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/usr/ is in ruby-bio 1.4.2-2.

This file is owned by root:root, with mode 0o755.

File Mime Type Owner Mode Size
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/usr/lib/ruby/vendor_ruby/bio/sequence/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/br_bioflat text/x-ruby root:root 0o755 7.2 KB
/usr/bin/br_pmfetch text/x-ruby root:root 0o755 9.9 KB
/usr/bin/bioruby text/x-ruby root:root 0o755 979 bytes
/usr/bin/br_biogetseq text/x-ruby root:root 0o755 799 bytes
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/usr/lib/ root:root 0o755
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/usr/lib/ruby/vendor_ruby/bio/util/color_scheme.rb text/x-ruby root:root 0o644 4.9 KB
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/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme.rb text/x-c++ root:root 0o644 8.1 KB
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/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme/range/horizontal_cut_range.rb text/x-c++ root:root 0o644 1.8 KB
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/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme/range/sequence_range/fragment.rb text/x-c++ root:root 0o644 1.2 KB
/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme/single_strand.rb text/x-c++ root:root 0o644 6.6 KB
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/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme/double_stranded/cut_locations_in_enzyme_notation.rb text/x-c++ root:root 0o644 3.2 KB
/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme/double_stranded/cut_location_pair.rb text/x-c++ root:root 0o644 2.9 KB
/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme/double_stranded/aligned_strands.rb text/x-c++ root:root 0o644 4.2 KB
/usr/lib/ruby/vendor_ruby/bio/util/restriction_enzyme/dense_int_array.rb text/x-c++ root:root 0o644 4.2 KB
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/usr/lib/ruby/vendor_ruby/bio/command.rb text/x-ruby root:root 0o644 23.4 KB
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/usr/lib/ruby/vendor_ruby/bio/sequence/compat.rb text/x-c++ root:root 0o644 3.7 KB
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/usr/lib/ruby/vendor_ruby/bio/sequence/format.rb text/x-c++ root:root 0o644 10.5 KB
/usr/lib/ruby/vendor_ruby/bio/sequence/sequence_masker.rb text/x-c++ root:root 0o644 2.9 KB
/usr/lib/ruby/vendor_ruby/bio/feature.rb text/x-c++ root:root 0o644 3.9 KB
/usr/lib/ruby/vendor_ruby/bio/tree.rb text/x-ruby root:root 0o644 25.9 KB
/usr/lib/ruby/vendor_ruby/bio/location.rb text/x-c++ root:root 0o644 26.4 KB
/usr/lib/ruby/vendor_ruby/bio/alignment.rb text/x-ruby root:root 0o644 73.5 KB
/usr/lib/ruby/vendor_ruby/bio/db.rb text/x-c++ root:root 0o644 8.1 KB
/usr/lib/ruby/vendor_ruby/bio/sequence.rb text/x-c++ root:root 0o644 15.8 KB
/usr/lib/ruby/vendor_ruby/bio/io/keggapi.rb text/x-c++ root:root 0o644 10.0 KB
/usr/lib/ruby/vendor_ruby/bio/io/pubmed.rb text/x-c++ root:root 0o644 6.1 KB
/usr/lib/ruby/vendor_ruby/bio/io/higet.rb text/x-c++ root:root 0o644 1.3 KB
/usr/lib/ruby/vendor_ruby/bio/io/ensembl.rb text/x-c++ root:root 0o644 5.7 KB
