level_bits;
id = id+PersistentIndexType(l);
// encode coordinates
for (int i=dim-1; i>=0; i--)
{
id = id << sgrid_dim_bits;
id = id+PersistentIndexType(zentity[i]);
}
return id;
}
else
{
// determine min number of trailing zeroes
// consider that z is on the doubled grid !
int trailing = 1000;
for (int i=0; i<dim; i++)
{
// count trailing zeros
int zeros = 0;
for (int j=0; j<l; j++)
if (zentity[i]&(1<<(j+1)))
break;
else
zeros++;
trailing = std::min(trailing,zeros);
}
// determine the level of this vertex
int level = l-trailing;
// encode codim
PersistentIndexType id(dim);
// encode level
id = id << sgrid_level_bits;
id = id+PersistentIndexType(level);
// encode coordinates
for (int i=dim-1; i>=0; i--)
{
id = id << sgrid_dim_bits;
id = id+PersistentIndexType(zentity[i]>>trailing);
}
return id;
}
}
// disable copy and assign
SGrid(const SGrid &) {}
SGrid & operator = (const SGrid &) { return *this; }
// generate SGrid
void makeSGrid (const array<int,dim>& N_, const FieldVector<ctype, dim>& L_, const FieldVector<ctype, dim>& H_);
/*
internal data
*/
CollectiveCommunication<SGrid> ccobj;
ReservedVector<SGridLevelIndexSet<const SGrid<dim,dimworld> >*, MAXL> indexsets;
SGridLeafIndexSet<const SGrid<dim,dimworld> > *theleafindexset;
SGridGlobalIdSet<const SGrid<dim,dimworld> > *theglobalidset;
int L; // number of levels in hierarchic mesh 0<=level<L
FieldVector<ctype, dim> low; // lower left corner of the grid
FieldVector<ctype, dim> H; // length of cube per direction
array<int,dim> *N; // number of elements per direction
FieldVector<ctype, dim> *h; // mesh size per direction
mutable CubeMapper<dim> *mapper;// a mapper for each level
// boundary segement index set
array<CubeMapper<dim-1>, dim> boundarymapper; // a mapper for each coarse grid face
int boundarysize;
// faster implementation of subIndex
mutable array <int,dim> zrefStatic; // for subIndex of SEntity
mutable array <int,dim> zentityStatic; // for subIndex of SEntity
};
namespace Capabilities
{
/** \struct isParallel
\ingroup SGrid
*/
/** \struct hasBackupRestoreFacilities
\ingroup SGrid
*/
/** \brief SGrid has only one geometry type for codim 0 entities
\ingroup SGrid
*/
template<int dim, int dimw>
struct hasSingleGeometryType< SGrid<dim,dimw> >
{
static const bool v = true;
static const unsigned int topologyId = GenericGeometry :: CubeTopology< dim > :: type :: id ;
};
/** \brief SGrid is a Cartesian grid
\ingroup SGrid
*/
template<int dim, int dimw>
struct isCartesian< SGrid<dim,dimw> >
{
static const bool v = true;
};
/** \brief SGrid has entities for all codimension
\ingroup SGrid
*/
template<int dim, int dimw, int cdim>
struct hasEntity< SGrid<dim,dimw>, cdim>
{
static const bool v = true;
};
/** \brief SGrid is levelwise conforming
\ingroup SGrid
*/
template<int dim, int dimw>
struct isLevelwiseConforming< SGrid<dim,dimw> >
{
static const bool v = true;
};
/** \brief SGrid is leafwise conforming
\ingroup SGrid
*/
template<int dim, int dimw>
struct isLeafwiseConforming< SGrid<dim,dimw> >
{
static const bool v = true;
};
} // end namespace Capabilities
} // end namespace Dune
#include"sgrid/sgrid.cc"
#endif
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