qiime 1.3.0-3 / usr

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File Mime Type Owner Mode Size
..
/usr/share/python/runtime.d/ root:root 0o755
/usr/lib/ root:root 0o755
/usr/lib/qiime/ root:root 0o755
/usr/lib/qiime/bin/ root:root 0o755
/usr/lib/qiime/bin/uclust text/x-shellscript root:root 0o755 979 bytes
/usr/lib/qiime/bin/add_taxa.py text/x-python root:root 0o755 2.1 KB
/usr/lib/qiime/bin/adjust_seq_orientation.py text/x-python root:root 0o755 2.3 KB
/usr/lib/qiime/bin/align_seqs.py text/x-python root:root 0o755 10.7 KB
/usr/lib/qiime/bin/alpha_diversity.py text/x-python root:root 0o755 5.6 KB
/usr/lib/qiime/bin/alpha_rarefaction.py text/x-python root:root 0o755 5.4 KB
/usr/lib/qiime/bin/ampliconnoise.py text/x-python root:root 0o755 6.2 KB
/usr/lib/qiime/bin/assign_taxonomy.py text/x-python root:root 0o755 10.8 KB
/usr/lib/qiime/bin/beta_diversity.py text/x-python root:root 0o755 7.1 KB
/usr/lib/qiime/bin/beta_diversity_through_3d_plots.py text/x-python root:root 0o755 1.0 KB
/usr/lib/qiime/bin/beta_diversity_through_plots.py text/x-python root:root 0o755 6.9 KB
/usr/lib/qiime/bin/beta_significance.py text/x-python root:root 0o755 6.0 KB
/usr/lib/qiime/bin/blast_wrapper.py text/x-python root:root 0o755 2.4 KB
/usr/lib/qiime/bin/categorized_dist_scatterplot.py text/x-python root:root 0o755 5.7 KB
/usr/lib/qiime/bin/check_id_map.py text/x-python root:root 0o755 6.6 KB
/usr/lib/qiime/bin/cluster_quality.py text/x-python root:root 0o755 3.2 KB
/usr/lib/qiime/bin/collate_alpha.py text/x-python root:root 0o755 5.7 KB
/usr/lib/qiime/bin/compare_3d_plots.py text/x-python root:root 0o755 9.2 KB
/usr/lib/qiime/bin/compare_alpha_diversity.py text/x-python root:root 0o755 3.1 KB
/usr/lib/qiime/bin/compare_distance_matrices.py text/x-python root:root 0o755 3.3 KB
/usr/lib/qiime/bin/consensus_tree.py text/x-python root:root 0o755 3.5 KB
/usr/lib/qiime/bin/convert_otu_table_to_unifrac_sample_mapping.py text/x-python root:root 0o755 1.9 KB
/usr/lib/qiime/bin/convert_unifrac_sample_mapping_to_otu_table.py text/x-python root:root 0o755 1.8 KB
/usr/lib/qiime/bin/core_qiime_analyses.py text/x-python root:root 0o755 8.4 KB
/usr/lib/qiime/bin/count_seqs.py text/x-python root:root 0o755 2.8 KB
/usr/lib/qiime/bin/denoise.py text/x-python root:root 0o755 1.1 KB
/usr/lib/qiime/bin/denoise_wrapper.py text/x-python root:root 0o755 6.0 KB
/usr/lib/qiime/bin/denoiser.py text/x-python root:root 0o755 11.2 KB
/usr/lib/qiime/bin/denoiser_postprocess.py text/x-python root:root 0o755 3.9 KB
/usr/lib/qiime/bin/denoiser_preprocess.py text/x-python root:root 0o755 5.2 KB
/usr/lib/qiime/bin/denoiser_worker.py text/x-python root:root 0o755 3.0 KB
/usr/lib/qiime/bin/dissimilarity_mtx_stats.py text/x-python root:root 0o755 2.7 KB
/usr/lib/qiime/bin/exclude_seqs_by_blast.py text/x-python root:root 0o755 11.8 KB