/usr/lib/ruby/vendor_ruby/bio/io/soapwsdl.rb text/x-c++ root:root 0o644 2.3 KB
/usr/lib/ruby/vendor_ruby/bio/io/ncbirest.rb text/x-c++ root:root 0o644 27.4 KB
/usr/lib/ruby/vendor_ruby/bio/io/ncbisoap.rb text/x-c++ root:root 0o644 3.8 KB
/usr/lib/ruby/vendor_ruby/bio/io/sql.rb text/x-ruby root:root 0o644 2.6 KB
/usr/lib/ruby/vendor_ruby/bio/io/fetch.rb text/x-ruby root:root 0o644 6.5 KB
/usr/lib/ruby/vendor_ruby/bio/io/togows.rb text/x-ruby root:root 0o644 13.6 KB
/usr/lib/ruby/vendor_ruby/bio/io/registry.rb text/x-c++ root:root 0o644 7.4 KB
/usr/lib/ruby/vendor_ruby/bio/io/ddbjrest.rb text/x-c++ root:root 0o644 12.7 KB
/usr/lib/ruby/vendor_ruby/bio/io/ebisoap.rb text/x-c++ root:root 0o644 3.0 KB
/usr/lib/ruby/vendor_ruby/bio/io/flatfile/ root:root 0o755
/usr/lib/ruby/vendor_ruby/bio/io/flatfile/bdb.rb text/x-ruby root:root 0o644 5.5 KB
/usr/lib/ruby/vendor_ruby/bio/io/flatfile/indexer.rb text/x-ruby root:root 0o644 26.8 KB
/usr/lib/ruby/vendor_ruby/bio/io/flatfile/splitter.rb text/x-ruby root:root 0o644 8.2 KB
/usr/lib/ruby/vendor_ruby/bio/io/flatfile/buffer.rb text/x-ruby root:root 0o644 5.8 KB
/usr/lib/ruby/vendor_ruby/bio/io/flatfile/autodetection.rb text/x-ruby root:root 0o644 16.4 KB
/usr/lib/ruby/vendor_ruby/bio/io/flatfile/index.rb text/x-ruby root:root 0o644 33.5 KB
/usr/lib/ruby/vendor_ruby/bio/io/flatfile.rb text/x-ruby root:root 0o644 13.3 KB
/usr/lib/ruby/vendor_ruby/bio/io/hinv.rb text/x-ruby root:root 0o644 11.5 KB
/usr/lib/ruby/vendor_ruby/bio/io/das.rb text/x-c++ root:root 0o644 11.7 KB
/usr/lib/ruby/vendor_ruby/bio/io/ddbjxml.rb text/x-c++ root:root 0o644 10.5 KB
/usr/lib/ruby/vendor_ruby/bio/io/biosql/ root:root 0o755
/usr/lib/ruby/vendor_ruby/bio/io/biosql/config/ root:root 0o755
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/usr/lib/ruby/vendor_ruby/bio/io/biosql/ar-biosql.rb text/x-ruby root:root 0o644 12.4 KB
/usr/lib/ruby/vendor_ruby/bio/io/dbget.rb text/x-c++ root:root 0o644 5.2 KB
/usr/lib/ruby/vendor_ruby/bio/io/fastacmd.rb text/x-c++ root:root 0o644 4.1 KB
/usr/lib/ruby/vendor_ruby/bio/map.rb text/x-ruby root:root 0o644 12.8 KB
/usr/lib/ruby/vendor_ruby/bio/db/ root:root 0o755
/usr/lib/ruby/vendor_ruby/bio/db/rebase.rb text/x-c++ root:root 0o644 13.8 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb/ root:root 0o755
/usr/lib/ruby/vendor_ruby/bio/db/pdb/model.rb text/x-ruby root:root 0o644 3.6 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb/residue.rb text/x-ruby root:root 0o644 4.1 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb/utils.rb text/x-ruby root:root 0o644 10.1 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb/atom.rb text/x-ruby root:root 0o644 1.7 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb/pdb.rb text/x-ruby root:root 0o644 62.5 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb/chain.rb text/x-ruby root:root 0o644 5.6 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb/chemicalcomponent.rb text/x-ruby root:root 0o644 6.7 KB
/usr/lib/ruby/vendor_ruby/bio/db/nbrf.rb text/x-ruby root:root 0o644 5.2 KB
/usr/lib/ruby/vendor_ruby/bio/db/fastq/ root:root 0o755
/usr/lib/ruby/vendor_ruby/bio/db/fastq/fastq_to_biosequence.rb text/x-ruby root:root 0o644 900 bytes
