This file is indexed.

/usr/include/InsightToolkit/Algorithms/itkMeanSquaresPointSetToImageMetric.h is in libinsighttoolkit3-dev 3.20.1-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    itkMeanSquaresPointSetToImageMetric.h
  Language:  C++
  Date:      $Date$
  Version:   $Revision$

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkMeanSquaresPointSetToImageMetric_h
#define __itkMeanSquaresPointSetToImageMetric_h

#include "itkPointSetToImageMetric.h"
#include "itkCovariantVector.h"
#include "itkPoint.h"


namespace itk
{

/** \class MeanSquaresPointSetToImageMetric
 * \brief Computes similarity between pixel values of a point set and 
 * intensity values of an image.
 *
 * This metric computes the average squared differences between pixels
 * in the point set and the transformed set of pixels.
 *
 * Spatial correspondance between both images is established through a 
 * Transform. 
 *
 * \ingroup RegistrationMetrics
 */
template < class TFixedPointSet, class TMovingImage > 
class ITK_EXPORT MeanSquaresPointSetToImageMetric : 
    public PointSetToImageMetric< TFixedPointSet, TMovingImage>
{
public:

  /** Standard class typedefs. */
  typedef MeanSquaresPointSetToImageMetric                     Self;
  typedef PointSetToImageMetric<TFixedPointSet, TMovingImage > Superclass;
  typedef SmartPointer<Self>                                   Pointer;
  typedef SmartPointer<const Self>                             ConstPointer;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);
 
  /** Run-time type information (and related methods). */
  itkTypeMacro(MeanSquaresPointSetToImageMetric, Object);

 
  /** Types transferred from the base class */
  typedef typename Superclass::RealType                   RealType;
  typedef typename Superclass::TransformType              TransformType;
  typedef typename Superclass::TransformPointer           TransformPointer;
  typedef typename Superclass::TransformParametersType    TransformParametersType;
  typedef typename Superclass::TransformJacobianType      TransformJacobianType;
  typedef typename Superclass::GradientPixelType          GradientPixelType;
  typedef typename Superclass::InputPointType             InputPointType;
  typedef typename Superclass::OutputPointType            OutputPointType;

  typedef typename Superclass::MeasureType                MeasureType;
  typedef typename Superclass::DerivativeType             DerivativeType;
  typedef typename Superclass::FixedPointSetType          FixedPointSetType;
  typedef typename Superclass::MovingImageType            MovingImageType;
  typedef typename Superclass::FixedPointSetConstPointer  FixedPointSetConstPointer;
  typedef typename Superclass::MovingImageConstPointer    MovingImageConstPointer;

  typedef typename Superclass::PointIterator              PointIterator;
  typedef typename Superclass::PointDataIterator          PointDataIterator;


  /** Get the derivatives of the match measure. */
  void GetDerivative( const TransformParametersType & parameters,
                      DerivativeType & Derivative ) const;

  /**  Get the value for single valued optimizers. */
  MeasureType GetValue( const TransformParametersType & parameters ) const;

  /**  Get value and derivatives for multiple valued optimizers. */
  void GetValueAndDerivative( const TransformParametersType & parameters,
                              MeasureType& Value, DerivativeType& Derivative ) const;

protected:
  MeanSquaresPointSetToImageMetric();
  virtual ~MeanSquaresPointSetToImageMetric() {};

private:
  MeanSquaresPointSetToImageMetric(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented

};

} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkMeanSquaresPointSetToImageMetric.txx"
#endif

#endif