/etc/boxshade/box_pep.grp is in boxshade 3.3.1-8.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 | This file is a Amino-acid grouping file for use with NEWBOX.
Each line contains a set of amino acids which are considered
'similar' when calculating the consensus. The .SIM file is different
and is used in colouring residues that are "similar" to a single
consensus residue.
Other format requirements are the same as for SIMPLIFY.TXT in the
GCG-package.
..
FYW
ILVM
RK
DE
GA
TS
NQ
|