/usr/share/anjuta/templates/anjuta-plugin/configure.ac.tpl is in anjuta-common 2:3.10.2-0ubuntu2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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dnl Process this file with autoconf to produce a configure script.
dnl Created by Anjuta application wizard.
AC_INIT([+NameHLower+], [+Version+])
AM_CONFIG_HEADER(config.h)
AM_INIT_AUTOMAKE([1.11])
AC_PROG_CC
[+IF (=(get "HaveLangCPP") "1")+]
AC_PROG_CPP
AC_PROG_CXX
[+ENDIF+]
[+IF (=(get "HaveI18n") "1")+]
dnl ***************************************************************************
dnl Internationalization
dnl ***************************************************************************
IT_PROG_INTLTOOL([0.35.0])
GETTEXT_PACKAGE=[+NameHLower+]
AC_SUBST(GETTEXT_PACKAGE)
AC_DEFINE_UNQUOTED(GETTEXT_PACKAGE,"$GETTEXT_PACKAGE", [GETTEXT package name])
AM_GLIB_GNU_GETTEXT
[+ENDIF+]
[+IF (=(get "HaveSharedlib") "1")+]
LT_INIT
[+ENDIF+]
PKG_CHECK_MODULES(LIBANJUTA, [libanjuta-3.0])
[+IF (=(get "HavePackage") "1")+]
PKG_CHECK_MODULES([+NameCUpper+], [[+PackageModule1+] [+PackageModule2+]])
AC_SUBST([+NameCUpper+]_CFLAGS)
AC_SUBST([+NameCUpper+]_LIBS)
[+ENDIF+]
dnl Setup Plugin directories
dnl ------------------------
anjutalibdir=`pkg-config --variable=libdir libanjuta-3.0`
anjutadatadir=`pkg-config --variable=datadir libanjuta-3.0`
AC_SUBST(anjutalibdir)
AC_SUBST(anjutadatadir)
anjuta_plugin_dir='$(anjutalibdir)/anjuta'
anjuta_data_dir='$(anjutadatadir)/anjuta'
anjuta_ui_dir='$(anjutadatadir)/anjuta/ui'
anjuta_glade_dir='$(anjutadatadir)/anjuta/glade'
anjuta_image_dir='$(anjutadatadir)/pixmaps/anjuta'
AC_SUBST(anjuta_plugin_dir)
AC_SUBST(anjuta_data_dir)
AC_SUBST(anjuta_ui_dir)
AC_SUBST(anjuta_glade_dir)
AC_SUBST(anjuta_image_dir)
[+IF (=(get "HaveGtkDoc") "1")+]
GTK_DOC_CHECK([1.0])
[+ENDIF+]
AC_OUTPUT([
Makefile
src/Makefile
[+IF (=(get "HaveI18n") "1")+]po/Makefile.in[+ENDIF+]
])
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