This file is indexed.

/usr/share/perl5/Text/Ngrams.pm is in libtext-ngrams-perl 2.005-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

   1
   2
   3
   4
   5
   6
   7
   8
   9
  10
  11
  12
  13
  14
  15
  16
  17
  18
  19
  20
  21
  22
  23
  24
  25
  26
  27
  28
  29
  30
  31
  32
  33
  34
  35
  36
  37
  38
  39
  40
  41
  42
  43
  44
  45
  46
  47
  48
  49
  50
  51
  52
  53
  54
  55
  56
  57
  58
  59
  60
  61
  62
  63
  64
  65
  66
  67
  68
  69
  70
  71
  72
  73
  74
  75
  76
  77
  78
  79
  80
  81
  82
  83
  84
  85
  86
  87
  88
  89
  90
  91
  92
  93
  94
  95
  96
  97
  98
  99
 100
 101
 102
 103
 104
 105
 106
 107
 108
 109
 110
 111
 112
 113
 114
 115
 116
 117
 118
 119
 120
 121
 122
 123
 124
 125
 126
 127
 128
 129
 130
 131
 132
 133
 134
 135
 136
 137
 138
 139
 140
 141
 142
 143
 144
 145
 146
 147
 148
 149
 150
 151
 152
 153
 154
 155
 156
 157
 158
 159
 160
 161
 162
 163
 164
 165
 166
 167
 168
 169
 170
 171
 172
 173
 174
 175
 176
 177
 178
 179
 180
 181
 182
 183
 184
 185
 186
 187
 188
 189
 190
 191
 192
 193
 194
 195
 196
 197
 198
 199
 200
 201
 202
 203
 204
 205
 206
 207
 208
 209
 210
 211
 212
 213
 214
 215
 216
 217
 218
 219
 220
 221
 222
 223
 224
 225
 226
 227
 228
 229
 230
 231
 232
 233
 234
 235
 236
 237
 238
 239
 240
 241
 242
 243
 244
 245
 246
 247
 248
 249
 250
 251
 252
 253
 254
 255
 256
 257
 258
 259
 260
 261
 262
 263
 264
 265
 266
 267
 268
 269
 270
 271
 272
 273
 274
 275
 276
 277
 278
 279
 280
 281
 282
 283
 284
 285
 286
 287
 288
 289
 290
 291
 292
 293
 294
 295
 296
 297
 298
 299
 300
 301
 302
 303
 304
 305
 306
 307
 308
 309
 310
 311
 312
 313
 314
 315
 316
 317
 318
 319
 320
 321
 322
 323
 324
 325
 326
 327
 328
 329
 330
 331
 332
 333
 334
 335
 336
 337
 338
 339
 340
 341
 342
 343
 344
 345
 346
 347
 348
 349
 350
 351
 352
 353
 354
 355
 356
 357
 358
 359
 360
 361
 362
 363
 364
 365
 366
 367
 368
 369
 370
 371
 372
 373
 374
 375
 376
 377
 378
 379
 380
 381
 382
 383
 384
 385
 386
 387
 388
 389
 390
 391
 392
 393
 394
 395
 396
 397
 398
 399
 400
 401
 402
 403
 404
 405
 406
 407
 408
 409
 410
 411
 412
 413
 414
 415
 416
 417
 418
 419
 420
 421
 422
 423
 424
 425
 426
 427
 428
 429
 430
 431
 432
 433
 434
 435
 436
 437
 438
 439
 440
 441
 442
 443
 444
 445
 446
 447
 448
 449
 450
 451
 452
 453
 454
 455
 456
 457
 458
 459
 460
 461
 462
 463
 464
 465
 466
 467
 468
 469
 470
 471
 472
 473
 474
 475
 476
 477
 478
 479
 480
 481
 482
 483
 484
 485
 486
 487
 488
 489
 490
 491
 492
 493
 494
 495
 496
 497
 498
 499
 500
 501
 502
 503
 504
 505
 506
 507
 508
 509
 510
 511
 512
 513
 514
 515
 516
 517
 518
 519
 520
 521
 522
 523
 524
 525
 526
 527
 528
 529
 530
 531
 532
 533
 534
 535
 536
 537
 538
 539
 540
 541
 542
 543
 544
 545
 546
 547
 548
 549
 550
 551
 552
 553
 554
 555
 556
 557
 558
 559
 560
 561
 562
 563
 564
 565
 566
 567
 568
 569
 570
 571
 572
 573
 574
 575
 576
 577
 578
 579
 580
 581
 582
 583
 584
 585
 586
 587
 588
 589
 590
 591
 592
 593
 594
 595
 596
 597
 598
 599
 600
 601
 602
 603
 604
 605
 606
 607
 608
 609
 610
 611
 612
 613
 614
 615
 616
 617
 618
 619
 620
 621
 622
 623
 624
 625
 626
 627
 628
 629
 630
 631
 632
 633
 634
 635
 636
 637
 638
 639
 640
 641
 642
 643
 644
 645
 646
 647
 648
 649
 650
 651
 652
 653
 654
 655
 656
 657
 658
 659
 660
 661
 662
 663
 664
 665
 666
 667
 668
 669
 670
 671
 672
 673
 674
 675
 676
 677
 678
 679
 680
 681
 682
 683
 684
 685
 686
 687
 688
 689
 690
 691
 692
 693
 694
 695
 696
 697
 698
 699
 700
 701
 702
 703
 704
 705
 706
 707
 708
 709
 710
 711
 712
 713
 714
 715
 716
 717
 718
 719
 720
 721
 722
 723
 724
 725
 726
 727
 728
 729
 730
 731
 732
 733
 734
 735
 736
 737
 738
 739
 740
 741
 742
 743
 744
 745
 746
 747
 748
 749
 750
 751
 752
 753
 754
 755
 756
 757
 758
 759
 760
 761
 762
 763
 764
 765
 766
 767
 768
 769
 770
 771
 772
 773
 774
 775
 776
 777
 778
 779
 780
 781
 782
 783
 784
 785
 786
 787
 788
 789
 790
 791
 792
 793
 794
 795
 796
 797
 798
 799
 800
 801
 802
 803
 804
 805
 806
 807
 808
 809
 810
 811
 812
 813
 814
 815
 816
 817
 818
 819
 820
 821
 822
 823
 824
 825
 826
 827
 828
 829
 830
 831
 832
 833
 834
 835
 836
 837
 838
 839
 840
 841
 842
 843
 844
 845
 846
 847
 848
 849
 850
 851
 852
 853
 854
 855
 856
 857
 858
 859
 860
 861
 862
 863
 864
 865
 866
 867
 868
 869
 870
 871
 872
 873
 874
 875
 876
 877
 878
 879
 880
 881
 882
 883
 884
 885
 886
 887
 888
 889
 890
 891
 892
 893
 894
 895
 896
 897
 898
 899
 900
 901
 902
 903
 904
 905
 906
 907
 908
 909
 910
 911
 912
 913
 914
 915
 916
 917
 918
 919
 920
 921
 922
 923
 924
 925
 926
 927
 928
 929
 930
 931
 932
 933
 934
 935
 936
 937
 938
 939
 940
 941
 942
 943
 944
 945
 946
 947
 948
 949
 950
 951
 952
 953
 954
 955
 956
 957
 958
 959
 960
 961
 962
 963
 964
 965
 966
 967
 968
 969
 970
 971
 972
 973
 974
 975
 976
 977
 978
 979
 980
 981
 982
 983
 984
 985
 986
 987
 988
 989
 990
 991
 992
 993
 994
 995
 996
 997
 998
 999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
# (c) 2003-2013 Vlado Keselj http://web.cs.dal.ca/~vlado
#
# Text::Ngrams - A Perl module for N-grams processing

