/usr/share/doc/t-coffee-examples/p250 is in t-coffee-examples 10.00.r1613-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 | CLUSTAL FORMAT for T-COFFEE Version_4.32 [http://www.tcoffee.org], CPU=13.89 sec, SCORE=36, Nseq=19, Len=342
sp|O35205|GRAK_MOUSE ------MRFSSWALVSLV------------------------AGVYMS----SECFHTEI
sp|Q7YRZ7|GRAA_BOVIN -MNIPFPFSFPPAICLLL------------------------IPGVFP----VSC--EGI
sp|P08884|GRAE_MOUSE -----------MPPVLIL------------------------LTLLLP----LGAGAEEI
sp|Q06606|GRZ2_RAT -----------MFLFLFF------------------------LVAILP----VNTEGGEI
sp|P21844|MCPT5_MOUSE ----------MHLLTLHL------------------------LLLLLG----SSTKAGEI
sp|P03953|CFAD_MOUSE ------MHSSVYFVALVI------------------------LGAAVC----AAQPRGRI
sp|P00773|ELA1_RAT -----MLRFLVFASLVLY------------------------GHSTQD----FPETNARV
sp|Q00871|CTRB1_PENVA ----MIGKLSLLLVCVAV------ASGNPAAGKPWHWKSPKPLVDPRI----HVNATPRI
sp|P08246|ELNE_HUMAN --MTLGRRLACLFLACVL------------------------PALLLG----GTALASEI
sp|P20160|CAP7_HUMAN -----MTRLTVLALLAGL------------------------LASSRA----GSSPLLDI
sp|P80015|CAP7_PIG -----------------------------------------------------------I
sp|Q03238|GRAM_RAT -----------LLLLLAL------------------------KTLWAV----GNRFEAQI
sp|P00757|KLKB4_MOUSE --------MWFLIL---F------------------------LALSLGGI----DAAPPV
sp|Q6H321|KLK2_HORSE --------MWFLVL---C------------------------LDLSLGETGALPPIQSRI
sp|Q91VE3|KLK7_MOUSE ------MGVWLLSLITVL------------------------LSLALE----TAGQGERI
sp|Q9Y5K2|KLK4_HUMAN MATAGNPWGWFLGYLILG------------------------VAGSL-----VSGSCSQI
sp|P29786|TRY3_AEDAE -----MNQFLFVSFCALLDSAKVSAAT---------------------------LSSGRI
sp|P35037|TRY3_ANOGA -----MISNKIAILLAVLVVAVACAQARVAQQHRSVQALPRFLPRPKY------DVGHRI
sp|P07338|CTRB1_RAT ------MAFLWLVSCFALVGATFG--------------------CGVPTIQPVLTGLSRI
:
sp|O35205|GRAK_MOUSE IGGREVQPHSRPFMASIQYR----SK--HICGGVLIHPQWVLTAAHCYSWFPRGHSPTVV
sp|Q7YRZ7|GRAA_BOVIN IGGNEVAPHTRRYMALIK------GL--KLCAGALIKENWVLTAAHC----DLKGNPQVI
sp|P08884|GRAE_MOUSE IGGHVVKPHSRPYMAFVKSVDIEGNR--RYCGGFLVQDDFVLTAAHCRN-----RTMTVT
sp|Q06606|GRZ2_RAT IWGTESKPHSRPYMAFIKFYDSNSEP--HHCGGFLVAKDIVMTAAHCNG-----RNIKVT
sp|P21844|MCPT5_MOUSE IGGTECIPHSRPYMAYLEIVTSENYL--SACSGFLIRRNFVLTAAHCAG-----RSITVL
sp|P03953|CFAD_MOUSE LGGQEAAAHARPYMASVQVN----GT--HVCGGTLLDEQWVLSAAHCMDGVTDDDSVQVL
sp|P00773|ELA1_RAT VGGAEARRNSWPSQISLQYLS--GGSWYHTCGGTLIRRNWVMTAAHCVSSQ-M--TFRVV