/usr/lib/ruby/vendor_ruby/bio/db/fastq/format_fastq.rb text/x-ruby root:root 0o644 5.4 KB
/usr/lib/ruby/vendor_ruby/bio/db/prosite.rb text/x-c++ root:root 0o644 11.0 KB
/usr/lib/ruby/vendor_ruby/bio/db/fastq.rb text/x-c++ root:root 0o644 18.1 KB
/usr/lib/ruby/vendor_ruby/bio/db/medline.rb text/x-c++ root:root 0o644 7.4 KB
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/usr/lib/ruby/vendor_ruby/bio/db/embl/uniprot.rb text/x-c++ root:root 0o644 951 bytes
/usr/lib/ruby/vendor_ruby/bio/db/embl/sptr.rb text/x-c++ root:root 0o644 40.4 KB
/usr/lib/ruby/vendor_ruby/bio/db/embl/format_embl.rb text/x-ruby root:root 0o644 5.8 KB
/usr/lib/ruby/vendor_ruby/bio/db/embl/embl.rb text/x-c++ root:root 0o644 10.9 KB
/usr/lib/ruby/vendor_ruby/bio/db/embl/common.rb text/x-c++ root:root 0o644 9.5 KB
/usr/lib/ruby/vendor_ruby/bio/db/embl/embl_to_biosequence.rb text/x-ruby root:root 0o644 1.7 KB
/usr/lib/ruby/vendor_ruby/bio/db/embl/swissprot.rb text/x-c++ root:root 0o644 1014 bytes
/usr/lib/ruby/vendor_ruby/bio/db/soft.rb text/x-c++ root:root 0o644 13.9 KB
/usr/lib/ruby/vendor_ruby/bio/db/fantom.rb text/x-ruby root:root 0o644 15.1 KB
/usr/lib/ruby/vendor_ruby/bio/db/genbank/ root:root 0o755
/usr/lib/ruby/vendor_ruby/bio/db/genbank/format_genbank.rb text/x-ruby root:root 0o644 5.4 KB
/usr/lib/ruby/vendor_ruby/bio/db/genbank/genpept.rb text/x-c++ root:root 0o644 1.2 KB
/usr/lib/ruby/vendor_ruby/bio/db/genbank/common.rb text/x-c++ root:root 0o644 7.5 KB
/usr/lib/ruby/vendor_ruby/bio/db/genbank/ddbj.rb text/x-c++ root:root 0o644 411 bytes
/usr/lib/ruby/vendor_ruby/bio/db/genbank/genbank.rb text/x-c++ root:root 0o644 4.1 KB
/usr/lib/ruby/vendor_ruby/bio/db/genbank/refseq.rb text/x-c++ root:root 0o644 380 bytes
/usr/lib/ruby/vendor_ruby/bio/db/genbank/genbank_to_biosequence.rb text/x-ruby root:root 0o644 1.8 KB
/usr/lib/ruby/vendor_ruby/bio/db/pdb.rb text/x-ruby root:root 0o644 594 bytes
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/usr/lib/ruby/vendor_ruby/bio/db/fasta/qual.rb text/x-ruby root:root 0o644 3.4 KB
/usr/lib/ruby/vendor_ruby/bio/db/fasta/qual_to_biosequence.rb text/x-ruby root:root 0o644 758 bytes
/usr/lib/ruby/vendor_ruby/bio/db/fasta/defline.rb text/x-ruby root:root 0o644 16.5 KB
/usr/lib/ruby/vendor_ruby/bio/db/fasta/format_fasta.rb text/x-ruby root:root 0o644 2.9 KB
/usr/lib/ruby/vendor_ruby/bio/db/fasta/format_qual.rb text/x-ruby root:root 0o644 6.2 KB
/usr/lib/ruby/vendor_ruby/bio/db/fasta.rb text/x-ruby root:root 0o644 7.2 KB
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/usr/lib/ruby/vendor_ruby/bio/db/gff.rb text/x-ruby root:root 0o644 59.3 KB
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/usr/lib/ruby/vendor_ruby/bio/db/biosql/sequence.rb text/x-ruby root:root 0o644 17.4 KB
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/usr/lib/ruby/vendor_ruby/bio/db/kegg/keggtab.rb text/x-c++ root:root 0o644 8.9 KB
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/usr/lib/ruby/vendor_ruby/bio/db/kegg/drug.rb text/x-c++ root:root 0o644 2.7 KB
/usr/lib/ruby/vendor_ruby/bio/db/lasergene.rb text/x-c++ root:root 0o644 8.8 KB
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