/usr/lib/qiime/bin/extract_seqs_by_sample_id.py text/x-python root:root 0o755 3.0 KB
/usr/lib/qiime/bin/filter_alignment.py text/x-python root:root 0o755 6.7 KB
/usr/lib/qiime/bin/filter_by_metadata.py text/x-python root:root 0o755 5.0 KB
/usr/lib/qiime/bin/filter_fasta.py text/x-python root:root 0o755 4.5 KB
/usr/lib/qiime/bin/filter_otu_table.py text/x-python root:root 0o755 6.3 KB
/usr/lib/qiime/bin/filter_otus_by_sample.py text/x-python root:root 0o755 3.4 KB
/usr/lib/qiime/bin/filter_tree.py text/x-python root:root 0o755 3.3 KB
/usr/lib/qiime/bin/fix_arb_fasta.py text/x-python root:root 0o755 1.5 KB
/usr/lib/qiime/bin/identify_chimeric_seqs.py text/x-python root:root 0o755 9.9 KB
/usr/lib/qiime/bin/identify_missing_files.py text/x-python root:root 0o755 1.7 KB
/usr/lib/qiime/bin/inflate_denoiser_output.py text/x-python root:root 0o755 3.3 KB
/usr/lib/qiime/bin/jackknifed_beta_diversity.py text/x-python root:root 0o755 6.7 KB
/usr/lib/qiime/bin/make_2d_plots.py text/x-python root:root 0o755 9.7 KB
/usr/lib/qiime/bin/make_3d_plots.py text/x-python root:root 0o755 20.0 KB
/usr/share/ root:root 0o755
/usr/lib/qiime/bin/make_bootstrapped_tree.py text/x-python root:root 0o755 2.1 KB
/usr/lib/qiime/bin/make_distance_histograms.py text/x-python root:root 0o755 11.9 KB
/usr/lib/qiime/bin/make_fastq.py text/x-python root:root 0o755 2.8 KB
/usr/lib/qiime/bin/make_library_id_lists.py text/x-python root:root 0o755 3.7 KB
/usr/lib/qiime/bin/make_otu_heatmap.py text/x-python root:root 0o755 8.1 KB
/usr/lib/qiime/bin/make_otu_heatmap_html.py text/x-python root:root 0o755 9.1 KB
/usr/lib/qiime/bin/make_otu_network.py text/x-python root:root 0o755 7.7 KB
/usr/lib/qiime/bin/make_otu_table.py text/x-python root:root 0o755 3.0 KB
/usr/lib/qiime/bin/make_per_library_sff.py text/x-python root:root 0o755 2.5 KB
/usr/lib/qiime/bin/make_phylogeny.py text/x-python root:root 0o755 4.9 KB
/usr/lib/qiime/bin/make_pie_charts.py text/x-python root:root 0o755 1.2 KB
/usr/lib/qiime/bin/make_prefs_file.py text/x-python root:root 0o755 6.1 KB
/usr/lib/qiime/bin/make_qiime_py_file.py text/x-python root:root 0o755 5.4 KB
/usr/lib/qiime/bin/make_qiime_rst_file.py text/x-python root:root 0o755 9.2 KB
/usr/lib/qiime/bin/make_rarefaction_plots.py text/x-python root:root 0o755 8.8 KB
/usr/lib/qiime/bin/make_tep.py text/x-python root:root 0o755 5.2 KB
/usr/lib/qiime/bin/merge_denoiser_output.py text/x-python root:root 0o755 4.4 KB
/usr/share/doc/ root:root 0o755
/usr/lib/qiime/bin/merge_mapping_files.py text/x-python root:root 0o755 2.2 KB
/usr/lib/qiime/bin/merge_otu_maps.py text/x-python root:root 0o755 3.5 KB
/usr/lib/qiime/bin/merge_otu_tables.py text/x-python root:root 0o755 2.5 KB
/usr/lib/qiime/bin/multiple_rarefactions.py text/x-python root:root 0o755 5.4 KB
