/usr/include/ncbi/ddvmain.h is in libvibrant6-dev 6.1.20110713-3ubuntu2.
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* ===========================================================================
*
* PUBLIC DOMAIN NOTICE
* National Center for Biotechnology Information (NCBI)
*
* This software/database is a "United States Government Work" under the
* terms of the United States Copyright Act. It was written as part of
* the author's official duties as a United States Government employee and
* thus cannot be copyrighted. This software/database is freely available
* to the public for use. The National Library of Medicine and the U.S.
* Government do not place any restriction on its use or reproduction.
* We would, however, appreciate having the NCBI and the author cited in
* any work or product based on this material
*
* Although all reasonable efforts have been taken to ensure the accuracy
* and reliability of the software and data, the NLM and the U.S.
* Government do not and cannot warrant the performance or results that
* may be obtained by using this software or data. The NLM and the U.S.
* Government disclaim all warranties, express or implied, including
* warranties of performance, merchantability or fitness for any particular
* purpose.
*
* ===========================================================================
*
* File Name: ddvmain.h
*
* Author: Patrick Durand
*
* Version Creation Date: 06/19/99
*
* $Revision: 1.44 $
*
* File Description:
*
* Modifications:
* --------------------------------------------------------------------------
* $Log: ddvmain.h,v $
* Revision 1.44 2000/07/17 13:32:33 lewisg
* move DDV_args out of the library
*
* Revision 1.43 2000/07/17 12:38:53 kans
* DDV_myargs is extern in header, instantiated in ddvpanel.c, since it is accessed from that library file
*
* Revision 1.42 2000/07/14 22:24:56 lewisg
* fix scroll, click, visual c++ build bugs. add command line arg parse to ddv
*
* Revision 1.41 2000/07/12 22:22:42 hurwitz
* added delete block to DDV
*
* Revision 1.40 2000/07/10 14:38:07 lewisg
* move seqalign and sequentry data from window to panels
*
* Revision 1.39 2000/07/08 20:43:58 vakatov
* Get all "#include" out of the 'extern "C" { }' scope; other cleanup...
*
* Revision 1.38 2000/07/05 19:23:13 lewisg
* add two panes to ddv, update msvc project files
*
* Revision 1.37 2000/07/05 18:42:16 hurwitz
* added split block function to DDV
*
* Revision 1.36 2000/06/30 22:31:51 hurwitz
* added merge block function for DDV
*
* Revision 1.35 2000/06/27 20:46:38 hurwitz
* fixed bugs with select rectangle, added select row option
*
* Revision 1.34 2000/06/15 17:33:18 hurwitz
* used view seqAlignPtr to get original (bug fix), and started working on left/right/center justify for DDE
*
* Revision 1.33 2000/05/19 13:48:31 hurwitz
* made a version of DDE that doesn't allow aligned gaps, changed wording for adding new rows
*
* Revision 1.32 2000/05/15 23:39:34 lewisg
* shred cblast, add menu items for gapped/ungapped, fix pdbheaders
*
* Revision 1.31 2000/04/26 21:54:27 hurwitz
* added save function to tell AlnMgr about edits made in DDE
*
* Revision 1.30 2000/04/21 23:00:50 hurwitz
* can launch DDE from DDV
*
* Revision 1.29 2000/04/18 19:50:24 lewisg
* add deselect menu item
*
* Revision 1.28 2000/04/17 13:30:43 durand
* removed g_hParent and unused functions DDV_LaunchAlignViewer and DDV_LaunchAlignEditor
*
* Revision 1.27 2000/04/10 21:41:26 lewisg
* move alignment menus into ddv, udv from cn3d
*
* Revision 1.26 2000/04/10 20:58:42 hurwitz
* added GUI controls for DeleteBlock in DDE
*
* Revision 1.25 2000/04/07 16:21:08 hurwitz
* made delete block faster, added delete block to edit menu
*
* Revision 1.24 2000/03/27 22:15:05 lewisg
* add show/hide row dialog
*
* Revision 1.23 2000/03/25 00:22:09 hurwitz
* put DDE_StackPtr in DDV_Main, add to stack inside DDE api's, added insert char, delete char, home and end keyboard control
*
* Revision 1.22 2000/03/14 22:08:21 hurwitz
* undo and redo working properly, restore-original function added
*
* Revision 1.21 2000/03/10 23:01:43 hurwitz
* added undo and redo functions, first pass
*
* Revision 1.20 2000/03/06 22:45:58 hurwitz