package Text::Ngrams;

use strict;
require Exporter;
use Carp;
use vars qw($VERSION @ISA @EXPORT @EXPORT_OK %EXPORT_TAGS);
@ISA = qw(Exporter);
%EXPORT_TAGS = ( 'all' => [ qw(new encode_S decode_S) ] );
@EXPORT_OK = ( @{ $EXPORT_TAGS{'all'} } );
@EXPORT = qw(new);
$VERSION = '2.005';

use vars qw($Version $Revision);
$Version = $VERSION;
($Revision = substr(q$Revision: 399 $, 10)) =~ s/\s+$//;

use vars @EXPORT_OK;
use vars qw();			# non-exported package globals go here

sub new {
  my $package = shift;
  $package = ref($package) || $package;
  my $self = {};

  my (%params) = @_;

  $self->{windowsize} = exists($params{windowsize}) ?
      $params{windowsize} : 3;
  die "nonpositive window size: $self->{windowsize}" unless $self->{windowsize} > 0;
  delete($params{windowsize});

  if (! exists($params{type}) or $params{type} eq 'character') {
      $self->{skiprex} = '';
      $self->{tokenrex} = qr/([a-zA-Z]|[^a-zA-Z]+)/;
      $self->{processtoken} =  sub { s/[^a-zA-Z]+/ /; $_ = uc $_ };
      $self->{allow_iproc} = 1;
  }
  elsif ($params{type} eq 'utf8') {
      $self->{skiprex} = '';
      $self->{tokenrex} = qr/([\xF0-\xF4][\x80-\xBF][\x80-\xBF][\x80-\xBF]
                             |[\xE0-\xEF][\x80-\xBF][\x80-\xBF]
                             |[\xC2-\xDF][\x80-\xBF]
                             |[\x00-\xFF])/x;
      $self->{processtoken} = '';
  }
  #MJ ->
  #this type is analogous to the "character" type but defined for utf8 characters
  elsif ($params{type} eq 'utf8_character') {
      #$self->{inputlayer}        
      #input layer to be put on the input stream by the function binmode before reading from a given stream
      #and to be removed by ***binmode HANDLE,":pop"*** after the reading from the particular stream is done
      #has to be a real layer (like ":encoding(utf8)"), not a pseudo layer (like ":utf8")
      #so that the psuedo layer ":pop" is able to remove this input layer 
      
      $self->{inputlayer}=':encoding(utf8)';
      #this will automatically decode input text from utf8 into Perl internal reporesentation of Unicode strings
      #and so the regular expressions for Unicode as well as the uc function can be performed on them
      
     
      $self->{skiprex} = '';
     
      $self->{tokenrex} = qr/(\p{IsAlpha}|\P{IsAlpha}+)/;
                 
      $self->{processtoken} =  sub { s/\P{IsAlpha}+/ /; $_ = uc $_ ; $_=Encode::encode_utf8( $_ );};
      #the last operation ***$_=Encode::encode_utf8( $_ )*** is necessary 
      #to go back to utf8 encoding from the internal Perl representation
      #so that for the output the n-grams are in utf8 (encoded by encode_S though)
      