/usr/lib/qiime/bin/multiple_rarefactions_even_depth.py text/x-python root:root 0o755 3.3 KB
/usr/lib/qiime/bin/neighbor_joining.py text/x-python root:root 0o755 2.5 KB
/usr/lib/qiime/bin/nmds.py text/x-python root:root 0o755 3.1 KB
/usr/lib/qiime/bin/otu_category_significance.py text/x-python root:root 0o755 18.8 KB
/usr/lib/qiime/bin/parallel_align_seqs_pynast.py text/x-python root:root 0o755 10.3 KB
/usr/lib/qiime/bin/parallel_alpha_diversity.py text/x-python root:root 0o755 8.2 KB
/usr/lib/qiime/bin/parallel_assign_taxonomy_blast.py text/x-python root:root 0o755 10.0 KB
/usr/lib/qiime/bin/parallel_assign_taxonomy_rdp.py text/x-python root:root 0o755 9.5 KB
/usr/lib/qiime/bin/parallel_beta_diversity.py text/x-python root:root 0o755 10.1 KB
/usr/lib/qiime/bin/parallel_blast.py text/x-python root:root 0o755 9.6 KB
/usr/lib/qiime/bin/parallel_identify_chimeric_seqs.py text/x-python root:root 0o755 17.1 KB
/usr/lib/qiime/bin/parallel_multiple_rarefactions.py text/x-python root:root 0o755 8.9 KB
/usr/lib/qiime/bin/parallel_pick_otus_blast.py text/x-python root:root 0o755 10.2 KB
/usr/lib/qiime/bin/parallel_pick_otus_uclust_ref.py text/x-python root:root 0o755 11.6 KB
/usr/lib/qiime/bin/per_library_stats.py text/x-python root:root 0o755 4.6 KB
/usr/lib/qiime/bin/pick_otus.py text/x-python root:root 0o755 23.9 KB
/usr/lib/qiime/bin/pick_otus_through_otu_table.py text/x-python root:root 0o755 5.8 KB
/usr/lib/qiime/bin/pick_reference_otus_through_otu_table.py text/x-python root:root 0o755 5.2 KB
/usr/lib/qiime/bin/pick_rep_set.py text/x-python root:root 0o755 6.1 KB
/usr/lib/qiime/bin/plot_rank_abundance_graph.py text/x-python root:root 0o755 3.9 KB
/usr/lib/qiime/bin/plot_semivariogram.py text/x-python root:root 0o755 4.8 KB
/usr/lib/qiime/bin/plot_taxa_summary.py text/x-python root:root 0o755 13.7 KB
/usr/lib/qiime/bin/poller.py text/x-python root:root 0o755 2.7 KB
/usr/lib/qiime/bin/poller_example.py text/x-python root:root 0o755 5.5 KB
/usr/lib/qiime/bin/pool_by_metadata.py text/x-python root:root 0o755 4.1 KB
/usr/lib/qiime/bin/principal_coordinates.py text/x-python root:root 0o755 3.1 KB
/usr/lib/qiime/bin/print_qiime_config.py text/x-python root:root 0o755 27.0 KB
/usr/lib/qiime/bin/process_iseq.py text/x-python root:root 0o755 4.9 KB
/usr/lib/qiime/bin/process_qseq.py text/x-python root:root 0o755 3.0 KB
/usr/lib/qiime/bin/process_sff.py text/x-python root:root 0o755 2.9 KB
/usr/lib/qiime/bin/quality_scores_plot.py text/x-python root:root 0o755 3.2 KB
/usr/lib/qiime/bin/shared_phylotypes.py text/x-python root:root 0o755 4.0 KB
/usr/lib/qiime/bin/simsam.py text/x-python root:root 0o755 2.1 KB
/usr/lib/qiime/bin/single_rarefaction.py text/x-python root:root 0o755 3.8 KB
/usr/lib/qiime/bin/sort_denoiser_output.py text/x-python root:root 0o755 2.2 KB
/usr/lib/qiime/bin/sort_otu_table.py text/x-python root:root 0o755 3.7 KB