* can shift right boundary of an aligned block left and right, DDVRuler updates added
*
* Revision 1.19 2000/03/01 22:49:41 lewisg
* import bioseq, neatlyindex, get rid of dead code
*
* Revision 1.18 2000/02/04 16:05:41 durand
* add click action to select a row
*
* Revision 1.17 2000/01/26 13:38:55 durand
* update the GUI for the editor. Add functions to create the data to be used by the editor
*
* Revision 1.16 2000/01/12 21:52:17 durand
* add import function; update menus when DDV is loaded from Cn3D
*
* Revision 1.15 2000/01/11 15:05:23 durand
* remove network stuff
*
* Revision 1.14 2000/01/10 15:09:45 durand
* Use Entrez instead of ID1
*
* Revision 1.13 1999/12/20 20:20:41 lewisg
* allow cn3d to do color and ddv to do case when both are running
*
* Revision 1.12 1999/12/07 21:40:14 durand
* add mouse modes menu and caret facility for the editor
*
* Revision 1.11 1999/12/03 23:17:23 lewisg
* Patrick's new global update msg, argument passing when launching ddv, experimental editing
*
* Revision 1.10 1999/11/29 15:26:25 durand
* designed a new GUI to fix problems under MacOS, Linux and SGI
*
* Revision 1.9 1999/11/09 17:09:00 durand
* transfer some functions from ddvgraph to ddvcreate, so that ddvcreate remains Vibrant free and can be compiled with BLAST
*
* Revision 1.8 1999/11/03 21:29:48 durand
* add CTRL and SHFT keys for mouse selection. redesign the loader functions of DDV to properly register the message callbacks
*
* Revision 1.7 1999/10/29 14:15:40 durand
* add simple mouse selection functions
*
* Revision 1.6 1999/10/23 14:54:34 durand
* resolve external symbol g_hParent
*
* Revision 1.5 1999/10/22 20:12:47 durand
* add Export command (text, HTML and Phylip formats)
*
* Revision 1.4 1999/10/22 14:19:43 durand
* update the code for the startup functions of DDV drawing panel
*
* Revision 1.3 1999/10/20 13:17:19 durand
* add display for disc. SeqAlign tails
*
* Revision 1.2 1999/10/15 21:57:36 durand
* add a UI for display options
*
* Revision 1.1 1999/09/30 14:10:27 durand
* add ddv to toolkit
*
* Revision 1.7 1999/09/23 19:06:50 lewisg
* increase maxtemp number of cached sequences
*
* Revision 1.6 1999/09/21 14:19:08 durand
* add mouse click management layout
*
* Revision 1.5 1999/09/09 21:55:07 durand
* instantiate the Fle|Close command of DDV
*
* Revision 1.4 1999/07/20 14:58:01 durand
* use the Color Manager to display colored MSA
*
* Revision 1.3 1999/06/30 14:57:21 durand
* update DDV loader functions
*
* Revision 1.2 1999/06/28 22:07:21 durand
* add loader functions and clean the code with Lint and Purify
*
* Revision 1.1 1999/06/19 17:21:07 durand
* add Vibrant DDV code
*
*
*
* ==========================================================================
*/
#ifndef _DDVMAIN_
#define _DDVMAIN_
#include <ncbi.h>
#include <vibrant.h>
#include <ddvopen.h>
#include <pgppop.h>
#include <ddvcolor.h>
#include <ddvcreate.h>
#ifdef __cplusplus
extern "C" {
#endif
/******************************************************************************
ERROR / Information messages from DDV_OPEN module
******************************************************************************/
#define DVV_MSG_M_OK 1
/******************************************************************************
defines
******************************************************************************/
/* maximum number of sequences to hold in memory */
#define DDV_MAXTEMP 500
/*caret style */
#define DDV_CARET_BAR 1
/*mouse mode*/
#define DDV_MOUSEMODE_QUERY 0
#define DDV_MOUSEMODE_SELECT 1
#define DDV_MOUSEMODE_EDIT 2
#define DDV_MOUSEMODE_CREATEBLOCK 3
#define DDV_MOUSEMODE_LAUNCHEDITOR 4
#define DDV_MOUSEMODE_SELECT_ONE_ROW 5
#define DDV_MOUSEMODE_MERGEBLOCKS1 6
#define DDV_MOUSEMODE_MERGEBLOCKS2 7
#define DDV_MOUSEMODE_SPLITBLOCK 8
#define DDV_MOUSEMODE_DELETEBLOCK 9
/*timer control*/
#define DDV_SET_TIMER 1
#define DDV_TEST_TIMER 2
/*action associated with the timer*/
#define DDV_INVAL_REGION 1
#define DDV_NOTHING 2
/******************************************************************************
Data structures
******************************************************************************/
/*used to display the caret (editor mode only)*/
