/usr/share/arc/Condor.pm is in nordugrid-arc-arex 1.1.1-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 | package Condor;
use POSIX;
@ISA = ('Exporter');
@EXPORT_OK = ('cluster_info',
'queue_info',
'jobs_info',
'users_info');
use LogUtils ( 'start_logging', 'error', 'warning', 'debug' );
use condor_env;
use strict;
##########################################
# Saved private variables
##########################################
# contains the requirements string for the current queue.
# It is used by queue-aware functions
my $qdef = '';
my %config = ();
my $arcconf = $ENV{ARC_CONFIG} ? $ENV{ARC_CONFIG} : '/etc/arc.conf';
my %lrms_queue;
my $lrms_queue_initialized = 0;
my @allnodedata = ();
my $allnodedata_initialized = 0;
my %alljobdata = ();
my $alljobdata_initialized = 0;
my @queuenodes = ();
my $queuenodes_initialized = 0;
my @jobids_thisqueue = ();
my @jobids_otherqueue = ();
##########################################
# Private subs
##########################################
# Runs a command. Returns a list of three values:
#
# [0] String containing stdout.
# [1] String containing stderr.
# [2] Program exit code ($?) that was returned to the shell.
sub condor_run($) {
my $command = shift;
my $stderr_file = "/tmp/condor_run.$$";
my $stdout = `$ENV{CONDOR_BIN_PATH}/$command 2>$stderr_file`;
debug "===condor_run: $command";
my $ret = $? >> 8;
local (*ERROR, $/);
open ERROR, "<$stderr_file";
my $stderr = <ERROR>;
close ERROR;
unlink $stderr_file;
return $stdout, $stderr, $ret;
}
# String containing LRMS version. ('UNKNOWN' in case of errors.)
sub type_and_version() {
my ($out, $err, $ret) = condor_run('condor_version');
return 'UNKNOWN' if $ret != 0;
$out =~ /\$CondorVersion:\s+(\S+)/;
my $version = $1 || 'UNKNOWN';
my $type = 'Condor';
return $type, $version;
}
#
# Helper funtion which collects all the information about condor nodes.
#
sub collect_node_data() {
return if $allnodedata_initialized;
$allnodedata_initialized = 1;
my ($out, $err, $ret) = condor_run("condor_status -long");
error("Failed collecting node information.") if $ret;
for (split /\n\n+/, $out) {
my %target = condor_digest_classad($_);
next unless defined $target{machine};
push @allnodedata, \%target;
}
debug "===collect_node_data: " . join " ", (map { $$_{machine} } @allnodedata);
}
#
# Helper funtion which collects all the information about condor jobs.
#
sub collect_job_data() {
return if $alljobdata_initialized;
$alljobdata_initialized = 1;
my ($out, $err, $ret) = condor_run("condor_q -long -global -constraint 'NiceUser == False'");
return if $out =~ m/All queues are empty/;
error("Failed collecting job information.") if $ret;
for (split /\n\n+/, $out) {
my %job = condor_digest_classad($_);
next unless defined $job{clusterid};
$job{procid} = "0" unless $job{procid};
my $jobid = "$job{clusterid}.$job{procid}";
$alljobdata{$jobid} = \%job;
}
debug "===collect_job_data: " . (join " ", keys %alljobdata);