sp|Q00871|CTRB1_PENVA VGGVEATPHSWPHQAALFI----DDM--YFCGGSLISSEWVLTAAHCMDGA-G--FVEVV
sp|P08246|ELNE_HUMAN VGGRRARPHAWPFMVSLQL----RGG--HFCGATLIAPNFVMSAAHCVANV-NVRAVRVV
sp|P20160|CAP7_HUMAN VGGRKARPRQFPFLASIQN----QGR--HFCGGALIHARFVMTAASCFQSQ-NPGVSTVV
sp|P80015|CAP7_PIG VGGRRAQPQEFPFLASIQK----QGR--PFCAGALVHPRFVLTAASCFRGK-NSGSASVV
sp|Q03238|GRAM_RAT IGGREAVPHSRPYMVSLQN----TKS--HMCGGVLVHQKWVLTAAHCLSEP--LQQLKLV
sp|P00757|KLKB4_MOUSE QSQVDC-ENSQPWHVAVYR----FNK--YQCGGVLLDRNWVLTAAHCYN-----DKYQVW
sp|Q6H321|KLK2_HORSE IGGWECEKHSKPWQVAVYH----QGH--FQCGGVLVHPQWVLTAAHCMS-----DDYQIW
sp|Q91VE3|KLK7_MOUSE IDGYKCKEGSHPWQVALLK----GNQ--LHCGGVLVDKYWVLTAAHCKM-----GQYQVQ
sp|Q9Y5K2|KLK4_HUMAN INGEDCSPHSQPWQAALVM----ENE--LFCSGVLVHPQWVLSAAHCFQ-----NSYTIG
sp|P29786|TRY3_AEDAE VGGFQIDIAEVPHQVSLQR----SGR--HFCGGSIISPRWVLTRAHCTTNT-DPAAYTIR
sp|P35037|TRY3_ANOGA VGGFEIDVSETPYQVSLQY----FNS--HRCGGSVLNSKWILTAAHCTVNL-QPSSLAVR
sp|P07338|CTRB1_RAT VNGEDAIPGSWPWQVSLQD----KTG-FHFCGGSLISEDWVVTAAHCGVKT-----SDVV
: *.. :: ::: * * :
sp|O35205|GRAK_MOUSE -LGAHSL-SKNEP-MKQTFEIKKFIPFSRLQSG-----------SASH--DIMLIKLRTA
sp|Q7YRZ7|GRAA_BOVIN -LGAHST-SHKEK-LDQVFSIKKAIPYPCFDPQ-----------TFEG--DLQLLQLEGK
sp|P08884|GRAE_MOUSE -LGAHNI-KAKEE-TQQIIPVAKAIPHPDYNAT-----------AFFS--DIMLLKLESK
sp|Q06606|GRZ2_RAT -LGAHNI-KKQEN-T-QVISVVKAKPHENYDRD-----------SHFN--DIMLLKLERK
sp|P21844|MCPT5_MOUSE -LGAHNK-TSKED-TWQKLEVEKQFLHPKYDEN-----------LVVH--DIMLLKLKEK
sp|P03953|CFAD_MOUSE -LGAHSL-SAPEP-YKRWYDVQSVVPHPGSRPD-----------SLED--DLILFKLSQN
sp|P00773|ELA1_RAT -VGDHNL-SQNDG-TEQYVSVQKIMVHPTWNSN-----------NVAAGYDIALLRLAQS
sp|Q00871|CTRB1_PENVA -LGAHNI-RQNEA-SQVSITSTDFFTHENWNSW-----------LLTN--DIALIRLPSP
sp|P08246|ELNE_HUMAN -LGAHNL-SRREP-TRQVFAVQR-IFENGYDPV-----------NLLN--DIVILQLNGS
sp|P20160|CAP7_HUMAN -LGAYDL-RRRERQSRQTFSISS-MSENGYDPQ-----------QNLN--DLMLLQLDRE
sp|P80015|CAP7_PIG -LGAYDL-RQQEQ-SRQTFSIRS-ISQNGYDPR-----------QNLN--DVLLLQLDRE
sp|Q03238|GRAM_RAT -FGLHSL-HDPQD-PGLTFYIKQAIKHPGYNLK------------YEN--DLALLKLDGR
sp|P00757|KLKB4_MOUSE -LGKNNF-LEDEP-SDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSN--DLMLLRLSKP
sp|Q6H321|KLK2_HORSE -LGRHNL-SEDED-TAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISH--DLMLLRLAQP
sp|Q91VE3|KLK7_MOUSE -LGSDKIG-DQS---AQKIKATKSFRHPGYSTK-----------THVN--DIMLVRLDEP
sp|Q9Y5K2|KLK4_HUMAN -LGLHSLEADQEP-GSQMVEASLSVRHPEYNRP-----------LLAN--DLMLIKLDES