typedef struct ddvcaretinfo{
Int4 old_row;/*zero-based values; display coordinates*/
Int4 old_col;
Int4 new_row;/*zero-based values; display coordinates*/
Int4 new_col;
Uint1 style; /*see DDV_CARET_* defines */
} DDVCaretInfo, PNTR DDVCaretInfoPtr;
/*used to remember the selected row (editor mode only)*/
typedef struct ddveditrowinfo{
Int4 curEditRow;/*zero-based values; row for applying delete, move*/
Int4 curMasterRow;/*zero-based values; this row is the master*/
} DDVEditRowInfo, PNTR DDVEditRowInfoPtr;
typedef struct ddv_global{
DDV_ColorGlobal * colorp;
} DDV_Global, PNTR DDV_GlobalPtr;
typedef struct ddvmenu {
/*file menu*/
MenU File;
IteM FileOpen;/*open file command*/
IteM EntrezOpen;/*open from ID1 command*/
IteM FileClose;/*close file command*/
IteM SaveEdits;/* save changes made in editor*/
IteM FileExport;/*export a seqalign*/
IteM ImportSeq;/* import a sequence */
IteM ImportNucSeqAlign;/* import a nuc SeqAlign */
IteM ImportProtSeqAlign;/* import a prot SeqAlign */
IteM Hide;/* show/hide dialog */
IteM QuitViewer;/*close the viewer*/
/*Edit menu*/
MenU Edit;
IteM DeleteRow;
IteM MoveRowLeft;
IteM MoveRowRight;
IteM LeftBoundaryLeft;
IteM LeftBoundaryRight;
IteM RightBoundaryLeft;
IteM RightBoundaryRight;
IteM DeleteBlock;
IteM CreateBlock;
IteM Prev;
IteM Next;
IteM Orig;
/*Align menu */
MenU Align;
MenU AddRow;
MenU FromFile;
MenU FromNet;
IteM Deselect;
IteM BlastFile;
IteM BlastNet;
/*Options menu*/
MenU Options;
IteM DispStyles;/*display styles*/
ChoicE MouseMode;/*mouse mode (query, selection, edit)*/
ChoicE Justify;/*justify (left, right, center)*/
IteM ShowLowerPanel;
IteM ConfigNet;/*Entrez Network Conf. dlg*/
IteM LaunchEditor;
IteM MergeBlocks;
IteM SplitBlock;
IteM DeleteDDVBlock;
} DdvMenu, PNTR DdvMenuPtr;
typedef struct ddvmsadata {
MsaParaGPopList pgp_l;/*ParaG list*/
Uint2 entityID;/*currently displayed SeqAlign*/
Uint2 itemID;/* */
} DdvMSAData, PNTR DdvMSADataPtr;
typedef struct ddvmainwin {
Boolean UseNetwork;
/*main win menu*/
DdvMenu MainMenu;/*menu command list*/
ButtoN gotoBtn;
TexT gotoValRow;
TexT gotoValCol;
GrouP StatusGroup;
GrouP StatusGroupLower;
Boolean Show_logo;
FonT f1; /*tree fonts used to display the software logo*/
FonT f2;
FonT f3;
/*viewer data used only when AutonomeViewer is TRUE */
Boolean AutonomeViewer;/*viewer is standalone ?*/
WindoW hWndMain;/*handle to the main window*/
PaneL hWndDDV;/*handle of the current DDV panel*/
PaneL hUpperPanel;/*handle of the upper DDV panel (the multiple)*/
PaneL hLowerPanel;/*handle of the DDV panel (the pairwise) */
PrompT InfoPanel;
PrompT UpperInfoPanel;
PrompT LowerInfoPanel;
/*use to open a file*/
UdvFetchSeqEntryProc fetchSepProc;/*function to get a gi over the Network*/
Nlm_ItmActnProc NetCfgMenuProc;
StartNetworkProc NetStartProc;
Boolean EditAllowed; /* editing is allowed */
}DdvMainWin,PNTR DdvMainWinPtr;
typedef struct ddvtimerdata {
Int4 col;/*one-based; disp coord*/
Int4 row;/*one-based; disp coord*/
Int2 delay;
Uint1 status;
Uint1 action;
}DdvTimerData, PNTR DdvTimerDataPtr;
typedef struct ddvmain {
WindoW hParent;
PaneL hWndDDV;/*panel's handle*/
UnDViewerGraphData GrData;/*graphical data*/
DdvMSAData MSA_d;/*data to display*/
DDV_Global Globals;/*shared color data, among others*/
UDV_mouse_select ms;/*mouse selection info*/
DDV_Disp_Opt ddo;
DDVCaretInfo dci;/*caret position and style (editor only)*/
DDVEditRowInfo deri;/*some rows info to apply edit commands*/
DdvTimerData dtd;/*last goto position*/
Uint1 MouseMode;
Uint1 SavedMouseMode;
Uint2 userkey;
Uint2 procid;
Uint2 proctype;
Int4 MasterViewer;/*the viewer launching ddv*/
Boolean bEditor;/*true if use DDV with editor functions*/
DDE_StackPtr dsp;/*data for editor*/
Int4 BlockIndex;/*the first block of merge 2 blocks*/
Int4 SaveCol;/*col where split line is drawn*/
/*SAP list when open a File or fetch an DB entry*/
ValNodePtr vnp_ali;/*SeqAlign List*/
DdvOpenData dod;/*what is open in DDV*/
} DdvMain, PNTR DdvMainPtr;
#define NUMARGS 2
extern Args DDV_myargs[NUMARGS];
#ifdef __cplusplus
}
#endif
#endif /* ndef _DDVMAIN_ */
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