/usr/include/rheolef/csr-algo-amub.h is in librheolef-dev 5.93-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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# define _SKIT_CSR_ALGO_AMUB_H
///
/// This file is part of Rheolef.
///
/// Copyright (C) 2000-2009 Pierre Saramito <Pierre.Saramito@imag.fr>
///
/// Rheolef is free software; you can redistribute it and/or modify
/// it under the terms of the GNU General Public License as published by
/// the Free Software Foundation; either version 2 of the License, or
/// (at your option) any later version.
///
/// Rheolef is distributed in the hope that it will be useful,
/// but WITHOUT ANY WARRANTY; without even the implied warranty of
/// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
/// GNU General Public License for more details.
///
/// You should have received a copy of the GNU General Public License
/// along with Rheolef; if not, write to the Free Software
/// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
///
/// =========================================================================
//
// CSR: Compressed Sparse Row format
//
// algorithm-oriented generic library
// inspired from sparskit2 fortran library
//
// author: Pierre.Saramito@imag.fr
//
// date: 12 november 1997
//
//@!\vfill\listofalgorithms
/*@!
\vfill \pagebreak \mbox{} \vfill \begin{algorithm}[h]
\caption{{\tt xmub\_size}: sparse size of $y=x^T*b$, where $x$ is a sparse vector.}
\begin{algorithmic}
\INPUT {the sparse matrix and vector patterns}
jx(0:nnzx-1), ib(0:nrowb), jb(0:nnzb-1)
\ENDINPUT
\OUTPUT {number of non-null elements in $y=x^T*b$}
nnzy
\ENDOUTPUT
\BEGIN
set {\cal y} := $\emptyset$ \\
\FORTO {p := 0} {nnzx-1}
i := jx(p) \\
\FORTO {q := ib(i)} {ib(i+1)-1}
{\cal y} := {\cal y} $\cup$ \{ jb(q) \}
\ENDFOR
\ENDFOR
nnzy := {\rm card} ({\cal y})
\END
\end{algorithmic} \end{algorithm}
\vfill \pagebreak \mbox{} \vfill
*/
namespace rheolef {
template <
class InputIterator1,
class InputIterator2,
class RandomAcessIterator,
class Size>
inline
Size
xmub_size (
InputIterator1 jx,
InputIterator1 last_jx,
RandomAcessIterator ib,
InputIterator2 jb,
const Size&)
{
std::set<Size,std::less<Size> > y;
while (jx != last_jx) {
Size i = *jx++;
InputIterator2 jb1 = jb + ib[i];
InputIterator2 jb2 = jb + ib[i+1];
typename std::set<Size,std::less<Size> >::iterator iter_y = y.begin();
while (jb1 != jb2)
iter_y = y.insert(iter_y, *jb1++);
}
return y.size();
}
/*@!
\vfill \pagebreak \mbox{} \vfill \begin{algorithm}[h]
\caption{{\tt xmub}: compute $y=x^T*b$ where $x$ is a sparse vector.}
\begin{algorithmic}
\INPUT {the sparse vector and matrix}
jx(0:nnzx-1), x(0:nnzx-1), ib(0:nrowb), jb(0:nnzb-1), b(0:nnzb-1)
\ENDINPUT
\OUTPUT {the sparse vector $y=x^T*b$}
jy(0:nnzy-1), y(0:nnzy-1)
\ENDOUTPUT
\NOTE {complexity in ${\cal O}(nnzy \log (nnzy))$}
Could be decreased in ${\cal O}(nnzy)$, with an additional
working array of size max(nrowa,nrowb).
Usefull during the sparse product $a*b$.
See sparskit2 implementation.
\ENDNOTE
\BEGIN
map y := $\emptyset$ \\
\FORTO {p := 0} {nnzx-1}
i := jx(p) \\
\FORTO {q := ib(i)} {ib(i+1)-1}
y := y + \{ (jb(q), x(p)*b(q)) \}
\ENDFOR
\ENDFOR
\FORTO {r := 0} {card(y)-1}
jy (r) := y(r).first \\
y (r) := y(r).second
\ENDFOR
\END
\end{algorithmic} \end{algorithm}
\vfill \pagebreak \mbox{} \vfill
*/
template <
class InputIterator1,
class InputIterator2,
class InputIterator3,
class InputIterator4,
class RandomAccessIterator,
class OutputIterator1,
class OutputIterator2,
class Size,
class T>
inline
Size
xmub (
InputIterator1 jx,
InputIterator1 last_jx,
InputIterator2 x,
RandomAccessIterator ib,
InputIterator3 jb,
InputIterator4 b,
OutputIterator1 jy,
OutputIterator2 y,
const Size&,
const T&)
{
typename std::map<Size,T,std::less<Size> > yy;
typename std::map<Size,T,std::less<Size> >::iterator pred_y, iter_y;
while (jx != last_jx) {
Size i = *jx++;
T lambda = *x++;
iter_y = yy.begin();
InputIterator3 jb1 = jb + ib[i];
InputIterator3 jb2 = jb + ib[i+1];
InputIterator4 b1 = b + ib[i];
while (jb1 != jb2) {
Size j = *jb1++;
T yval = lambda*(*b1++);
pred_y = yy.find(j);
if (pred_y == yy.end()) {
yy.insert(iter_y, std::pair<const Size, T>(j, yval));
} else {
iter_y = pred_y;
(*iter_y).second += yval;
}
}
}
for (iter_y = yy.begin(); iter_y != yy.end(); iter_y++) {
*jy++ = (*iter_y).first;
*y++ = (*iter_y).second;
}
return yy.size();
}
/*@!