      $self->{allow_iproc} = 0;
      # allow_iproc has to be 0. Otherwise the last token in the read block will
      # be preprocessed and encoded in utf8,
      # and then attached at the beginning of the next block read from input,
      # which will be in the internal Perl representation
  }
  #MJ <-
  elsif ($params{type} eq 'byte') {
      $self->{skiprex} = '';
      $self->{tokenrex} = '';
      $self->{processtoken} = '';
  }
  elsif ($params{type} eq 'word') {
      $self->{skiprex} = qr/[^a-zA-Z0-9]+/;
      $self->{skipinsert} = ' ';
      $self->{tokenrex} = qr/([a-zA-Z]+|(\d+(\.\d+)?|\d*\.\d+)([eE][-+]?\d+)?)/;
      $self->{processtoken} = sub { s/(\d+(\.\d+)?|\d*\.\d+)([eE][-+]?\d+)?/<NUMBER>/ }
  }
  else { die "unknown type: $params{type}" }
  delete($params{type});

  $self->{'table'} = [ ];
  $self->{'total'} = [ ];
  $self->{'total_distinct_count'} = 0;
  $self->{'lastngram'} = [ ];
  $self->{'next_token_id'} = 0;
  $self->{'token_dict'} = { };
  $self->{'token_S'} = [ ];
  $self->{'token'} = [ ];

  foreach my $i ( 1 .. $self->{windowsize} ) {
      $self->{table}[$i] = { };
      $self->{total}[$i] = 0;
      $self->{firstngram}[$i] = '';
      $self->{lastngram}[$i] = '';
  }

  if (exists($params{'limit'})) {
      die "limit=$params{'limit'}" if $params{'limit'} < 1;
      $self->{'limit'} = $params{'limit'};
  }
  delete($params{'limit'});

  die "unknown parameters:".join(' ', %params) if %params;

  bless($self, $package);
  return $self;
}

sub feed_tokens {
    my $self = shift;
    # count all n-grams sizes starting from max to 1
    foreach my $t1 (@_) {
	my $t = $t1;
	if (defined($self->{token_dict}->{$t})) {
	    $t = $self->{token_dict}->{$t};
	} else {
	    my $id = $self->{next_token_id}++;
	    $self->{token_S}->[$id] = &encode_S($t);
	    $self->{token}->[$id]   = $t;
	    $t = $self->{token_dict}->{$t} = $id;
	}
	for (my $n=$self->{windowsize}; $n > 0; $n--) {
	    if ($n > 1) {
		next unless $self->{lastngram}[$n-1] ne '';
		$self->{lastngram}[$n] = $self->{lastngram}[$n-1] .
		    ' ' . $t;
	    } else { $self->{lastngram}[$n] = $t }

	    if ( ($self->{table}[$n]{$self->{lastngram}[$n]} += 1)==1)
	    { $self->{'total_distinct_count'} += 1 }

	    $self->{'total'}[$n] += 1;
	    if ($self->{'firstngram'}[$n] eq '')
	    { $self->{'firstngram'}[$n] = $self->{lastngram}[$n] }
	}
    }
    if (exists($self->{'limit'}) and
	$self->{'total_distinct_count'} > 2 * $self->{'limit'})
    { $self->_reduce_to_limit }
}

sub process_text {
    my $self = shift;
    $self->_process_text(0, @_);
    if (exists($self->{'limit'})) { $self->_reduce_to_limit }
}    

sub _process_text {
    my $self = shift;
    my $cont = shift; # the minimal number of chars left for
                      # continuation (the new-line problem, and the
                      # problem with too long lines)
                      # The remainder of unprocessed string is
                      # returned.
    if ($cont < 0) { $cont = 0 }

    if (			# type is byte
 	$self->{skiprex}        eq '' and
        $self->{tokenrex}       eq '' and
        $self->{processtoken}   eq '' and
 	$cont == 0
        )
    { return $self->_process_text_byte(@_) }

    my (@tokens);
    my $text;
    while (@_) {
	$text .= shift @_;
	while (length($text) > 0) {
	    my $textl = $text;
	    my $skip = '';
	    if ($self->{skiprex} ne '' && $textl =~ /^$self->{skiprex}/)
	    { $skip = $&; $textl = $'; }
	    if (defined($self->{skipinsert})) {
		$skip = $self->{skipinsert};
		$text = $skip.$textl;
	    }
	    if (length($textl) < $cont) { last }
	    if (length($textl)==0) { $text=$textl; last; }

	    local $_;
	    if ($self->{tokenrex} ne '') {
		if ($textl =~ /^$self->{tokenrex}/)
		{ $_ = $&; $textl = $'; }
	    }
	    else
	    { $_ = substr($textl, 0, 1); $textl = substr($textl, 1) }
	    last if $_ eq '';

	    if (length($textl) < $cont) {
		if (defined($self->{allow_iproc}) && $self->{allow_iproc}
		    && ref($self->{processtoken}) eq 'CODE')
		{ &{$self->{processtoken}} }
		$text = $skip.$_.$textl;
		last;
	    }
	    if (ref($self->{processtoken}) eq 'CODE')
	    { &{$self->{processtoken}} }
	    push @tokens, $_;
	    $text = $textl;
	}
    }
    $self->feed_tokens(@tokens);
    return $text;
}

sub _process_text_byte {
    my $self = shift;

    for (my $i=0; $i<=$#_; ++$i) {
	my @a = split('', $_[$i]);
	next if $#a==-1;
	$self->feed_tokens( @a );
    }
    return '';
}

sub process_files {
    my $self = shift;

