/usr/lib/emboss/include/ajseqabi.h is in emboss-lib 6.3.1-6ubuntu3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 | #ifdef __cplusplus
extern "C"
{
#endif
#ifndef ajseqabi_h
#define ajseqabi_h
/*
** Prototype definitions
*/
ajint ajSeqABIGetBaseOffset(AjPFile fp);
void ajSeqABIGetBasePosition(AjPFile fp,ajlong numBases,
AjPShort* basePositions);
ajint ajSeqABIGetBasePosOffset(AjPFile fp);
float ajSeqABIGetBaseSpace(AjPFile fp);
ajint ajSeqABIGetConfidOffset(AjPFile fp);
void ajSeqABIGetData(AjPFile fp,const ajlong *Offset,ajlong numPoints,
AjPInt2d trace);
ajint ajSeqABIGetFWO(AjPFile fp);
ajint ajSeqABIGetNBase(AjPFile fp);
ajint ajSeqABIGetNData(AjPFile fp);
ajint ajSeqABIGetPrimerOffset(AjPFile fp);
ajint ajSeqABIGetPrimerPosition(AjPFile fp);
void ajSeqABIGetSignal(AjPFile fp,ajlong fwo_,
ajshort *sigC,ajshort *sigA,
ajshort *sigG,ajshort *sigT);
AjBool ajSeqABIGetTraceOffset(AjPFile fp, ajlong *Offset);
AjBool ajSeqABIMachineName(AjPFile fp,AjPStr *machine);
AjBool ajSeqABIReadConfid(AjPFile fp,ajlong pconO,ajlong numBases,
float *Pqual);
AjBool ajSeqABIReadSeq(AjPFile fp,ajlong baseO,ajlong numBases,
AjPStr* nseq);
AjBool ajSeqABISampleName(AjPFile fp, AjPStr *sample);
AjBool ajSeqABITest(AjPFile fp);
/*
** End of prototype definitions
*/
#endif
#ifdef __cplusplus
}
#endif
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