This file is indexed.

/usr/lib/R/site-library/Hmisc/INDEX is in r-cran-hmisc 3.9-0-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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abs.error.pred          Indexes of Absolute Prediction Error for Linear
                        Models
all.is.numeric          Check if All Elements in Character Vector are
                        Numeric
approxExtrap            Linear Extrapolation
aregImpute              Multiple Imputation using Additive Regression,
                        Bootstrapping, and Predictive Mean Matching
binconf                 Confidence Intervals for Binomial Probabilities
bootkm                  Bootstrap Kaplan-Meier Estimates
bpower                  Power and Sample Size for Two-Sample Binomial
                        Test
bpplot                  Box-percentile plots
bystats                 Statistics by Categories
ciapower                Power of Interaction Test for Exponential
                        Survival
confbar                 Miscellaneous Functions
contents                Metadata for a Data Frame
cpower                  Power of Cox/log-rank Two-Sample Test
Cs                      Character strings from unquoted names
csv.get                 Read Comma-Separated Text Data Files
cut2                    Cut a Numeric Variable into Intervals
data.frame.create.modify.check
                        Tips for Creating, Modifying, and Checking Data
                        Frames
dataRep                 Representativeness of Observations in a Data
                        Set
deff                    Design Effect and Intra-cluster Correlation
describe                Concise Statistical Description of a Vector,
                        Matrix, Data Frame, or Formula
dotchart2               Enhanced Dot Chart
dropUnusedLevels        Create Temporary Factor Subsetting Function
ecdf                    Empirical Cumulative Distribution Plot
eip                     Edit In Place
errbar                  Plot Error Bars
event.chart             Flexible Event Chart for Time-to-Event Data
event.history           Produces event.history graph for survival data
find.matches            Find Close Matches
first.word              First Word in a String or Expression
format.df               Format a Data Frame or Matrix for LaTeX or HTML
gbayes                  Gaussian Bayesian Posterior and Predictive
                        Distributions
getHdata                Download and Install Datasets for Hmisc,
                        Design, and Statistical Modeling
getZip                  Open a Zip File From a URL.
hdquantile              Harrell-Davis Distribution-Free Quantile
                        Estimator
histbackback            Back to Back Histograms
hist.data.frame         Histograms for Variables in a Data Frame
hoeffd                  Matrix of Hoeffding's D Statistics
html                    Convert an S object to HTML
impute                  Generic Functions and Methods for Imputation
labcurve                Label Curves, Make Keys, and Interactively Draw
                        Points and Curves
label                   Label Attribute of an Object
Lag                     Lag a Numeric, Character, or Factor Vector
latex                   Convert an S object to LaTeX, and Related
                        Utilities
ldBands                 Group Sequential Boundaries using the
                        Lan-DeMets Approach
list.tree               Pretty-print the Structure of a Data Object
makeNstr                makeNstr
mApply                  Apply a Function to Rows of a Matrix or Vector
mgp.axis                Draw Axes With Side-Specific mgp Parameters
minor.tick              Minor Tick Marks
mtitle                  Margin Titles
na.delete               Row-wise Deletion na.action
na.detail.response      Detailed Response Variable Information
na.keep                 Do-nothing na.action
%nin%                   Find Matching (or Non-Matching) Elements
Overview                Overview of Hmisc Library
panel.bpplot            Box-Percentile Panel Function for Trellis
pc1                     First Principal Component
plotCorrPrecision       Plot Precision of Estimate of Pearson
                        Correlation Coefficient
plsmo                   Plot smoothed estimates
popower                 Power and Sample Size for Ordinal Response
print.char.matrix       Function to print a matrix with stacked cells
prn                     Print and Object with its Name
ps.slide                Postscript and Adobe PDF Setup for 35mm Slides
                        and Other Formats
pstamp                  Date/Time/Directory Stamp the Current Plot
rcorr                   Matrix of Correlations and Generalized Spearman
                        Rank Correlation
rcorr.cens              Rank Correlation for Censored Data
rcorrp.cens             Rank Correlation for Paired Predictors with a
                        Censored Response
rcspline.eval           Restricted Cubic Spline Design Matrix
rcspline.plot           Plot Restricted Cubic Spline Function
rcspline.restate        Re-state Restricted Cubic Spline Function
reShape                 Reshape Matrices and Serial Data
rlegend                 Special Version of legend for R
rm.boot                 Bootstrap Repeated Measurements Model
rMultinom               Generate Multinomial Random Variables with
                        Varying Probabilities
samplesize.bin          Sample Size for 2-sample Binomial
sas.get                 Convert a SAS Dataset to an S Data Frame
sasxport.get            Enhanced Importing of SAS Transport Files using
                        read.xport
Save                    Faciliate Use of save and load to Remote
                        Directories
scat1d                  One-Dimensional Scatter Diagram, Spike
                        Histogram, or Density
score.binary            Score a Series of Binary Variables
sedit                   Character String Editing and Miscellaneous
                        Character Handling Functions
show.pch                Display Colors, Plotting Symbols, and Symbol
                        Numeric Equivalents
smean.sd                Compute Summary Statistics on a Vector
solvet                  solve Function with tol argument
somers2                 Somers' Dxy Rank Correlation
spower                  Simulate Power of 2-Sample Test for Survival
                        under Complex Conditions
spss.get                Enhanced Importing of SPSS Files
src                     Source a File from the Current Working
                        Directory
stata.get               Enhanced Importing of STATA Files
store                   Store an Object Permanently
summarize               Summarize Scalars or Matrices by
                        Cross-Classification
summary.formula         Summarize Data for Making Tables and Plots
symbol.freq             Graphic Representation of a Frequency Table
sys                     Run Unix or Dos Depending on System
transace                Additive Regression and Transformations using
                        ace or avas
transcan                Transformations/Imputations using Canonical
                        Variates
translate               Translate Vector or Matrix of Text Strings
t.test.cluster          t-test for Clustered Data
units                   Units Attribute of a Vector
upData                  Update a Data Frame or Cleanup a Data Frame
                        after Importing
valueTags               Store Discriptive Information About an Object
varclus                 Variable Clustering
wtd.mean                Weighted Statistical Estimates
xy.group                Mean x vs. function of y in groups of x
xYplot                  xyplot and dotplot with Matrix Variables to
                        Plot Error Bars and Bands