    #MJ ->
    my $input_layer='';
    if (defined($self->{inputlayer})) {$input_layer=$self->{inputlayer};}
    #MJ <-

    foreach my $f (@_) {
	my $f1;
	local *F;
	if (not ref($f))
	{ open(F, "$f") or die "cannot open $f:$!"; $f1 = *F }
	else { $f1 = $f }

	#MJ ->
	#put the encoding layer on the input when requested
	if ($input_layer ne '') {
		binmode $f1, $input_layer;
	}
	#MJ <-

	my ($text, $text_l, $cont) = ('', 0, 1);
	if (			# type is byte
 	    $self->{skiprex}        eq '' and
            $self->{tokenrex}       eq '' and
            $self->{processtoken}   eq ''
           )
 	{ $cont = 0 }

	while (1) {
	    $text_l = length($text);
	    read($f1, $text, 1024, length($text));
	    last if length($text) <= $text_l;
	    $text = $self->_process_text($cont, $text);
	}
	$text = $self->_process_text(0, $text);

	#MJ ->
	#remove the encoding layer from the input stream if it was added
	#Caution: here is what the Perl documentation says about the pseudo layer ":pop"
	#"Should be considered as experimental. (...) A more elegant (and safer) interface is needed."
	if ($input_layer ne '') {
		binmode $f1,":pop";   
	}
	#MJ <-

	close($f1) if not ref($f);
	if (exists($self->{'limit'})) { $self->_reduce_to_limit }
    }
}

sub _reduce_to_limit {
    my $self = shift;
    return unless exists($self->{'limit'}) and
	$self->{'limit'} > 0;

    while ($self->{'total_distinct_count'} > $self->{'limit'}) {
	my $nextprunefrequency = 0;
	for (my $prunefrequency=1;; $prunefrequency = $nextprunefrequency) {
	    $nextprunefrequency = $self->{'total'}[1];

	    foreach my $n (1 .. $self->{'windowsize'}) {

		my @keys = keys(%{$self->{table}[$n]});
		foreach my $ngram (@keys) {
		    my $f = $self->{table}[$n]{$ngram};
		    if ($f <= $prunefrequency) {
			delete $self->{'table'}[$n]{$ngram};
			$self->{'total'}[$n] -= $prunefrequency;
			$self->{'total_distinct_count'} -= 1;
		    }
		    elsif ($nextprunefrequency > $f)
		    { $nextprunefrequency = $f }
		}

		return if $self->{'total_distinct_count'} <= $self->{'limit'};
		die if $nextprunefrequency <= $prunefrequency;
}   }   }   }

# Sorts keys according to the lexicographic order.
sub _keys_sorted {
    my $self = shift;
    my $n = shift;
    my @k = keys(%{$self->{table}[$n]});
    my %k1 = ();
    foreach my $k (@k) {
	$k1{
	    join (' ', map { $self->{token}->[$_] } split(/ /, $k) )
	    } = $k;
    }
    @k = ();
    foreach my $k (sort(keys(%k1))) {
	push @k, $k1{$k};
    }
    return @k;
}

sub get_ngrams {
    my $self = shift;
    my (%params) = @_;
    my $n = exists($params{'n'})? $params{'n'} : $self->{windowsize};
    my $onlyfirst = exists($params{'onlyfirst'}) ? $params{'onlyfirst'} : '';
    my $opt_normalize = exists($params{'normalize'}) ?$params{'normalize'} : '';

    my $total = $self->{total}[$n]; my @keys = ();
    if (!exists($params{'orderby'}) or $params{'orderby'} eq 'ngram') {
      @keys = $self->_keys_sorted($n);
    } elsif ($params{'orderby'} eq 'none') {
      die "onlyfirst requires order" if $onlyfirst;
      @keys = keys(%{$self->{table}[$n]})
    }
    elsif ($params{'orderby'} eq 'frequency') {
      @keys = $self->_keys_sorted($n);
      my %keysord = ();
      for (my $i=0; $i<=$#keys; ++$i) { $keysord{$keys[$i]} = $i }
      @keys = sort { $self->{table}[$n]{$b} <=> $self->{table}[$n]{$a}
		   or $keysord{$a} <=> $keysord{$b} }
	keys(%{$self->{table}[$n]});
    }
    else { die }

    @keys = splice(@keys,0,$onlyfirst) if $onlyfirst;

    my @ret;
    foreach my $ngram (@keys) {
        my $count = $self->{table}[$n]{$ngram};
        $count = ($opt_normalize ? ($count / $total ) : $count);
	push @ret, $self->_encode_S($ngram), $count;
    }

    return @ret;
}

sub to_string {
    my $self = shift;
    my (%params) = @_;
    my $n = exists($params{'n'})? $params{'n'} : $self->{windowsize};
    my $onlyfirst = exists($params{'onlyfirst'}) ? $params{'onlyfirst'} : '';
    my $opt_normalize = exists($params{'normalize'}) ?$params{'normalize'} : '';
   