sp|P29786|TRY3_AEDAE -AGS----TDRTN-GGIIVKVKSVIPHPQYNGD-----------TYNY--DFSLLELDES
sp|P35037|TRY3_ANOGA -LGS----SRHAS-GGTVVRVARVLEHPNYDDS-----------TIDY--DFSLMELESE
sp|P07338|CTRB1_RAT VAGEFDQ-GSDEE-NIQVLKIAQVFKNPKFNMF-----------TVRN--DITLLKLATP
* *. :..*
sp|O35205|GRAK_MOUSE AELNKNVQLLHLGSK--NYLRDGTKCQVTGWGTTKPDLLTASDTLREVTVTIISRKRCNS
sp|Q7YRZ7|GRAA_BOVIN ATMTKAVGILQLPRTE-DDVKPHTKCHVAGWGSTKKDACQMSNALREANVTVIDRKICND
sp|P08884|GRAE_MOUSE AKRTKAVRPLKLPRPN-ARVKPGDVCSVAGWGSRSINDTKASARLREAQLVIQEDEECKK
sp|Q06606|GRZ2_RAT AQLNGVVKTIALPRSQ-DWVKPGQVCTVAGWGRLA--NCTSSNTLQEVNLEVQKGQKCQD
sp|P21844|MCPT5_MOUSE AKLTLGVGTLPLSANF-NFIPPGRMCRAVGWGRTNVNE-PASDTLQEVKMRLQEPQACKH
sp|P03953|CFAD_MOUSE ASLGPHVRPLPLQYED-KEVEPGTLCDVAGWGVVTHAG-RRPDVLHQLRVSIMNRTTCNL
sp|P00773|ELA1_RAT VTLNNYVQLAVLPQEG-TILANNNPCYITGWGRTRTNG-QLSQTLQQAYLPSVDYSICSS
sp|Q00871|CTRB1_PENVA VSLNSNIKTVKLPSSD---VSVGTTVTPTGWGRPSDSASGISDVLRQVNVPVMTNADCDS
sp|P08246|ELNE_HUMAN ATINANVQVAQLPAQG-RRLGNGVQCLAMGWGLLGRNR-GIASVLQELNVTVVTS-LCRR
sp|P20160|CAP7_HUMAN ANLTSSVTILPLPLQN-ATVEAGTRCQVAGWGSQRSGG-RLSRFPRFVNVTVTPEDQCRP
sp|P80015|CAP7_PIG ARLTPSVALVPLPPQN-ATVEAGTNCQVAGWGTQRLRR-LFSRFPRVLNVTV-TSNPCLP
sp|Q03238|GRAM_RAT VKPSKNVKPLALPRKPRDKPAEGSRCSTAGWGITHQRG-QLAKSLQELDLRLLDTRMCNN
sp|P00757|KLKB4_MOUSE ADITDVVKPITLPTEE-PK--LGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDK
sp|Q6H321|KLK2_HORSE ARITDAVKILDLPTQE-PK--LGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCAR
sp|Q91VE3|KLK7_MOUSE VKMSSKVEAVQLPEHC-EP--PGTSCTVSGWGTTTSPDVTFPSDLMCSDVKLISSRECKK
sp|Q9Y5K2|KLK4_HUMAN VSESDTIRSISIASQC-PT--AGNSCLVSGWGLLANG--RMPTVLQCVNVSVVSEEVCSK
sp|P29786|TRY3_AEDAE IGFSRSIEAIALPDAS-ETVADGAMCTVSGWGDTKNVF-EMNTLLRAVNVPSYNQAECAA
sp|P35037|TRY3_ANOGA LTFSDVVQPVSLPDQD-EAVEDGTMTIVSGWGNTQSAA-ESNAILRAANVPTVNQKECTI
sp|P07338|CTRB1_RAT AQFSETVSAVCLPNVD-DDFPPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADCKK
: : *** : *
sp|O35205|GRAK_MOUSE QSYYNHKPVITKDMICAGDARGQKDSCKGDSGGPLIC----KGIFHALVSQGY--KCGIA
sp|Q7YRZ7|GRAA_BOVIN AQHYNFNPVIDLSMICAGGRKGEDDSCEGDSGSPLIC----DNVFRGVTSFG---KCGNP
sp|P08884|GRAE_MOUSE R----FRHYTETTEICAGDLKKIKTPFKGDSGGPLVC----DNKAYGLLAYAK----NRT
sp|Q06606|GRZ2_RAT M----SEDYNDSIQLCVGNPSEGKATGKGDSGGPFVC----DGVAQGIVSYRL----CTG
sp|P21844|MCPT5_MOUSE -----FTSFRHNSQLCVGNPKKMQNVYKGDSGGPLLC----AGIAQGIASYVH----RNA
sp|P03953|CFAD_MOUSE RTY--HDGVVTINMMCAES--NRRDTCRGDSGSPLVC----GDAVEGVVTWGSR-VCGNG
