This file is indexed.

/usr/lib/emboss/include/ajpdbio.h is in emboss-lib 6.3.1-6ubuntu3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
/****************************************************************************
**
** @source ajpdbio.h
** 
** Prototypes of functions for reading and writing PDB format.  
** For use with Pdb object defined in ajpdb.h
** 
** @author: Copyright (C) 2004 Jon Ison (jison@hgmp.mrc.ac.uk) 
** @version 1.0 
** @@
** 
** This library is free software; you can redistribute it and/or
** modify it under the terms of the GNU Library General Public
** License as published by the Free Software Foundation; either
** version 2 of the License, or (at your option) any later version.
** 
** This library is distributed in the hope that it will be useful,
** but WITHOUT ANY WARRANTY; without even the implied warranty of
** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
** Library General Public License for more details.
** 
** You should have received a copy of the GNU Library General Public
** License along with this library; if not, write to the
** Free Software Foundation, Inc., 59 Temple Place - Suite 330,
** Boston, MA  02111-1307, USA.
****************************************************************************/

#ifdef __cplusplus
extern "C"
{
#endif

#ifndef ajpdbio_h
#define ajpdbio_h




/*
** Prototype definitions
*/

/* ======================================================================= */
/* =========================== Pdb object ================================ */
/* ======================================================================= */
AjPPdb ajPdbReadRawNew(AjPFile inf, const AjPStr pdbid, ajint min_chain_size, 
		       ajint max_mismatch, ajint max_trim, AjBool camask, 
		       AjBool camask1, AjBool atommask, AjPFile flog);

AjBool  ajPdbWriteAllRaw(ajint mode, const AjPPdb pdb, AjPFile outf, 
			  AjPFile errf);

AjBool  ajPdbWriteDomainRaw(ajint mode, const AjPPdb pdb, const AjPScop scop, 
			     AjPFile outf, AjPFile errf); 

AjBool  ajPdbWriteRecordRaw(ajint mode, const AjPPdb pdb, ajint mod, 
			     ajint chn, AjPFile outf, AjPFile errf); 

AjBool  ajPdbWriteDomainRecordRaw(ajint mode, const AjPPdb pdb, ajint mod,
				  const AjPScop scop,
				  AjPFile outf, AjPFile errf);

/*
** End of prototype definitions
*/

#endif

#ifdef __cplusplus
}
#endif