}
#
# Scans grid-manager's controldir for jobs in LRMS state belonging to a
# queue. Returns a list of their Condor jobids: clusterid.0 (assumes
# procid=0).
#
sub collect_jobids($$) {
my %pairs;
my $qname = shift;
my $controldir = shift;
my $cmd = "find $controldir/processing -maxdepth 1 -name 'job.??????????*.status'";
$cmd .= ' | xargs grep -l INLRMS ';
$cmd .= ' | sed \'s/processing\/job\.\([^\.]*\)\.status$/job.\1.local/\' ';
$cmd .= ' | xargs grep -H "^queue=\|^localid="';
local *LOCAL;
open(LOCAL, "$cmd |");
while (<LOCAL>) {
m#/job\.(\d{10,})\.local:queue=(\S+)# && ($pairs{$1}{queue} = $2);
m#/job\.(\d{10,})\.local:localid=(\S+)# && ($pairs{$1}{id} = $2);
}
close LOCAL;
foreach my $pair (values %pairs) {
# get rid of .condor from localid.
$$pair{id} =~ s/(.*)\.condor$/$1.0/;
if ( $$pair{queue} eq $qname ) {
push @jobids_thisqueue, $$pair{id};
} else {
push @jobids_otherqueue, $$pair{id};
}
}
debug "===collect_jobids: thisqueue: @jobids_thisqueue";
debug "===collect_jobids: otherqueue: @jobids_otherqueue";
}
#
# Returns a job's rank (place) in the current queue, or False if job is not in
# current queue. Highest rank is 1. The rank is deduced from jobid, based on
# the assumption that jobs are started sequentially by Condor.
# Input: jobid (of the form: clusterid.0)
#
sub rank($) {
my $id = shift;
my $rank = 0;
# only calculate rank for queued jobs
return 0 unless exists $alljobdata{$id};
return 0 unless $alljobdata{$id}{lc 'JobStatus'} == 1;
foreach (@jobids_thisqueue) {
# only include queued jobs in rank
next unless exists $alljobdata{$_};
next unless $alljobdata{$_}{lc 'JobStatus'} == 1;
$rank++;
last if $id eq $_;
}
#debug "===rank($id) = $rank";
return $rank;
}
#
# Parses long output from condor_q -l
# and condor_status -l into and hash.
# OBS: Field names are lowercased!
# OBS: It removes quotes around strings
#
sub condor_digest_classad($) {
my %classad;
for (split /\n+/, shift) {
next unless /^(\w+)\s*=\s*(.*\S|)\s*$/;
my ($field, $val) = ($1, $2);
$val =~ s/"(.*)"/$1/; # remove quotes, if any
$classad{lc $field} = $val;
}
return %classad;
}
#
# Takes an optional constraint description string and returns the names of the
# nodes which satisfy this contraint. If no constraint is given, returns all
# the nodes in the Condor pool
#
sub condor_grep_nodes {
my $req = shift;
my $cmd = 'condor_status -format "%s\n" Machine';
$cmd .= " -constraint '$req'" if $req;
my ($out, $err, $ret) = condor_run($cmd);
debug "===condor_grep_nodes: ". (join ', ', split /\n/, $out);
return () if $ret;
return split /\n/, $out;
}
#
# Takes one argument:
# 1. The LRMS job id as represented in the GM. (In Condor terms,
# it's <clusterid>.<proc>)
#
# Returns the current status of the job by mapping Condor's JobStatus
# integer into corresponding one-letter codes used by ARC:
#
# 1 (Idle) --> Q (job is queuing, waiting for a node, etc.)
# 2 (Running) --> R (running on a host controlled by the LRMS)
# 2 (Suspended) --> S (an already running job in a suspended state)
# 3 (Removed) --> E (finishing in the LRMS)
# 4 (Completed) --> E (finishing in the LRMS)
# 5 (Held) --> O (other)
#
# If the job couldn't be found, E is returned since it is probably finished.
#
sub condor_get_job_status($) {
my $id = shift;
my %num2letter = qw(1 Q 2 R 3 E 4 E 5 O);
return 'E' unless $alljobdata{$id};
my $s = $alljobdata{$id}{jobstatus};
return 'E' if !defined $s;
$s = $num2letter{$s};
if ($s eq 'R') {
$s = 'S' if condor_job_suspended($id);
}
debug "===condor_get_job_status $id: $s";
return $s;
}
#
# Returns the list of nodes belonging to the current queue
#
sub condor_queue_get_nodes() {
return @queuenodes if $queuenodes_initialized;
$queuenodes_initialized = 1;
@queuenodes = condor_grep_nodes($qdef);
debug "===condor_queue_get_nodes @queuenodes";
return @queuenodes;