/usr/lib/qiime/bin/split_libraries.py text/x-python root:root 0o755 20.4 KB
/usr/lib/qiime/bin/split_libraries_fastq.py text/x-python root:root 0o755 8.8 KB
/usr/lib/qiime/bin/split_libraries_illumina.py text/x-python root:root 0o755 8.3 KB
/usr/lib/qiime/bin/split_otu_table.py text/x-python root:root 0o755 2.8 KB
/usr/lib/qiime/bin/split_otu_table_by_taxonomy.py text/x-python root:root 0o755 2.4 KB
/usr/lib/qiime/bin/start_parallel_jobs.py text/x-python root:root 0o755 4.5 KB
/usr/lib/qiime/bin/start_parallel_jobs_torque.py text/x-python root:root 0o755 3.2 KB
/usr/lib/qiime/bin/submit_to_mgrast.py text/x-python root:root 0o755 2.8 KB
/usr/lib/qiime/bin/summarize_otu_by_cat.py text/x-python root:root 0o755 3.0 KB
/usr/lib/qiime/bin/summarize_taxa.py text/x-python root:root 0o755 9.4 KB
/usr/lib/qiime/bin/summarize_taxa_through_plots.py text/x-python root:root 0o755 4.8 KB
/usr/lib/qiime/bin/supervised_learning.py text/x-python root:root 0o755 9.1 KB
/usr/lib/qiime/bin/transform_coordinate_matrices.py text/x-python root:root 0o755 5.6 KB
/usr/lib/qiime/bin/tree_compare.py text/x-python root:root 0o755 3.2 KB
/usr/lib/qiime/bin/trflp_file_to_otu_table.py text/x-python root:root 0o755 2.1 KB
/usr/lib/qiime/bin/trim_sff_primers.py text/x-python root:root 0o755 2.5 KB
/usr/lib/qiime/bin/truncate_fasta_qual_files.py text/x-python root:root 0o755 2.7 KB
/usr/lib/qiime/bin/unweight_fasta.py text/x-python root:root 0o755 2.0 KB
/usr/lib/qiime/bin/upgma_cluster.py text/x-python root:root 0o755 2.6 KB
/usr/lib/qiime/shell/ root:root 0o755
/usr/lib/qiime/shell/qiime_environment text/plain root:root 0o644 936 bytes
/usr/lib/qiime/shell/qiime_help text/plain root:root 0o644 1.7 KB
/usr/lib/qiime/shell/.bashrc text/plain root:root 0o644 298 bytes
/usr/lib/qiime/shell/.zshrc text/plain root:root 0o644 256 bytes
/usr/lib/qiime/support_files/ root:root 0o755
/usr/lib/qiime/support_files/denoiser/ root:root 0o755
/usr/lib/qiime/support_files/denoiser/bin/ root:root 0o755
/usr/lib/qiime/support_files/denoiser/bin/FlowgramAli_4frame application/x-executable root:root 0o755 1.1 MB
/usr/bin/ root:root 0o755
/usr/bin/qiime text/x-shellscript root:root 0o755 1.2 KB
/usr/share/doc/qiime/ root:root 0o755
/usr/share/doc/qiime/README text/plain root:root 0o644 2.9 KB
/usr/share/doc/qiime/qiime_parameters.txt text/plain root:root 0o644 3.2 KB
/usr/share/doc/qiime/README.Debian text/plain root:root 0o644 2.2 KB
/usr/share/doc/qiime/copyright text/plain root:root 0o644 623 bytes
/usr/share/doc/qiime/changelog.Debian.gz application/gzip root:root 0o644 1.5 KB
/usr/share/python/ root:root 0o755
/usr/share/python/runtime.d/qiime.rtupdate text/x-shellscript root:root 0o755 125 bytes
/usr/bin/denoiser root:root 0o777

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