sp|P00773|ELA1_RAT SSY--WGSTVKTTMVCAGG-DGVRSGCQGDSGGPLHCLVNGQYSVHGVTSFVSSMGCNVS
sp|Q00871|CTRB1_PENVA V-Y----GIVGDGVVCIDG-TGGKSTCNGDSGGPLNL----NGMTYGITSFGSSAGCE-K
sp|P08246|ELNE_HUMAN SN------------VCTLVRGRQAGVCFGDSGSPLVC----NGLIHGIASFVRGG-CASG
sp|P20160|CAP7_HUMAN NN------------VCTGVLTRRGGICNGDGGTPLVC----EGLAHGVASFSLGP-CGR-
sp|P80015|CAP7_PIG RD------------MCIGVFSRRGRISQGDRGTPLVC----NGLAQGVASFLRRR-FRR-
sp|Q03238|GRAM_RAT SRF--WNGVLTDSMLCLKAGAKGQAPCKGDSGGPLVC---GKGKVDGILSFSSKN-CTDI
sp|P00757|KLKB4_MOUSE A----HEMKVTDAMLCAGEMDGGSYTCEHDSGGPLIC----DGILQGITSWGPEP-CGEP
sp|Q6H321|KLK2_HORSE A----YPEKMTEFVLCATHRDDSGSICLGDSGGALIC----DGVFQGITSWGYSE-CADF
sp|Q91VE3|KLK7_MOUSE V----YKDLLGKTMLCAGIPDSKTNTCNGDSGGPLVC----NDTLQGLVSWGTYP-CGQP
sp|Q9Y5K2|KLK4_HUMAN L----YDPLYHPSMFCAGGGQDQKDSCNGDSGGPLIC----NGYLQGLVSFGKAP-CGQV
sp|P29786|TRY3_AEDAE ALV--NVVPVTEQMICAGYAAGGKDSCQGDSGGPLVS----GDKLVGVVSWGK--GCALP
sp|P35037|TRY3_ANOGA AYS--SSGGITDRMLCAGYKRGGKDACQGDSGGPLVV----DGKLVGVVSWGF--GCAMP
sp|P07338|CTRB1_RAT S----WGSKITDVMTCAGA--SGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGV-CS-T
* * * .: .: :
sp|O35205|GRAK_MOUSE KKPGIYTLLTKKYQTWIKSKLAPSRAH---------------
sp|Q7YRZ7|GRAA_BOVIN QKPGIYILLTKKHLNWIKKTIAGAI-----------------
sp|P08884|GRAE_MOUSE ISSGVFTKIVH-FLPWISRNMKLL------------------
sp|Q06606|GRZ2_RAT TLPRVFTRISS-FIPWIQKTMKVLQQS---------------
sp|P21844|MCPT5_MOUSE KPPAVFTRISH-YRPWINKILREN------------------
sp|P03953|CFAD_MOUSE KKPGVYTRVSS-YRMWIENITNGNMTS---------------
sp|P00773|ELA1_RAT KKPTVFTRVSA-YISWMNNVIAYT------------------
sp|Q00871|CTRB1_PENVA GYPAAFTRVYY-YLDWIQQKTGVTP-----------------
sp|P08246|ELNE_HUMAN LYPDAFAPVAQ-FVNWIDSIIQRSEDNPCPHPRDPDPASRTH
sp|P20160|CAP7_HUMAN -GPDFFTRVAL-FRDWIDGVLNNPGPGPA-------------
sp|P80015|CAP7_PIG -SSGFFTRVAL-FRNWIDSVLNNPP-----------------
sp|Q03238|GRAM_RAT FKPTVATAVAP-YSSWIRKVIGRWSPQPLT------------
sp|P00757|KLKB4_MOUSE TEPSVYTKLIK-FSSWIRETMANNP-----------------
sp|Q6H321|KLK2_HORSE NDNFVFTKVMP-HLKWIKETIEKNS-----------------
sp|Q91VE3|KLK7_MOUSE NDPGVYTQVCK-YKRWVMETMKTHR-----------------
sp|Q9Y5K2|KLK4_HUMAN GVPGVYTNLCK-FTEWIEKTVQAS------------------
sp|P29786|TRY3_AEDAE NLPGVYARVST-VRQWIREVSEV-------------------
sp|P35037|TRY3_ANOGA GYPGVYARVAV-VRDWVRENSGA-------------------
sp|P07338|CTRB1_RAT STPAVYSRVTA-LMPWVQQILEAN------------------
: *:
|