}
#
# Count queued jobs (idle or held) within the current queue.
#
sub condor_queue_get_queued() {
my $gridqueued = 0;
my $localqueued = 0;
my $qfactor = condor_queue_get_nodes() / condor_cluster_totalcpus();
for (values %alljobdata) {
my %job = %$_;
# only include jobs which are idle or held
next unless $job{jobstatus} == 1 || $job{jobstatus} == 5;
my $clusterid = "$job{clusterid}.$job{procid}";
if (grep { $_ eq $clusterid } @jobids_thisqueue) {
$gridqueued += 1;
} elsif (grep { $_ eq $clusterid } @jobids_otherqueue) {
# this is a grid job, but in a different queue
} else {
$localqueued += 1;
}
}
# for locally queued jobs, we don't know to which queue it belongs
# try guessing the odds
my $total = $gridqueued + int($localqueued * $qfactor);
debug "===condor_queue_get_queued: $total = $gridqueued+int($localqueued*$qfactor)";
return $total;
}
#
# Counts all queued cpus (idle and held) in the cluster.
# TODO: this counts jobs, not cpus.
sub condor_cluster_get_queued_cpus() {
my $sum = 0;
do {$sum++ if $$_{jobstatus} == 1 || $$_{jobstatus} == 5} for values %alljobdata;
debug "===condor_cluster_get_queued: $sum";
return $sum;
}
#
# Counts all queued jobs (idle and held) in the cluster.
#
sub condor_cluster_get_queued_jobs() {
my $sum = 0;
do {$sum++ if $$_{jobstatus} == 1 || $$_{jobstatus} == 5} for values %alljobdata;
debug "===condor_cluster_get_queued: $sum";
return $sum;
}
#
# Counts all running jobs in the cluster.
# TODO: also counts suspended jobs apparently.
sub condor_cluster_get_running_jobs() {
my $sum = 0;
do {$sum++ if $$_{jobstatus} == 2} for values %alljobdata;
debug "===condor_cluster_get_queued: $sum";
return $sum;
}
#
# Counts nodes in the current queue with state other than 'Unclaimed'
# Every running job is automatically included, plus nodes used
# interactively by their owners
#
sub condor_queue_get_running() {
my @free;
my @qnod = condor_queue_get_nodes();
for (@allnodedata) {
my %node = %$_;
next unless grep { $node{name} =~ /^((vm|slot)\d+@)?$_/i } @qnod;
next unless $node{state} =~ /^Unclaimed/i;
push @free, $node{name};
}
my $running = @qnod - @free;
debug "===condor_queue_get_running: $running; free nodes: ". scalar @free ." (@free)";
return $running;
}
#
# Same as above, but for the whole cluster
#
sub condor_cluster_get_usedcpus() {
my $free = 0;
do {$free += 1 if $$_{state} =~ /^Unclaimed/i} for @allnodedata;
my $used = condor_cluster_totalcpus() - $free;
debug "===condor_cluster_get_usedcpus: $used";
return $used;
}
#
# Counts running jobs (condor JobStatus == 2) submitted by Grid
# into the current queue.
sub condor_queue_get_gridrunning() {
my $sum = 0;
my @qnod = condor_queue_get_nodes();
for (values %alljobdata) {
my %job = %$_;
next unless grep { $job{clusterid} eq $_ } @jobids_thisqueue;
next unless $job{jobstatus} == 2;
my $host = $job{remotehost};
$host = $job{lastremotehost} unless $host;
next unless $host;
# only count job if it's running in the current queue
$sum++ if grep { $host =~ /^((vm|slot)\d+@)?$_/i } @qnod;
}
debug "===condor_queue_get_gridrunning: $sum";
return $sum;
}
#
# returns the total number of nodes in the cluster
#
sub condor_cluster_totalcpus() {
return scalar @allnodedata;