    #my $onlyfirst = exists($params{'onlyfirst'}) ?
    #$params{'onlyfirst'} : '';
    #delete $params{'onlyfirst'};

    my $out =  exists($params{'out'}) ? $params{'out'} : '';
    delete $params{'out'};
    my $outh = $out;
    if ($out and (not ref($out))) {
	local *FH; open(FH, ">$out") or die "cannot open $out:$!";
        $outh = *FH;
    }

    #my $opt_normalize = $params{'normalize'};
    #delete $params{'normalize'};

    my $spartan = $params{'spartan'};
    delete $params{'spartan'};

    my $ret='';
    $ret = "BEGIN OUTPUT BY Text::Ngrams version $VERSION\n\n" unless $spartan;

    foreach my $n (1 .. $self->{windowsize}) {
	if ($spartan and $n < $self->{windowsize}) { next }
	if (! $spartan ) {
	    my $tmp = "$n-GRAMS (total count: $self->{total}[$n])";
	    $ret .= "$tmp\n" .
		"FIRST N-GRAM: ".  $self->_encode_S($self->{firstngram}[$n]).
		"\n LAST N-GRAM: ".$self->_encode_S($self->{lastngram}[$n])."\n".
		('-' x length($tmp)) . "\n";
        }
	my $total = $self->{total}[$n];

	my @keys;
	if (!exists($params{'orderby'}) or $params{'orderby'} eq 'ngram')
	{ @keys = $self->_keys_sorted($n) }
	elsif ($params{'orderby'} eq 'none') {
	    die "onlyfirst requires order" if $onlyfirst;
	    @keys = keys(%{$self->{table}[$n]})
	    }
	elsif ($params{'orderby'} eq 'frequency') {
	    @keys = sort { $self->{table}[$n]{$b} <=>
			   $self->{table}[$n]{$a} }
	            keys(%{$self->{table}[$n]});
	}
	else { die }

	@keys = splice(@keys,0,$onlyfirst) if $onlyfirst;

	my %params1=%params; $params1{n}=$n;
	my @a = $self->get_ngrams(%params1);
	for (my $i=0; $i<=$#a; $i+=2) {
	  my $ng = $a[$i]; my $f = $a[$i+1];
	  $ret.="$ng\t$f\n";
	}
	if ($out) { print $outh $ret; $ret = '' }

	$ret .= "\n" unless $spartan;
    }

    $ret .= "END OUTPUT BY Text::Ngrams\n" unless $spartan;

    if ($out) {
	print $outh $ret; $ret = '';
	close($outh) if not ref($out);
    }

    return $ret;
}

# http://web.cs.dal.ca/~vlado/srcperl/snip/decode_S
sub decode_S ( $ ) {
    local $_ = shift;
    my $out;

    while (length($_) > 0) {
        if (/^\\(\S)/) {
            $_ = $'; my $tmp = $1;
            $tmp =~ tr/0-5Aabtnvfroil6-9NSTcEseFGRUd/\x00-\x1F\x7F/;
            $out .= $tmp;
        }
        elsif (/^\^_/) { $_ = $'; $out .= "\240" }
        elsif (/^\^(\S)/) { $_ = $'; $out .= pack('C',ord($1)+128); }
        elsif (/^\`(\S)/) {
            $_ = $'; my $tmp = $1;
            $tmp =~ tr/0-5Aabtnvfroil6-9NSTcEseFGRUd/\x00-\x1F\x7F/;
            $out .= pack('C', ord($tmp)+128);
        }
        elsif (/^_+/) { $_ = $'; my $tmp = $&; $tmp =~ tr/_/ /; $out .= $tmp; }
        elsif (/^[^\\^\`\s_]+/) { $_ = $'; $out .= $&; }
        else { die "decode_S unexpected:$_" }
    }

    return $out;
}

sub _encode_S {
    my $self = shift;
    my @r = ();
    while (@_) {
	push @r,
	map { $self->{token_S}->[$_] } split(/ /, shift @_);
    }
    return join(' ', @r);
}

# http://www.cs.dal.ca/~vlado/srcperl/snip/encode_S
sub encode_S( $ ) {
    local $_ = shift;

    s/=/=0/g;    # first hide a special character (=)
    s/\\/=b/g;			# encode backslashes

    s/([\x80-\xFF])/=x$1/g; # replace >127 with 127
    tr/\x80-\xFF/\x00-\x7F/;
    s/=x=/=X/g;			# hide again =

    s/([\x00-\x1F\x5C\x5E-\x60\x7F])/=B$1/g;
    tr/\x20\x00-\x1F\x7F/_0-5Aabtnvfroil6-9NSTcEseFGRUd/;

    s/=x=B(\S)/`$1/g;		# hex backslash
    s/=x(\S)/^$1/g;		# hex other
    s/=B(\S)/\\$1/g;		# backslashed
    s/=b/\\\\/g;		# original backslashes
    s/=X/^=0/g;
    s/=0/=/g;			# put back =

    return $_;
}

1;
__END__

=head1 NAME

Text::Ngrams - Flexible Ngram analysis (for characters, words, and more)

=head1 SYNOPSIS

For default character n-gram analysis of string:

  use Text::Ngrams;
  my $ng3 = Text::Ngrams->new;
  $ng3->process_text('abcdefg1235678hijklmnop');
  print $ng3->to_string;
  my @ngramsarray = $ng3->get_ngrams;

