/usr/share/doc/t-coffee-examples/sample_profile2.aln is in t-coffee-examples 8.99-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 | CLUSTAL FORMAT for T-COFFEE Version_2.36, CPU=0.26 sec, SCORE=58, Nseq=2, Len=180
sequence4 AGVGTVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTN
4pep --IGDEPLENYL-DTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSS
:* *: :* * **:* : ****.:.*.: ******:**:.*. *:.
sequence4 CG-SGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLI
4pep LACSDHNQFNPDDSSTFEATSQELSITYGTGS-MTGILGYDTVQVGGISD
. *.:.:::*::***::* .: **:** ** :***. *.*::**:
sequence4 KGQTIELAKREAASFAS-GPNDGLLGLGFDTITTVRGVKTPMDNLISQGL
4pep TNQIFGLSETEPGSFLYYAPFDGILGLAYPSISA-SGATPVFDNLWDQGL
..* : *:: *..** .* **:***.: :*:: *... :*** .***
sequence4 ISRPIFGVYLGKAKNGGGGEYIFGGYDSTK
4pep VSQDLFSVYLS-SNDDSGSVVLLGGIDSSY
:*: :*.***. :::..*. ::** **:
|