This file is indexed.

/usr/include/trilinos/ConstrainedOptPack_MatrixDecompRangeOrthog.hpp is in libtrilinos-dev 10.4.0.dfsg-1ubuntu2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
// @HEADER
// ***********************************************************************
// 
// Moocho: Multi-functional Object-Oriented arCHitecture for Optimization
//                  Copyright (2003) Sandia Corporation
// 
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
// 
// This library is free software; you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as
// published by the Free Software Foundation; either version 2.1 of the
// License, or (at your option) any later version.
//  
// This library is distributed in the hope that it will be useful, but
// WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
// Lesser General Public License for more details.
//  
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
// USA
// Questions? Contact Roscoe A. Bartlett (rabartl@sandia.gov) 
// 
// ***********************************************************************
// @HEADER

#ifndef MATRIX_DECOMP_RANGE_ORTHOG_H
#define MATRIX_DECOMP_RANGE_ORTHOG_H

#include "ConstrainedOptPack_Types.hpp"
#include "AbstractLinAlgPack_MatrixSymOpNonsing.hpp"

namespace ConstrainedOptPack {

/** \brief Matrix subclass for variable reduction orthogonal matrix </tt>R = Gc(:,con_decomp)'*Y</tt>.
 *
 * This matrix class is used to represent the matrix:
 \verbatim

 R = C*(I + D*D')

 inv(R) =  inv(I + D*D') * inv(C)

        = (I - D * inv(I + D'*D) * D') * inv(C)
                       \______/
                          S
 \endverbatim
 * Above, the expresion for <tt>inv(R)</tt> is derived using the Sherman-Morrison-Woodbury formula.
 * The nonsingular matrix <tt>S = I + D'*D</tt> is setup by the client, along with the basis matrix
 * \c C and the direct sensitivity matrix \c D.
 */
class MatrixDecompRangeOrthog
  : public AbstractLinAlgPack::MatrixOpNonsing // full path needed for doxygen
{
public:

  /** @name Public types */
  //@{
#ifndef DOXYGEN_COMPILE
  /** \brief . */
  typedef Teuchos::RCP<const MatrixOpNonsing>     C_ptr_t;
  /** \brief . */
  typedef Teuchos::RCP<const MatrixOp>                D_ptr_t;
  /** \brief . */
  typedef Teuchos::RCP<const MatrixSymOpNonsing>  S_ptr_t;
#endif
  //@}

  /** @name Constructors/initializers */
  //@{

  /** \brief Constructs uninitialized.
   *
   * Postconditions:<ul>
   * <li> Same as for <tt>this->set_uninitialized()</tt>.
   * </ul>
   */
  MatrixDecompRangeOrthog();

  /// Calls <tt>this->initialize()</tt>.
  MatrixDecompRangeOrthog(
    const C_ptr_t   &C_ptr
    ,const D_ptr_t  &D_ptr
    ,const S_ptr_t  &S_ptr
    );

  /** \brief Initialize the matrix object.
   *
   * @param  C_ptr  [in]
   * @param  D_ptr  [in]
   * @param  S_ptr  [in]
   *
   * Preconditions:<ul>
   * <li> <tt>C_ptr.get() != NULL</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> <tt>D_ptr.get() != NULL</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> <tt>S_ptr.get() != NULL</tt> (throw <tt>std::invalid_argument</tt>)
   * <li> <tt>C_ptr->space_rows().is_compatible(D_ptr->space_cols()) == true</tt>
   *      (throw <tt>VectorSpace::IncompatibleVectorSpaces</tt>)
   * <li> <tt>S_ptr->space_cols().is_compatible(D_ptr->space_rows()) == true</tt>
   *      (throw <tt>VectorSpace::IncompatibleVectorSpaces</tt>)
   * </ul>
   *
   * Postconditions:<ul>
   * <li> <tt>this->C_ptr().get() == C_ptr.get()</tt>
   * <li> <tt>this->D_ptr().get() == D_ptr.get()</tt>
   * <li> <tt>this->S_ptr().get() == S_ptr.get()</tt>
   * <li> <tt>this->space_cols().is_compatible(C_ptr->space_cols())</tt>
   * <li> <tt>this->space_rows().is_compatible(C_ptr->space_rows())</tt>
   * </ul>
   */
  void initialize(
    const C_ptr_t   &C_ptr
    ,const D_ptr_t  &D_ptr
    ,const S_ptr_t  &S_ptr
    );

  /** \brief Make uninitialized.
   *
   * Postconditions:<ul>
   * <li> <tt>this->C_ptr().get() == NULL</tt>
   * <li> <tt>this->D_ptr().get() == NULL</tt>
   * <li> <tt>this->S_ptr().get() == NULL</tt>
   * <li> <tt>this->rows() == 0</tt>
   * <li> <tt>this->cols() == 0</tt>
   * </ul>
   */
  void set_uninitialized();

  //@}

  /** @name Access */
  //@{

  /** \brief . */
  const C_ptr_t& C_ptr() const;
  /** \brief . */
  const D_ptr_t& D_ptr() const;
  /** \brief . */
  const S_ptr_t& S_ptr() const;

  //@}
  
  /** @name Overridden from MatrixOp */
  //@{

  /** \brief . */
  size_type rows() const;
  /** \brief . */
  size_type cols() const;
  /** \brief . */
  const VectorSpace& space_cols() const;
  /** \brief . */
  const VectorSpace& space_rows() const;
  /** \brief . */
  std::ostream& output(std::ostream& out) const;
  /** \brief . */
  void Vp_StMtV(
    VectorMutable* v_lhs, value_type alpha, BLAS_Cpp::Transp trans_rhs1
    , const Vector& v_rhs2, value_type beta ) const;

  //@}

  /** @name Overridden from MatrixOpNonsing */
  //@{

  /** \brief . */
  void V_InvMtV(
    VectorMutable* v_lhs, BLAS_Cpp::Transp trans_rhs1
    , const Vector& v_rhs2 ) const;

  //@}

private:

#ifdef DOXYGEN_COMPILE
  AbstractLinAlgPack::MatrixOpNonsing      *C;
  AbstractLinAlgPack::MatrixOp                 *D;
  AbstractLinAlgPack::MatrixSymOpNonsing   *S;
#else
  C_ptr_t    C_ptr_;
  D_ptr_t    D_ptr_;
  S_ptr_t    S_ptr_;
#endif

  //
  void assert_initialized(const char func_name[]) const;

  // not defined and not to be called
  MatrixDecompRangeOrthog(const MatrixDecompRangeOrthog&);
  MatrixDecompRangeOrthog& operator=(const MatrixDecompRangeOrthog&);

}; // end class MatrixDecompRangeOrthog

// /////////////////////////////////
// Inline members

inline
const MatrixDecompRangeOrthog::C_ptr_t&
MatrixDecompRangeOrthog::C_ptr() const
{
  return C_ptr_;
}

inline
const MatrixDecompRangeOrthog::D_ptr_t&
MatrixDecompRangeOrthog::D_ptr() const
{
  return D_ptr_;
}

inline
const MatrixDecompRangeOrthog::S_ptr_t&
MatrixDecompRangeOrthog::S_ptr() const
{
  return S_ptr_;
}

} // end namespace ConstrainedOptPack

#endif // MATRIX_DECOMP_RANGE_ORTHOG_H