}
#
# This function parses the condor log to see if the job has been suspended.
# (condor_q reports 'R' for running even when the job is suspended, so we need
# to parse the log to be sure that 'R' actually means running.)
#
# Argument: the condor job id
# Returns: true if the job is suspended, and false if it's running.
#
sub condor_job_suspended($) {
my $id = shift;
return 0 unless $alljobdata{$id};
my $logfile = $alljobdata{$id}{lc 'UserLog'};
return 0 unless $logfile;
local *LOGFILE;
open LOGFILE, "<$logfile" or return 0;
my $suspended = 0;
while (my $line = <LOGFILE>) {
$suspended = 1 if $line =~ /Job was suspended\.$/;
$suspended = 0 if $line =~ /Job was unsuspended\.$/;
}
close LOGFILE;
return $suspended;
}
#
# CPU distribution string (e.g., '1cpu:5 2cpu:1').
#
sub cpudistribution {
# List all machines in the pool. Machines with multiple CPUs are listed
# one time for each CPU, with a prefix such as 'slot1@', 'slot2@', etc.
# (or 'vm1@', 'vm2@' in older Condor releases)
my %machines;
$machines{$$_{machine}}++ for @allnodedata;
# Count number of machines with one CPU, number with two, etc.
my %dist;
for (keys %machines) {
$dist{$machines{$_}}++;
}
# Generate CPU distribution string.
my $diststr = '';
for (sort { $a <=> $b } keys %dist) {
$diststr .= ' ' unless $diststr eq '';
$diststr .= "${_}cpu:$dist{$_}";
}
return $diststr;
}
############################################
# Public subs
#############################################
sub cluster_info ($) {
my $config = shift;
my %lrms_cluster;
configure_condor_env(%$config) or die "Condor executables not found\n";
collect_node_data();
collect_job_data();
( $lrms_cluster{lrms_type}, $lrms_cluster{lrms_version} ) = type_and_version();
# not sure how Condor counts RemoteUserCpu and RemoteSysCpu but it should
# not matter anyway since we don't support parallel jobs under Condor
$lrms_cluster{has_total_cputime_limit} = 0;
# Count used/free CPUs and queued jobs in the cluster
# Note: SGE has the concept of "slots", which roughly corresponds to
# concept of "cpus" in ARC (PBS) LRMS interface.
$lrms_cluster{totalcpus} = scalar @allnodedata;
$lrms_cluster{cpudistribution} = cpudistribution();
$lrms_cluster{usedcpus} = condor_cluster_get_usedcpus();
#NOTE: counts jobs, not cpus.
$lrms_cluster{queuedcpus} = condor_cluster_get_queued_cpus();
$lrms_cluster{queuedjobs} = condor_cluster_get_queued_jobs();
$lrms_cluster{runningjobs} = condor_cluster_get_running_jobs();