One can also feed tokens manually:

  use Text::Ngrams;
  my $ng3 = Text::Ngrams->new;
  $ng3->feed_tokens('a');
  $ng3->feed_tokens('b');
  $ng3->feed_tokens('c');
  $ng3->feed_tokens('d');
  $ng3->feed_tokens('e');
  $ng3->feed_tokens('f');
  $ng3->feed_tokens('g');
  $ng3->feed_tokens('h');

We can choose n-grams of various sizes, e.g.:

  my $ng = Text::Ngrams->new( windowsize => 6 );

or different types of n-grams, e.g.:

  my $ng = Text::Ngrams->new( type => byte );
  my $ng = Text::Ngrams->new( type => word );
  my $ng = Text::Ngrams->new( type => utf8 );

To process a list of files:

  $ng->process_files('somefile.txt', 'otherfile.txt');

To read the standard input or another file handle:

  $ng->process_files(\*STDIN);

To read a file named file.txt and create a profile file file.profile
of 100 most frequent, normalized byte tri-grams:

  use Text::Ngrams;
  my $ng = Text::Ngrams->new( windowsize => 3, type => byte );
  $ng->process_files("file.txt");
  $ng->to_string( orderby=>'frequency', onlyfirst=>100,
                out => "file.profile", normalize=>1,
                spartan=>1);

=head1 DESCRIPTION

This module implement text n-gram analysis, supporting several types of
analysis, including character and word n-grams.

The module Text::Ngrams is very flexible.  For example, it allows a user
to manually feed a sequence of any tokens.  It handles several types of tokens
(character, word), and also allows a lot of flexibility in automatic
recognition and feed of tokens and the way they are combined in an n-gram.
It counts all n-gram frequencies up to the maximal specified length.
The output format is meant to be pretty much human-readable, while also
loadable by the module.

The module can be used from the command line through the script
C<ngrams.pl> provided with the package.

=head1 OUTPUT FORMAT

The output looks like this (version number may be different):

  BEGIN OUTPUT BY Text::Ngrams version 2.004

  1-GRAMS (total count: 8)
  ------------------------
  a	1
  b	1
  c	1
  d	1
  e	1
  f	1
  g	1
  h	1

  2-GRAMS (total count: 7)
  ------------------------
  ab	1
  bc	1
  cd	1
  de	1
  ef	1
  fg	1
  gh	1

  3-GRAMS (total count: 6)
  ------------------------
  abc	1
  bcd	1
  cde	1
  def	1
  efg	1
  fgh	1

  END OUTPUT BY Text::Ngrams

N-grams are encoded using encode_S
(F<web.cs.dal.ca/~vlado/srcperl/snip/encode_S>), so that they can
always be recognized as \S+.  This encoding does not change strings
"too much", e.g., letters, digits, and most punctuation characters
will remail unchanged, and space is replaced by underscore (_).
However, all bytes (even with code greater than 127) are encoded in
unambiguous and relatively compact way.  Two functions, encode_S and
decode_S, are provided for translating arbitrary string into this form
and vice versa.

An example of word n-grams containing space:

  BEGIN OUTPUT BY Text::Ngrams version 2.004

  1-GRAMS (total count: 8)
  ------------------------
  The	1
  brown	3
  fox	3
  quick	1

  2-GRAMS (total count: 7)
  ------------------------
  The_brown	1
  brown_fox	2
  brown_quick	1
  fox_brown	2
  quick_fox	1

  END OUTPUT BY Text::Ngrams

Or, in case of byte type of processing:

  BEGIN OUTPUT BY Text::Ngrams version 2.004

  1-GRAMS (total count: 55)
  -------------------------
  \t	3
  \n	3
  _	12
  ,	2
  .	3
  T	1
  b	3
  c	1
  ... etc

  2-GRAMS (total count: 54)
  -------------------------
  \t_	1
  \tT	1
  \tb	1
  \n\t	2
  __	5
  _.	1
  _b	2
  _f	3
  _q	1
  ,\n	2
  .\n	1
  ..	2
  Th	1
  br	3
  ck	1
  e_	1
  ... etc

  END OUTPUT BY Text::Ngrams

=head1 METHODS

=head2 new ( windowsize => POS_INTEGER, type => 'character' | 'byte' | 'word' | 'utf8' | 'utf8_character', limit => POS_INTEGER )

  my $ng = Text::Ngrams->new;
  my $ng = Text::Ngrams->new( windowsize=>10 );
  my $ng = Text::Ngrams->new( type=>'word' );
  my $ng = Text::Ngrams->new( limit=>10000 );
  and similar.

Creates a new C<Text::Ngrams> object and returns it.
Parameters:

=over 4

=item limit

Limit the number of distinct n-grams collected during processing.  Processing large files may be
slow, so you can limit the total number of distinct n-grams which are
counted to speed up processing.  The speed-up is implemented by periodically prunning the
collected n-gram.  Due to this process, the final n-gram counts may not be correct, and
the list of final most frequen n-grams may not be correct either.

B<BEWARE:> If a limit is set, the n-gram counts at the end may not be
correct due to periodical pruning of n-grams.

=item windowsize

n-gram size (i.e., `n' itself).  Default is 3
if not given.  It is stored in $object->{windowsize}.

=item type

Specifies a predefined type of n-grams:

=over 4

=item character (default)

Default character n-grams:
Read letters, sequences of all other characters are replaced
by a space, letters are turned uppercase.