\vfill \pagebreak \mbox{} \vfill \begin{algorithm}[h]
\caption{{\tt amub\_size}: sparse size of $c=a*b$.}
\begin{algorithmic}
\INPUT {the sparse matrix patterns}
ia(0:nrowa), ja(0:nnza-1), ib(0:nrowb), jb(0:nnzb-1)
\ENDINPUT
\OUTPUT {sparse size of $c=a*b$}
nnzc
\ENDOUTPUT
\BEGIN
nnzc := 0 \\
\FORTO {i := 0} {nrowa-1}
nnzc += xmua\_size(ja(ia(i):ia(i+1)-1), ib, jb)
\ENDFOR
\END
\end{algorithmic} \end{algorithm}
\vfill \pagebreak \mbox{} \vfill
*/
template <
class InputIterator1,
class InputIterator2,
class InputIterator3,
class RandomAcessIterator,
class Size>
Size
amub_size (
InputIterator1 ia,
InputIterator1 last_ia,
InputIterator2 ja,
RandomAcessIterator ib,
InputIterator3 jb,
const Size&)
{
Size nnzc = 0;
InputIterator2 first_ja = ja + *ia++;
while (ia != last_ia) {
InputIterator2 last_ja = ja + *ia++;
nnzc += xmub_size (first_ja, last_ja, ib, jb, nnzc);
first_ja = last_ja;
}
return nnzc;
}
/*@!
\vfill \pagebreak \mbox{} \vfill \begin{algorithm}[h]
\caption{{\tt amub}: compute $c=a*b$.}
\begin{algorithmic}
\INPUT {the sparse matrix $a,b$ and $ic$ pointers}
ia(0:nrowa), ja(0:nnza-1), a(0:nnza-1),
ib(0:nrowb), jb(0:nnzb-1), b(0:nnzb-1)
ic(0:nrowa)
\ENDINPUT
\OUTPUT {the sparse matrix $c=a*b$}
jc(0:nnzc-1), c(0:nnzc-1)
\ENDOUTPUT
\BEGIN
ic (0) := 0;
\FORTO {i := 0} {nrowa-1}
jx := ja(ia(i):ia(i+1)-1) \\
x := a(ia(i):ia(i+1)-1) \\
jz := jc(ic(i):ic(i+1)-1) \\
z := c(ic(i):ic(i+1)-1) \\
ic(i+1) := ic(i) + xmub (jx, x, ib, ib, b, jz, z)
\ENDFOR
\END
\end{algorithmic} \end{algorithm}
\vfill \pagebreak \mbox{} \vfill
*/
template <
class InputIterator1,
class InputIterator2,
class InputIterator3,
class InputIterator4,
class InputIterator5,
class RandomAcessIterator,
class OutputIterator1,
class OutputIterator2,
class OutputIterator3,
class Size,
class T>
Size
amub (
InputIterator1 ia,
InputIterator1 last_ia,
InputIterator2 ja,
InputIterator3 a,
RandomAcessIterator ib,
InputIterator4 jb,
InputIterator5 b,
OutputIterator1 ic,
OutputIterator2 jc,
OutputIterator3 c,
const Size&,
const T&)
{
Size a_offset = *ia++;
InputIterator2 first_ja = ja + a_offset;
InputIterator3 first_a = a + a_offset;
Size nnzc = *ic++ = 0;
OutputIterator2 first_jc = jc + nnzc;
OutputIterator3 first_c = c + nnzc;
while (ia != last_ia) {
a_offset = *ia++;
InputIterator2 last_ja = ja + a_offset;
nnzc += xmub (first_ja, last_ja, first_a, ib, jb, b,
first_jc, first_c, Size(), T());
*ic++ = nnzc;
first_ja = last_ja;
first_a = a + a_offset;
first_jc = jc + nnzc;
first_c = c + nnzc;
}
return nnzc;
}
//@!\vfill
}// namespace rheolef
#endif // _SKIT_CSR_ALGO_AMUB_H
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