# List LRMS queues.
# This does not seem to be used in cluster.pl!
@{$lrms_cluster{queue}} = ();
return %lrms_cluster;
}
sub queue_info ($$) {
return %lrms_queue if $lrms_queue_initialized;
$lrms_queue_initialized = 1;
my $config = shift;
my $qname = shift;
$qdef = join "", split /\[separator\]/, ($$config{condor_requirements} || '');
warning("Option 'condor_requirements' is not defined for queue $qname") unless $qdef;
debug("===Requirements for queue $qname: $qdef");
configure_condor_env(%$config) or die "Condor executables not found\n";
collect_node_data();
collect_job_data();
collect_jobids($qname, $$config{controldir});
# Number of available (free) cpus can not be larger that
# free cpus in the whole cluster
my $totalcpus = scalar condor_queue_get_nodes();
my $usedcpus = condor_queue_get_running();
my $queuedcpus = condor_queue_get_queued();
$lrms_queue{freecpus} = $totalcpus - $usedcpus;
$lrms_queue{running} = $usedcpus;
$lrms_queue{totalcpus} = $totalcpus;
$lrms_queue{queued} = $queuedcpus;
# reserve negative numbers for error states
if ($lrms_queue{freecpus}<0) {
warning("lrms_queue{freecpus} = $lrms_queue{freecpus}")
}
# nordugrid-queue-maxrunning
# nordugrid-queue-maxqueuable
# nordugrid-queue-maxuserrun
# nordugrid-queue-mincputime
# nordugrid-queue-defaultcputime
$lrms_queue{maxrunning} = scalar condor_queue_get_nodes();
$lrms_queue{maxqueuable} = 2 * $lrms_queue{maxrunning};
$lrms_queue{maxuserrun} = $lrms_queue{maxrunning};
$lrms_queue{maxwalltime} = '';
$lrms_queue{minwalltime} = '';
$lrms_queue{defaultwallt} = '';
$lrms_queue{maxcputime} = '';
$lrms_queue{mincputime} = '';
$lrms_queue{defaultcput} = '';
$lrms_queue{status} = 1;
return %lrms_queue;
}
sub jobs_info ($$@) {
my $config = shift;
my $qname = shift;
my $jids = shift;
my %lrms_jobs;
queue_info($config, $qname);
foreach my $id ( @$jids ) {
# submit-condor-job might return identifiers of the form ClusterId.condor
# Replace .condor with .0. It is safe to assume that ProcId is 0 because
# we only submit one job at a time.
my $id0 = $id;
$id0 =~ s/(.*)\.condor$/$1.0/;
debug "===jobs_info: Mapping $id to $id0";
if ( $alljobdata{$id0} ) {
my %job = %{$alljobdata{$id0}};
$lrms_jobs{$id}{status} = condor_get_job_status($id0);
$lrms_jobs{$id}{mem} = $job{lc 'ImageSize'};
$lrms_jobs{$id}{walltime} = floor($job{lc 'RemoteWallClockTime'} / 60);
$lrms_jobs{$id}{cputime} = floor(($job{lc 'RemoteUserCpu'} + $job{lc 'RemoteSysCpu'}) / 60);
$lrms_jobs{$id}{nodes} = [$job{lc 'LastRemoteHost'}];
$lrms_jobs{$id}{nodes} = [$job{lc 'RemoteHost'}] if $job{lc 'RemoteHost'};
$lrms_jobs{$id}{reqwalltime} = floor($job{lc 'JobTimeLimit'} / 60); # caller knows these better
$lrms_jobs{$id}{reqcputime} = floor($job{lc 'JobCpuLimit'} / 60); # caller knows these better
$lrms_jobs{$id}{rank} = rank($id0) ? rank($id0) : '';
$lrms_jobs{$id}{comment} = []; # TODO
$lrms_jobs{$id}{cpus} = $job{lc 'CurrentHosts'};
# For queued jobs, unset meanigless values
if ($lrms_jobs{$id}{status} eq 'Q') {
$lrms_jobs{$id}{mem} = '';
$lrms_jobs{$id}{walltime} = '';
$lrms_jobs{$id}{cputime} = '';
}
} else {
# Job probably already finished
debug("===Condor job $id not found. Probably it has finished");
$lrms_jobs{$id}{status} = '';
$lrms_jobs{$id}{mem} = '';
$lrms_jobs{$id}{walltime} = '';
$lrms_jobs{$id}{cputime} = '';
$lrms_jobs{$id}{reqwalltime} = '';
$lrms_jobs{$id}{reqcputime} = '';
$lrms_jobs{$id}{rank} = '';
$lrms_jobs{$id}{nodes} = [];
$lrms_jobs{$id}{comment} = [];
}
}
return %lrms_jobs;
}
sub users_info($$@) {
my $config = shift;
my $qname = shift;
my $accts = shift;
my %lrms_users;
queue_info($config, $qname);
foreach my $u ( @{$accts} ) {
# all users are treated as equals
# there is no maximum walltime/cputime limit in Condor
$lrms_users{$u}{freecpus} = $lrms_queue{freecpus};
$lrms_users{$u}{queuelength} = "$lrms_queue{queued}";
}
return %lrms_users;
}
1;
|