=item byte

Raw character n-grams:
Don't ignore any bytes and don't pre-process them.

=item utf8

UTF8 characters: Variable length encoding.

=item word

Default word n-grams:
One token is a word consisting of letters, digits and decimal digit
are replaced by <NUMBER>, and everything else is ignored.  A space is inserted
when n-grams are formed.       

=item utf8_character

UTF8 analogue of the "character" type: from a UTF8 encoded text reads letters,
sequences of all other characters are replaced by a space, letters are turned uppercase 

=back

One can also modify type, creating its own type, by fine-tuning several parameters
(they can be undefined):

$o->{skiprex} - regular expression for ignoring stuff between tokens.

$o->{skipinsert} - string to replace a skiprex match that makes
    string too short (efficiency issue)

$o->{tokenrex} - regular expression for recognizing a token.  If it is
empty, it means chopping off one character.

$o->{processtoken} - routine for token preprocessing.  Token is given and returned in $_.

$o->{allow_iproc} - boolean, if set to true (1) allows for incomplete
    tokens to be preprocessed and put back (efficiency motivation)

$o->{inputlayer} - input layer to be put on the input stream by the function binmode 
    before reading from a given stream and to be removed by ***binmode HANDLE,":pop"*** 
    after the reading from the particular stream is done.
    Has to be a real layer (like ":encoding(utf8)"), not a pseudo layer (like ":utf8")
    so that the psuedo layer ":pop" is able to remove this input layer 

For example, the types character, byte, and word are defined in the
foolowing way:

  if ($params{type} eq 'character') {
      $self->{skiprex} = '';
      $self->{tokenrex} = qr/([a-zA-Z]|[^a-zA-Z]+)/;
      $self->{processtoken} =  sub { s/[^a-zA-Z]+/ /; $_ = uc $_ }
      $self->{allow_iproc} = 1;
  }
  elsif ($params{type} eq 'byte') {
      $self->{skiprex} = '';
      $self->{tokenrex} = '';
      $self->{processtoken} = '';
  }
  elsif ($params{type} eq 'utf8') {
      $self->{skiprex} = '';
      $self->{tokenrex} =
           qr/([\xF0-\xF4][\x80-\xBF][\x80-\xBF][\x80-\xBF]
              |[\xE0-\xEF][\x80-\xBF][\x80-\xBF]
              |[\xC2-\xDF][\x80-\xBF]
              |[\x00-\xFF])/x;
      $self->{processtoken} = '';
  }
  elsif ($params{type} eq 'word') {
      $self->{skiprex} = qr/[^a-zA-Z0-9]+/;
      $self->{skipinsert} = ' ';
      $self->{tokenrex} =
        qr/([a-zA-Z]+|(\d+(\.\d+)?|\d*\.\d+)([eE][-+]?\d+)?)/;
      $self->{processtoken} = sub
        { s/(\d+(\.\d+)?|\d*\.\d+)([eE][-+]?\d+)?/<NUMBER>/ }
  }

=back

=head2 feed_tokens ( list of tokens )

  $ng3->feed_tokens('a');

This function manually supplies tokens.

=head2 process_text ( list of strings )

  $ng3->process_text('abcdefg1235678hijklmnop');
  $ng->process_text('The brown quick fox, brown fox, brown fox ...');

Process text, i.e., break each string into tokens and feed them.

=head2 process_files ( file_names or file_handle_references)

  $ng->process_files('somefile.txt');

Process files, similarly to text.
The files are processed line by line, so there should not be any
multi-line tokens.

=head2 get_ngrams ( n => NUMBER, orderby => 'ngram|frequency|none', onlyfirst => NUMBER, out => filename|handle,normalize=>1)

Returns an array of requested n-grams and their friequencies in order
(ngram1, f1, ngram2, f2, ...).  The use of parameters is identical to
the function C<to_string>, except that the option 'spartan' is not applicable to C<get_ngrams> function.

Parameters:

=over 4

=item C<n>

The parameter C<n> specifies the size of n-grams being retrieved.  The default value
is the C<windowsize> field.  It should be less or equal than C<windowsize>.

=back

=head2 to_string ( orderby => 'ngram|frequency|none', onlyfirst => NUMBER, out => filename|handle, normalize => 1, spartan => 1 )

Some examples:

  print $ng3->to_string;
  print $ng->to_string( orderby=>'frequency' );
  print $ng->to_string( orderby=>'frequency', onlyfirst=>10000 );
  print $ng->to_string( orderby=>'frequency', onlyfirst=>10000,
                        normalize=>1 );

Produce string representation of the n-gram tables.

Parameters:

=over 4

=item C<orderby>

The parameter C<orderby> specifies the order of n-grams.  The default
value is 'ngram'.

=item C<onlyfirst>

The parameter C<onlyfirst> causes printing only this many first n-grams
for each n.  It is incompatible with C<orderby=>'none'>.

=item C<out>

The method C<to_string> produces n-gram tables.  However, if those
tables are large and we know that we will write them to a file
right after processing, it may save memory and time to provide the
parameter C<out>, which is a filename or reference to a file handle.
(Experiments on my machine do not show significant improvement nor degradation.)
Filename will be opened and closed, while the file handle will not.

=item C<normalize>

This is a boolean parameter.  By default, it is false (''), in which
case n-gram counts are produced.  If it is true (e.g., 1), the output
will contain normalized frequencies; i.e., n-gram counts divided by
the total number of n-grams of the same size.

=item C<spartan>

This is a boolean parameter.  By default, it is false (''), in which
case n-grams for n=1 up to the maximal value are printed.  If it is
true, only a list of the most frequent n-grams with the maximal length
is printed.

=back

=head2 encode_S ( string )

This function translates any string in a /^\S*$/ compliant representation.
It is primarely used in n-grams string representation to prevent white-space
characters to invalidate the output format.  A usage example is:

  $e = Text::Ngrams::encode_S( $s );

or simply

  $e = encode_S($s);

if encode_S is imported.  Encodes arbitrary string into an \S* form.

See F<http://web.cs.dal.ca/~vlado/srcperl/snip/encode_S> for detailed
explanation.

=head2 decode_S ( string )

This is the inverse funcation of C<encode_S>.  A usage example is:

  $e = Text::Ngrams::decode_S( $s );

or simply

  $e = decode_S($s);

if decode_S is imported.  Decodes a string encoded in the \S* form.

See F<http://www.cs.dal.ca/~vlado/srcperl/snip/encode_S> for detailed
explanation.

=head1 PERFORMANCE

The preformance can vary a lot depending on the type of file, in
particular on the content entropy.  For example a file in English is
processed faster than a file in Chinese, due to a larger number of
distinct n-grams.

The following tests are preformed on a Pentium-III 550MHz, 512MB
memory, Linux Red Hat 6 platform.  (See C<ngrams.pl> - the script is
included in this package.)

  ngrams.pl --n=10 --type=byte 1Mfile

The 1Mfile is a 1MB file of Chinese text.  The program spent
consistently 20 sec per 100KB, giving 200 seconds (3min and 20sec) for
the whole file.  However, after 4 minutes I gave up on waiting for
n-grams to be printed.  The bottleneck seems to be encode_S function,
so after:

  ngrams.pl -n=10 --type=byte --orderby=frequency --onlyfirst=5000
            1Mfile

it took about 3:24 + 5 =~ 9 minutes to print.  After changing
C<ngrams.pl> so that it provides parameter C<out> to C<to_string> in
module C<Ngrams.pm> (see Text::Ngrams), it still took:
3:09+1:28+4:40=9.17.

=head1 LIMITATIONS

The method C<process_file> does not handle multi-line tokens by default.
This can be fixed, but it does not seem to be worth the code
complication.  There are various ways around this if one really needs
such tokens:  One way is to preprocess them.  Another way is to read
as much text as necessary at a time then to use C<process_text>, which
does handle multi-line tokens.

=head1 THANKS

I would like to thank cpan-testers, Jost Kriege, Shlomo Yona, David
Allen (for localizing and reporting and efficiency issue with ngram
prunning), Andrija, Roger Zhang, Jeremy Moses, Kevin J. Ziese, Hassen
Bouzgou, Michael Ricie, and Jingyi Yang for bug reports and comments.

Thanks to Chris Jordan for providing initial implementation of the
function get_strings (2005).

Thanks to Magdalenda Jankowska for implementing a new ngrams type
utf8_character, which is very useful in processing non-English text;
and for a bug fix.

I will be grateful for comments, bug reports, or just letting me know
that you used the module.

=head1 AUTHOR

Author:

 2003-2013 Vlado Keselj http://web.cs.dal.ca/~vlado

Contributors:

      2005 Chris Jordan (contributed initial get_ngrams method)
      2012 Magdalena Jankowska (utf8_character ngrams type)

This module is provided "as is" without expressed or implied warranty.
This is free software; you can redistribute it and/or modify it under
the same terms as Perl itself.

The latest version can be found at F<http://web.cs.dal.ca/~vlado/srcperl/>.

=head1 HISTORY

This code originated in my "monkeys and rhinos" project in 2000, and
is related to authorship attribution project.  After our papers on authorship
attribution it was reformatted as a Perl module in 2003.

=head1 SEE ALSO

Some of the similar projects and related resources are the following:

=over 4

=item Ngram Statistics Package in Perl, by T. Pedersen at al. 

This is a package that includes a script for word n-grams.

=item Text::Ngram Perl Package by Simon Cozens

This is another CPAN package similar to Text::Ngrams for character n-grams.
As an XS implementation it is supposed to be very efficient.

=item Perl script ngram.pl by Jarkko Hietaniemi

This is a script for analyzing character n-grams.

=item Waterloo Statistical N-Gram Language Modeling Toolkit, in C++ by Fuchun Peng 

A n-gram language modeling package written in C++.

=item CPAN N-gram module comparison article by Ben Bullock.

The page is available
  at F<http://www.lemoda.net/perl/cpan-n-gram-modules/> gives an interesting list of
  modules, although the review seem to be superficial and only partially correct.
  The following modules are listed in this review:
  Algorithm::NGram, IDS::Algorithm::Ngram, Lingua::EN::Bigram, Linuga::EN::Ngram,
  Lingua::Gram, Lingua::Identify, Text::Mining::Algorithm::Ngram,
  Text::Ngram, Text::Ngram::LanguageDetermine, Text::Ngramize, Ntext::Ngrams, and
  Text::Positional::Ngram.

=back

Some links to these resources should be available at F<http://web.cs.dal.ca/~vlado/nlp>.

=cut
# $Id: Ngrams.pm 399 2013-02-17 16:01:35Z vlado $